Nucleotide Global Alignment

Description

• Query: TRCN0000465668
• Subject: XM_011240654.2
• Aligned Length: 1444
• Identities: 684
• Gaps: 659

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAGCGGAGCCAGACAGCGCCAGAGGCAGGCAATGATACAGGAAATGAGGATGCCATTGGAGGGAATGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAACAAATACATAGTGCTTCCAAATGGATACTCTGGACAGCCCAAGAAAGGACATCTTACCTTTGATGCTTGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGAAAGTGCCTGCAGGAGTATCTTCTCATGCCAGAGACAAGAAGGTAACCTCGGCCGGGTTGAGCAAGTCTCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GATTTTGAGTATGATCTGTTCATTAGGCCGGACACCTGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGAAAATGTGAAAGAATTGCAGAGGGTAATTTTCAACATTGTTAACTTCAGTAAAACCAAGAGTCTTTACCGAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGGGATGGCACCAATGGTGAAATCTACCAGCAGACCAAAATGGCAAAGACTACCACCAAAAAACGTTTATTAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TATCGCTGCCCAGACCACAGGAAGAACTATGTGATGTCCTTTGCATTCTGTTTTGACCGAGAAGATGATATCTA  518

Query    1  -------------------------------------------------------------------------A  1
                                                                                     |
Sbjct  519  CCAGTTTGCTTACTGCTACCCTTATACATATACTCGCTTCCAGCATTACCTCGACAGCTTACAAAAGAAAAACA  592

Query    2  TGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGC  75
            |||||||.|||||.|||||.|||||.||.||||||||||||||.||..||||||||||||||||||||||||||
Sbjct  593  TGGATTATTTCTTCCGGGAACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGACGATAACCAGC  666

Query   76  CCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAACACC  149
            ||.||.||||||||.||||||.||||..||||||||.|||||||||||||.||||||||||||||||||||.||
Sbjct  667  CCGGAGAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCC  740

Query  150  CTCATCATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAAT  223
            .||.|||||||||||||||||.|||||.||||||||||||||.|||||.||.||||||.|||||||.||.|||.
Sbjct  741  ATCTTCATTTGTGTGCCAAGGAATCATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCGTGTCCTACGAGAAC  814

Query  224  ACCTGGTCTTCAAGATCGCACCAATGCTCAATCCTGATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATG  297
            |..|.|||||||||||.||.|||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||
Sbjct  815  ATTTAGTCTTCAAGATTGCTCCAATGCTCAACCCTGATGGAGTTTACCTGGGCAACTACAGGTGTTCCCTGATG  888

Query  298  GGATTTGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACT  371
            ||.|||||.||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||.||
Sbjct  889  GGGTTTGACCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGCCCATCCCACCCTGCATGGAGTGAAACAGCT  962

Query  372  CATCGTCCAGATGTACAACGACCCAAAAACAAGCCTGGAGTTTTATATTGACATCCATGCCCACTCCACCATGA  445
            .||..||.||||||||||.|||||||||||||||||||||||.||||||||||||||.||.|||||||||||||
Sbjct  963  TATTATCAAGATGTACAATGACCCAAAAACAAGCCTGGAGTTCTATATTGACATCCACGCTCACTCCACCATGA  1036

Query  446  TGAATGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTC  519
            ||||||||||||||||.|||||.||||||||||||||||||||||||||.||||||.||||||||||.||.|||
Sbjct 1037  TGAATGGCTTCATGTACGGCAATATCTTTGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTC  1110

Query  520  CTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGCACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGG  593
            ||.|||||||||||.|||||||||||||||.|.|||||||||||.|||.||||.||||||||||||||||||||
Sbjct 1111  CTTTGCCAGAATGCCGAGGACTTCTCCTATACTAGCACATCCTTCAACAGGGATGCTGTGAAAGCAGGAACTGG  1184

Query  594  CCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTCCTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACA  667
            |||.||||||||.||.||.||.|||||||||.|.||.||.|||||.|||||||||||.||||||||||||||||
Sbjct 1185  CCGGCGCTTCCTGGGCGGGCTTCTGGACCACTCATCATACTGCTATACCCTAGAGGTTTCCTTCTACAGCTACA  1258

Query  668  TCATCAGTGGCACCACGGCTGCTGTGCCCTACACTGAAGAAGCCTGTAT---CCTTAGTCCCCACCCAGCCTTG  738
            ||||..|.||.||.||.|||||.||||||||||||||||||||||.|||   .||..|     ||..|.|.|  
Sbjct 1259  TCATTGGGGGTACTACAGCTGCAGTGCCCTACACTGAAGAAGCCTATATGAAACTGGG-----ACGGAACGT--  1325

Query  739  GGCCAGCCCTCATCCAGC----CGAGAGTAT--CCAAGTCTGA-----CAGG-TCAGGAATTAG--GCCCCCA-  797
            |||.||         |.|    |.|||.|||  ||  |.||||     |.|| |.||.|..|||  |.||||| 
Sbjct 1326  GGCAAG---------AACATTTCTAGATTATTACC--GGCTGAACTCCCTGGTTGAGAAGATAGCAGTCCCCAT  1388

Query  798  GCTCAGG-------------------------------  804
            || ||.|                               
Sbjct 1389  GC-CAAGACTTCGATTTAGGTTACAGAGGACACATCTT  1425