Nucleotide Global Alignment

Description

Query:
TRCN0000465661
Subject:
XM_017319145.1
Aligned Length:
1695
Identities:
939
Gaps:
675

Alignment

Query    1  ATGGGCGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTGGCGGCCAAAGTGCGAGC  74
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||..||||
Sbjct    1  ATGGGTGCCGCCGCCTCCAGGAGGAGGGCGCTGAGGAGCGAGGCCATGTCCTCGGTAGCGGCCAAAGTAAGAGC  74

Query   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGCGCAGATCACCTGCTGGCTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||            ||
Sbjct   75  AGCCCGAGCGTTTGGAGAGTACCTGTCCCAGAGTCACCCTGAGAACCGCAACGGTGCAGA------------TG  136

Query  149  ATGCCTACTCTGGCCACGACGGGTCCCCCGAGATGCAGCCGGCCCCCCAGAACAAGCGCCGCCTGTCCCTCGTC  222
            |||                                                                       
Sbjct  137  ATG-----------------------------------------------------------------------  139

Query  223  TCCAACGGCTGCTACGAGGGCAGCCTCTCAGAGGAGCCCAGCATTAGGAAGCCCGCAGGCGAGGGCCCTCAGCC  296
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  297  TCGAGTGTACACCATCTCTGGGGAGCCTGCCCTGCTGCCCAGCCCTGAGGCGGAGGCCATTGAGCTGGCGGTGG  370
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  371  TGAAGGGGCGGCGGCAGCGGCACCCTCACCATCACAGCCAGCCCCTGCGCGCCAGCCCTGGTGGCAGCCGGGAG  444
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  445  GACGTCAGCAGGCCCTGCCAGAGCTGGGCGGGCAGCCGCCAGGGCTCCAAGGAGTGCCCCGGATGTGCCCAGCT  518
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  519  GGCTCCTGGCCCCACCCCTCGGGCCTTTGGGCTGGACCAGCCACCTCTGCCTGAGACCTCCGGTCGCCGCAAGA  592
                                                                                      
Sbjct  140  --------------------------------------------------------------------------  139

Query  593  AGCTGGAGAGGATGTACAGCGTTGACCGTGTGTCTGACGACATCCCTATTCGTACCTGGTTCCCCAAGGAAAAT  666
                                                      ||||.||.|||||||||||||||||||||||.
Sbjct  140  ------------------------------------------TCCCCATCCGTACCTGGTTCCCCAAGGAAAAC  171

Query  667  CTTTTCAGCTTCCAGACAGCAACCACAACTATGCAAG------CGAACTTCCGCAAACACCTGCGCATGGTCGG  734
            |||||||||||||||||.|||||||||||||||||||      ||||||||||||||||||||||||||||.||
Sbjct  172  CTTTTCAGCTTCCAGACGGCAACCACAACTATGCAAGCCATCTCGAACTTCCGCAAACACCTGCGCATGGTTGG  245

Query  735  CAGCCGGAGGGTGAAGGCCCAGACGTTCGCTGAGCGGCGCGAGCGGAGCTTCAGCCGGTCCTGGAGCGACCCCA  808
            |||.|||.||||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||
Sbjct  246  CAGTCGGCGGGTGAAGGCCCAGACGTTCGCTGAGCGTCGCGAACGGAGCTTCAGCCGGTCCTGGAGCGACCCCA  319

Query  809  CCCCCATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTGCAGAGCTCCCACTGCACGCTGGAC  882
            ||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||.
Sbjct  320  CCCCTATGAAAGCCGACACTTCCCACGACTCCCGAGACAGCAGTGACCTACAGAGCTCACACTGCACCCTGGAT  393

Query  883  GAGGCCTTCGAGGACCTGGACTGGGACACTGAGAAGGGCCTGGAGGCTGTGGCCTGCGACACCGAAGGCTTCGT  956
            |||||.|..||||||||||||||||||||.|||||.||.||||||||..||||||||.|||||||.||||||.|
Sbjct  394  GAGGCTTGTGAGGACCTGGACTGGGACACAGAGAAAGGTCTGGAGGCCATGGCCTGCAACACCGAGGGCTTCTT  467

