Nucleotide Global Alignment
Description
- Query:
- TRCN0000465668
- Subject:
- NM_030231.3
- Aligned Length:
- 1635
- Identities:
- 692
- Gaps:
- 846
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAGCGGAGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGAAATGAGGATGCCATTGGAGGGAATGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACAAATACATAGTGCTTCCAAATGGATACTCTGGACAGCCCAAGAAAGGACATCTTACCTTTGATGCTTGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAAGTGGTAACCTCGGCCGGGTTGAGCAAGTCTCTGATTTTGAGTATGATCTGTTCATTAGGCCGGACACC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAATGTGAAAGAATTGCAGAGGGTAATTTTCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTGTTAACTTCAGTAAAACCAAGAGTCTTTACCGAGATGGGATGGCACCAATGGTGAAATCTACCAGCAGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAAAATGGCAAAGACTACCACCAAAAAACGTTTATTACTATCGCTGCCCAGACCACAGGAAGAACTATGTGATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCTTTGCATTCTGTTTTGACCGAGAAGATGATATCTACCAGTTTGCTTACTGCTACCCTTATACATATACTCG 518
Query 1 -------------------------------------ATGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGTG 37
||||||||.|||||.|||||.|||||.||.|||||||
Sbjct 519 CTTCCAGCATTACCTCGACAGCTTACAAAAGAAAAACATGGATTATTTCTTCCGGGAACAGCTTGGACAGAGTG 592
Query 38 TGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGCCCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTG 111
|||||||.||..||||||||||||||||||||||||||||.||.||||||||.||||||.||||..||||||||
Sbjct 593 TGCAACAGCGGCAGCTTGACCTCCTGACGATAACCAGCCCGGAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTG 666
Query 112 GTATTCATCACAGGACGAGTCCACCCAGGGGAAACACCCTCATCATTTGTGTGCCAAGGGATCATTGACTTCCT 185
.|||||||||||||.||||||||||||||||||||.||.||.|||||||||||||||||.|||||.||||||||
Sbjct 667 ATATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCCATCTTCATTTGTGTGCCAAGGAATCATCGACTTCCT 740
Query 186 TGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTG 259
||||||.|||||.||.||||||.|||||||.||.|||.|..|.|||||||||||.||.|||||||||||.||||
Sbjct 741 TGTAAGTCAGCATCCAATTGCCCGTGTCCTACGAGAACATTTAGTCTTCAAGATTGCTCCAATGCTCAACCCTG 814
Query 260 ATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATGGGATTTGATCTGAATCGTCACTGGCTGGATCCCTCT 333
|||||||.|||||||||||.|||||||||||.||||||||.|||||.|||||||||||||||||||||||||||
Sbjct 815 ATGGAGTTTACCTGGGCAACTACAGGTGTTCCCTGATGGGGTTTGACCTGAATCGTCACTGGCTGGATCCCTCT 888
Query 334 CCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAAAAACAAGCCT 407
|||||||.||||||.||||||||||||||||||||.||.||..||.||||||||||.|||||||||||||||||
Sbjct 889 CCATGGGCCCATCCCACCCTGCATGGAGTGAAACAGCTTATTATCAAGATGTACAATGACCCAAAAACAAGCCT 962
Query 408 GGAGTTTTATATTGACATCCATGCCCACTCCACCATGATGAATGGCTTCATGTATGGCAACATCTTTGAGGATG 481
||||||.||||||||||||||.||.|||||||||||||||||||||||||||||.|||||.|||||||||||||
Sbjct 963 GGAGTTCTATATTGACATCCACGCTCACTCCACCATGATGAATGGCTTCATGTACGGCAATATCTTTGAGGATG 1036
Query 482 AGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGC 555
|||||||||||||.||||||.||||||||||.||.|||||.|||||||||||.|||||||||||||||.|.|||
Sbjct 1037 AGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCCTTTGCCAGAATGCCGAGGACTTCTCCTATACTAGC 1110
Query 556 ACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTC 629
||||||||.|||.||||.|||||||||||||||||||||||.||||||||.||.||.||.|||||||||.|.||
Sbjct 1111 ACATCCTTCAACAGGGATGCTGTGAAAGCAGGAACTGGCCGGCGCTTCCTGGGCGGGCTTCTGGACCACTCATC 1184
Query 630 CTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACATCATCAGTGGCACCACGGCTGCTGTGCCCTACACTG 703
.||.|||||.|||||||||||.||||||||||||||||||||..|.||.||.||.|||||.|||||||||||||
Sbjct 1185 ATACTGCTATACCCTAGAGGTTTCCTTCTACAGCTACATCATTGGGGGTACTACAGCTGCAGTGCCCTACACTG 1258
Query 704 AAGAAGCCTGTAT------------------------------------------------------CCT---- 719
|||||||||.||| |||
Sbjct 1259 AAGAAGCCTATATGAAACTGGGACGGAACGTGGCAAGAACATTTCTAGATTATTACCGGCTGAACTCCCTGGTT 1332
Query 720 ----------TAGTCCCCA--CCCAGCCTTGGGCCAGCCCTCATCCA------------------GCCGAGAGT 763
.|||||||| ||.||.|||.| ||||| |..|.|||.
Sbjct 1333 GAGAAGATAGCAGTCCCCATGCCAAGACTTCG----------ATCCAAGGAGGAAAGAAGACTGGGATGGGAGC 1396
Query 764 ATCCA---AGTCTGACAGGTCA-------------------GGAATTAGGCCCCCA---GCTCAGG-------- 804
||||| .||||||..|.|.| |||||| |||| |.||.||
Sbjct 1397 ATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGGGAATT-----CCCATGTGTTCTGGTAAAGCAC 1465
Query 805 -------------------------------------------------------------------------- 804
Sbjct 1466 TCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTGTGGTAGCAGTACCCTACCTCTGGGCCTCATC 1539
Query 805 -------------------------------------------------------------------------- 804
Sbjct 1540 TCCTGTTCCCCTAGTAGCTCAGCCTCCTGGAATGACATGGCAATGTCCAACTCTATACTCCTGCCAGACCATTC 1613
Query 805 ------- 804
Sbjct 1614 TTTTCAC 1620
