Nucleotide Global Alignment

Description

Query:
TRCN0000465668
Subject:
XM_011240655.2
Aligned Length:
1296
Identities:
692
Gaps:
507

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCACCAATGGTGAAATCTACCAGCAGACCAAAATGGCAAAGACTACCACCAAAAAACGTTTATTACTATCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGCCCAGACCACAGGAAGAACTATGTGATGTCCTTTGCATTCTGTTTTGACCGAGAAGATGATATCTACCAGT  148

Query    1  --------------------------------------------------------------------ATGGAT  6
                                                                                ||||||
Sbjct  149  TTGCTTACTGCTACCCTTATACATATACTCGCTTCCAGCATTACCTCGACAGCTTACAAAAGAAAAACATGGAT  222

Query    7  TACTTCTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTCCTGACGATAACCAGCCCTGA  80
            ||.|||||.|||||.|||||.||.||||||||||||||.||..||||||||||||||||||||||||||||.||
Sbjct  223  TATTTCTTCCGGGAACAGCTTGGACAGAGTGTGCAACAGCGGCAGCTTGACCTCCTGACGATAACCAGCCCGGA  296

Query   81  CAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAACACCCTCAT  154
            .||||||||.||||||.||||..||||||||.|||||||||||||.||||||||||||||||||||.||.||.|
Sbjct  297  GAATCTCCGTGAAGGGTCAGAAAAGAAGGTGATATTCATCACAGGGCGAGTCCACCCAGGGGAAACGCCATCTT  370

Query  155  CATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTG  228
            ||||||||||||||||.|||||.||||||||||||||.|||||.||.||||||.|||||||.||.|||.|..|.
Sbjct  371  CATTTGTGTGCCAAGGAATCATCGACTTCCTTGTAAGTCAGCATCCAATTGCCCGTGTCCTACGAGAACATTTA  444

Query  229  GTCTTCAAGATCGCACCAATGCTCAATCCTGATGGAGTCTACCTGGGCAATTACAGGTGTTCTCTGATGGGATT  302
            |||||||||||.||.|||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||||.||
Sbjct  445  GTCTTCAAGATTGCTCCAATGCTCAACCCTGATGGAGTTTACCTGGGCAACTACAGGTGTTCCCTGATGGGGTT  518

Query  303  TGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCG  376
            |||.||||||||||||||||||||||||||||||||||.||||||.||||||||||||||||||||.||.||..
Sbjct  519  TGACCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGCCCATCCCACCCTGCATGGAGTGAAACAGCTTATTA  592

Query  377  TCCAGATGTACAACGACCCAAAAACAAGCCTGGAGTTTTATATTGACATCCATGCCCACTCCACCATGATGAAT  450
            ||.||||||||||.|||||||||||||||||||||||.||||||||||||||.||.||||||||||||||||||
Sbjct  593  TCAAGATGTACAATGACCCAAAAACAAGCCTGGAGTTCTATATTGACATCCACGCTCACTCCACCATGATGAAT  666

Query  451  GGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTG  524
            |||||||||||.|||||.||||||||||||||||||||||||||.||||||.||||||||||.||.|||||.||
Sbjct  667  GGCTTCATGTACGGCAATATCTTTGAGGATGAGGAACGGTTCCAAAGGCAGTCCATTTTTCCAAAACTCCTTTG  740

Query  525  CCAGAATGCTGAGGACTTCTCCTATTCCAGCACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGGCCGTC  598
            |||||||||.|||||||||||||||.|.|||||||||||.|||.||||.|||||||||||||||||||||||.|
Sbjct  741  CCAGAATGCCGAGGACTTCTCCTATACTAGCACATCCTTCAACAGGGATGCTGTGAAAGCAGGAACTGGCCGGC  814

Query  599  GCTTCCTCGGTGGACTCCTGGACCACACTTCCTATTGCTACACCCTAGAGGTCTCCTTCTACAGCTACATCATC  672
            |||||||.||.||.||.|||||||||.|.||.||.|||||.|||||||||||.||||||||||||||||||||.
Sbjct  815  GCTTCCTGGGCGGGCTTCTGGACCACTCATCATACTGCTATACCCTAGAGGTTTCCTTCTACAGCTACATCATT  888

Query  673  AGTGGCACCACGGCTGCTGTGCCCTACACTGAAGAAGCCTGTAT------------------------------  716
            .|.||.||.||.|||||.||||||||||||||||||||||.|||                              
Sbjct  889  GGGGGTACTACAGCTGCAGTGCCCTACACTGAAGAAGCCTATATGAAACTGGGACGGAACGTGGCAAGAACATT  962

Query  717  ------------------------CCT--------------TAGTCCCCA--CCCAGCCTTGGGCCAGCCCTCA  750
                                    |||              .||||||||  ||.||.|||.|          |
Sbjct  963  TCTAGATTATTACCGGCTGAACTCCCTGGTTGAGAAGATAGCAGTCCCCATGCCAAGACTTCG----------A  1026

Query  751  TCCA------------------GCCGAGAGTATCCA---AGTCTGACAGGTCA-------------------GG  784
            ||||                  |..|.|||.|||||   .||||||..|.|.|                   ||
Sbjct 1027  TCCAAGGAGGAAAGAAGACTGGGATGGGAGCATCCATCTTGTCTGAGGGCTGAACAACCACTGGAAGTGCTGGG  1100

Query  785  AATTAGGCCCCCA---GCTCAGG---------------------------------------------------  804
            ||||     ||||   |.||.||                                                   
Sbjct 1101  AATT-----CCCATGTGTTCTGGTAAAGCACTCAATGAGCATCTTGGCAATGACATCCAGTGGCATCTGGATTG  1169

Query  805  --------------------------------------------------------------------------  804
                                                                                      
Sbjct 1170  TGGTAGCAGTACCCTACCTCTGGGCCTCATCTCCTGTTCCCCTAGTAGCTCAGCCTCCTGGAATGACATGGCAA  1243

Query  805  --------------------------------------  804
                                                  
Sbjct 1244  TGTCCAACTCTATACTCCTGCCAGACCATTCTTTTCAC  1281