Query  957  GCCACCAAAGGTCATGCTCATTTCCTCCAAGGTGCCCAAGGCTGAGTACATCCCCACTATCATCCGCCGGGATG  1030
            ||||||.||||||||||||||.||||||||||||||.|||||.|||||.|||||.||||||||||||.|.||||
Sbjct  468  GCCACCCAAGGTCATGCTCATCTCCTCCAAGGTGCCAAAGGCCGAGTATATCCCTACTATCATCCGCAGAGATG  541

Query 1031  ACCCCTCCATCATCCCCATCCTCTACGACCATGAGCACGCAACCTTCGAGGACATCCTTGAGGAGATAGAGAGG  1104
            ||||.||||||||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.|||||||.|
Sbjct  542  ACCCGTCCATCATTCCCATCCTCTACGACCACGAGCATGCAACCTTCGAGGACATCCTGGAGGAAATAGAGAAG  615

Query 1105  AAGCTGAACGTCTACCACAAGGGAGCCAAGATCTGGAAAATGCTGATTTTCTGC--------------------  1158
            ||..|||||.||||.||||||||.||||||||||||||.|||||||||||||||                    
Sbjct  616  AAATTGAACATCTATCACAAGGGGGCCAAGATCTGGAAGATGCTGATTTTCTGCCAGGTAGAAGCAGCCTTTCC  689

Query 1159  --------------------------------------------------------------------------  1158
                                                                                      
Sbjct  690  TTTCCTCCCCAGGAAAAGAGGGCAGTGTGGTATGGGTAGGGCCCCAAGATCTTACTCAGTGTGGGCGTGTCCAT  763

Query 1159  --------------------------------------------------------------------------  1158
                                                                                      
Sbjct  764  GTGGTACATTTGTGGACGACATGCACACGCCTCATCCTAGCCTCCCCCTAGCACTCCTGAGGCCTGACCGTGAC  837

Query 1159  ------CAGGGAGGTCCTGGACACCTCTATCTCCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGA  1226
                  |||||.||.|||||||||||.|||.|.|||||||||||||||||||||||||||||||||||||||||
Sbjct  838  CTCTTTCAGGGCGGCCCTGGACACCTTTATTTGCTCAAGAACAAGGTGGCCACCTTTGCCAAAGTGGAGAAGGA  911

Query 1227  AGAGGACATGATTCACTTCTGGAAGCGGCTGAGCCGCCTGATGAGCAAAGTGAACCCAGAGCCGAACGTCATCC  1300
            ||||||||||||.||||||||||||.||||||||||||||||||||||.||||||||.||||||||.|||||||
Sbjct  912  AGAGGACATGATCCACTTCTGGAAGAGGCTGAGCCGCCTGATGAGCAAGGTGAACCCCGAGCCGAATGTCATCC  985

Query 1301  ACATCATGGGCTGCTACATTCTGGGGAACCCCAATGGAGAGAAGCTGTTCCAGAACCTCAGGACCCTCATGACT  1374
            |||||||||||||||||||||||||||||||.||.||.||||||||.||||||||||||||||||||||||||.
Sbjct  986  ACATCATGGGCTGCTACATTCTGGGGAACCCTAACGGGGAGAAGCTATTCCAGAACCTCAGGACCCTCATGACC  1059

Query 1375  CCTTATAGGGTCACCTTCGAGTCACCCCTGGAGCTCTCAGCCCAAGGGAAGCAGATGATCGAGACGTACTTTGA  1448
            |||||.|.|||.|||||.|||||.||.||.|||||.||.||||||||||||||||||||.|||||.||||||||
Sbjct 1060  CCTTACAAGGTTACCTTTGAGTCGCCTCTCGAGCTGTCTGCCCAAGGGAAGCAGATGATTGAGACCTACTTTGA  1133

Query 1449  CTTCCGGTTGTATCGCCTGTGGAAGAGCCGCCAGCACTCGAAGCTGCTGGACTTTGACGACGTCCTG  1515
            |||||||.||||.||||||||||||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1134  CTTCCGGCTGTACCGCCTGTGGAAGAGCCGCCAGCACTCAAAGCTGCTGGACTTTGATGACGTCCTG  1200