Nucleotide Global Alignment

Description

• Query: TRCN0000465661
• Subject: XM_017014597.2
• Aligned Length: 1553
• Identities: 963
• Gaps: 529

Alignment

Query    1  ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTC-GT  221
            |||       |||             ||||.|.|||||           ||  |||   |..||..||||| ||
Sbjct    1  ATG-------TGG-------------CCCGGGCTGCAG-----------GA--AAG---CATCTCACCCTCAGT  38

Query  222  CTCCAACGGCTG--CTACGAGGGCA---GCCTC--TCAGAG--GAGCCCAGCATTAGGAA-GCCCGCAGGCGAG  285
            |        |||  ||.||||||||   |.|||  ||.|.|  |.|.|||||   ||.|| ||||         
Sbjct   39  C--------CTGCACTCCGAGGGCACGTGTCTCTGTCTGGGCTGGGGCCAGC---AGCAAGGCCC---------  92

Query  286  GGCCCTCAGC--CTCGAGTGTACAC-CA----TCTCTGGGGAGC----CTGCCC--------TGCTGCCCAGCC  340
              |||||..|  |||.|.|   ||| ||    |.||||||.|||    .|||||        ||.||    |.|
Sbjct   93  --CCCTCCCCCACTCCAAT---CACACAGATGTGTCTGGGAAGCTTTTTTGCCCGTTTTGGATGTTG----GGC  157

Query  341  CTGAGGCGGAGGCCA---TTGAGCTGGCGGTGGTGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAG  411
            || .|||.|.|.|||   ||          |||||.|||.|.||                         .||.|
Sbjct  158  CT-TGGCAGGGTCCAAAGTT----------TGGTGGAGGAGAGG-------------------------ACCTG  195

Query  412  CCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAGGACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCA  485
            ||||||           .||||||             |||  |||.|   .||||||                 
Sbjct  196  CCCCTG-----------AGGTGGC-------------TCA--AGGAC---ACAGAGC-----------------  223

Query  486  GGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCTGGCTCCT----GGCCCCACCCCTCGGGCCTTTGGGCTGGAC  555
                    |||||                ||..|||||||    |.|||||.|||    ||| .||||.|||..
Sbjct  224  --------AGGAG----------------AGGGGGCTCCTGCAGGCCCCCAGCCC----GCC-ATGGGGTGGTG  268

Query  556  CAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGAAGCTGGAGAGGATGTACAGCGTTGA-CCGTGTGTCTG  628
            |||.||          .||.|.|||.||         .||||.||.|.|.|  |||..|.|| ||     ||||
Sbjct  269  CAGACA----------GGAGCCCCGCTC---------TGCTGCAGCGCAGG--CAGGCTGGATCC-----TCTG  316

Query  629  ACGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAATCTTTTCAGCTTCCAGACAGCAACCACAACTATGCAA  702
             |.||||        |..|.|||       |||        .||||                           .
Sbjct  317  -CCACAT--------GGGCGTGG-------AGG--------CTCAG---------------------------G  339

Query  703  GCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGA  776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct  340  GCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCCGGAGGGTGAAGGCCCAG--------------------  393

Query  777  GCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCCATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCA  850
                                                                                  ||||
Sbjct  394  ----------------------------------------------------------------------AGCA  397

Query  851  GTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTG  924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  398  GTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGCCTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTG  471

Query  925  GAGGCTGTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGC  998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  472  GAGGCTGTGGCCTGCGACACCGAAGGCTTCGTGCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGC  545

Query  999  TGAGTACATCCCCACTATCATCCGCCGGGATGACCCCTCCATCATCCCCATCCTCTACGACCATGAGCACGCAA  1072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  546  TGAGTACATCCCCACTATCATCCGCCGGGATGACCCCTCCATCATCCCCATCCTCTACGACCATGAGCACGCAA  619

Query 1073  CCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATG  1146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  620  CCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATG  693

Query 1147  CTGATTTTCTGCCAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGA  1220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  694  CTGATTTTCTGCCAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGA  767

Query 1221  GAAGGAAGAGGACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACG  1294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  768  GAAGGAAGAGGACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACG  841

Query 1295  TCATCCACATCATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTC  1368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  842  TCATCCACATCATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTC  915

Query 1369  ATGACTCCTTATAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTA  1442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  916  ATGACTCCTTATAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTA  989

Query 1443  CTTTGACTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1515
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  990  CTTTGACTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1062