Nucleotide Global Alignment
Description
- Query:
- TRCN0000465661
- Subject:
- XM_017319144.1
- Aligned Length:
- 1690
- Identities:
- 989
- Gaps:
- 596
Alignment
Query 1 ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC 74
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||
Sbjct 1 ATGGGTGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTAGCGGCCAAAGTAAGAGC 74
Query 75 AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||| ||
Sbjct 75 AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGTGCAGA------------TG 136
Query 149 ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTC 222
|| |||||| || |.||.|||.||
Sbjct 137 AT--------------------GTCCCC----AT----------------------------CCGTACCTGGT- 157
Query 223 TCCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAGCC 296
|| |||| ||||
Sbjct 158 TC----------------------------------CCCA-----AGGA------------------------- 167
Query 297 TCGAGTGTACACCATCTCTGGGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG 370
|.|||.|.|| |||.| |||
Sbjct 168 --------AAACCTTTTC-----AGCTT----------CCA--------------------------------- 185
Query 371 TGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAG 444
|.||||| |.||||.|.| |||..||||.|.| |
Sbjct 186 ---------GACGGCA--------------ACCACAACTA-----TGCAAGCCATCTC---------------G 216
Query 445 GACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCT 518
|...|||| |||||.|..|||| .||| |||
Sbjct 217 GTATTCAG---------------------------------GGGCTACGCGGAG-----AGGA-------AGC- 244
Query 519 GGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGA 592
|||| ||
Sbjct 245 --------------------------------------------------------------GTCG------GA 250
Query 593 AGCTGGAGAGGATG-TACAGCGTTGACCGTGTGTCTGACGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAA 665
|.|.||||| ||| |.|.|| ||||| ||
Sbjct 251 AACGGGAGA--ATGATTCCGC-----------GTCTG----------TA------------------------- 276
Query 666 TCTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAGCGAACTTCCGCAAACACCTGCGCATGGTCGGCAGCC 739
.|||||| .|||||||||||||||||||||||||||.|||||.|
Sbjct 277 ----------ATCCAGA---------------------GGAACTTCCGCAAACACCTGCGCATGGTTGGCAGTC 319
Query 740 GGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCC 813
||.||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.
Sbjct 320 GGCGGGTGAAGGCCCAGACGTTCGCTGAGCGTCGCGAACGGAGCTTCAGCCGGTCCTGGAGCGACCCCACCCCT 393
Query 814 ATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGACGAGGC 887
||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.|||||
Sbjct 394 ATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTACAGAGCTCACACTGCACCCTGGATGAGGC 467
Query 888 CTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCTGTGGCCTGCGACACCGAAGGCTTCGTGCCAC 961
.|..||||||||||||||||||||.|||||.||.||||||||..||||||||.|||||||.||||||.||||||
Sbjct 468 TTGTGAGGACCTGGACTGGGACACAGAGAAAGGTCTGGAGGCCATGGCCTGCAACACCGAGGGCTTCTTGCCAC 541
Query 962 CAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATGACCCC 1035
|.||||||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|.||||||||.
Sbjct 542 CCAAGGTCATGCTCATCTCCTCCAAGGTGCCAAAGGCCGAGTATATCCCTACTATCATCCGCAGAGATGACCCG 615
Query 1036 TCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAGAGGAAGCT 1109
||||||||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.|||||||.|||..|
Sbjct 616 TCCATCATTCCCATCCTCTACGACCACGAGCATGCAACCTTCGAGGACATCCTGGAGGAAATAGAGAAGAAATT 689
Query 1110 GAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGC------------------------- 1158
||||.||||.||||||||.||||||||||||||.|||||||||||||||
Sbjct 690 GAACATCTATCACAAGGGGGCCAAGATCTGGAAGATGCTGATTTTCTGCCAGGTAGAAGCAGCCTTTCCTTTCC 763
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 764 TCCCCAGGAAAAGAGGGCAGTGTGGTATGGGTAGGGCCCCAAGATCTTACTCAGTGTGGGCGTGTCCATGTGGT 837
Query 1159 -------------------------------------------------------------------------- 1158
Sbjct 838 ACATTTGTGGACGACATGCACACGCCTCATCCTAGCCTCCCCCTAGCACTCCTGAGGCCTGACCGTGACCTCTT 911
Query 1159 -CAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGG 1231
|||||.||.|||||||||||.|||.|.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 912 TCAGGGCGGCCCTGGACACCTTTATTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGAAGAGG 985
Query 1232 ACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCCACATC 1305
|||||||.||||||||||||.||||||||||||||||||||||.||||||||.||||||||.||||||||||||
Sbjct 986 ACATGATCCACTTCTGGAAGAGGCTGAGCCGCCTGATGAGCAAGGTGAACCCCGAGCCGAATGTCATCCACATC 1059
Query 1306 ATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACTCCTTA 1379
||||||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||||.|||||
Sbjct 1060 ATGGGCTGCTACATTCTGGGGAACCCTAACGGGGAGAAGCTATTCCAGAACCTCAGGACCCTCATGACCCCTTA 1133
Query 1380 TAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGACTTCC 1453
.|.|||.|||||.|||||.||.||.|||||.||.||||||||||||||||||||.|||||.|||||||||||||
Sbjct 1134 CAAGGTTACCTTTGAGTCGCCTCTCGAGCTGTCTGCCCAAGGGAAGCAGATGATTGAGACCTACTTTGACTTCC 1207
Query 1454 GGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG 1515
||.||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1208 GGCTGTACCGCCTGTGGAAGAGCCGCCAGCACTCAAAGCTGCTGGACTTTGATGACGTCCTG 1269
