Nucleotide Global Alignment

Description

• Query: TRCN0000465689
• Subject: XM_017026989.1
• Aligned Length: 1545
• Identities: 1160
• Gaps: 353

Alignment

Query    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74

Query   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148

Query  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222

Query  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296

Query  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370

Query  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444

Query  445  CACATGGATGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CACATGGACGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518

Query  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592

Query  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATAGACTCC  666
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  666

Query  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTCCGGAGCGGTTGCAGGGCACACATTACTCGGTGCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTCCGGAGCGGTTGCAGGGCACACATTACTCGGTGCA  740

Query  741  GTCGGACATCTGGAGCATGGGCCTGTCCCTGGTGGAGCTGGCCCGGAGGAAGGTACCCCATCCCCCCGCCCGAC  814
            ||||||||||||||||||||||||||||||||||||||||| |||..|||||||||||||||||||||||||||
Sbjct  741  GTCGGACATCTGGAGCATGGGCCTGTCCCTGGTGGAGCTGG-CCGTCGGAAGGTACCCCATCCCCCCGCCCGAC  813

Query  815  GCCAAAGAGCTGGAGGCCATCTTTGGCCGGCCCGTGGTCGACGGGGAAGAAGGAGAGCCTCACAGCATCTCGCC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  814  GCCAAAGAGCTGGAGGCCATCTTTGGCCGGCCCGTGGTCGACGGGGAAGAAGGAGAGCCTCACAGCATCTCGCC  887

Query  889  TCGGCCGAGGCCCCCCGGGCGCCCCGTCAGCGGTCACGGGATGGATAGCCGGCCTGCCATGGCCATCTTTGAAC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  888  TCGGCCGAGGCCCCCCGGGCGCCCCGTCAGCGGTCACGGGATGGATAGCCGGCCTGCCATGGCCATCTTTGAAC  961

Query  963  TCCTGGACTATATTGTGAACGAGCCACCTCCTAAGCTGCCCAACGGTGTGTTCACCCCCGACTTCCAGGAGTTT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  962  TCCTGGACTATATTGTGAACGAGCCACCTCCTAAGCTGCCCAACGGTGTGTTCACCCCCGACTTCCAGGAGTTT  1035

Query 1037  GTCAATAAATG---------------------------------CCT--CATCAAGAACCCAGC---------G  1066
            |||||||||||                                 |||  |..||||.|||||||         |
Sbjct 1036  GTCAATAAATGGTTCTGGGAGGGTCGCCAGCCCCACTCCATTCTCCTGCCCCCAAGCACCCAGCAGCACCTGTG  1109

Query 1067  GAGCGGGC------GGACCTGAAGATGCTCACAAACC------------------ACACC------TTCATCAA  1110
            |.|.||||      || |.||    ||| |.||.|||                  |||||      ..|| ||.
Sbjct 1110  GCGTGGGCTTCACAGG-CATG----TGC-CGCAGACCACGGGGAAGGAGCTGCGGACACCCCGCTGCCCA-CAG  1176

Query 1111  G--CGGTCC--------GAG-----------GTGGAA---------------------GAAGT-----------  1131
            |  ||||||        |||           ||||||                     |.|||           
Sbjct 1177  GGCCGGTCCATGTGTGTGAGCTCGGGACGCCGTGGAACGGCACCGCACTCCTGGTGCCGGAGTTGCCCCGGGCC  1250

Query 1132  -----------------GGATTTTGCC---GGC---TGGTTGTGTAAAAC-----CCTGCGG------------  1165
                             .|||.|||||   |||   .||||.|.|.|.||     .|||.||            
Sbjct 1251  CTTGGCGTGCGCTCCGGCGATGTTGCCCCGGGCCTGGGGTTTTATTAGACAGTTAGCTGGGGTTGCGTCCAGGC  1324

Query 1166  --CTGA---ACCAGCCCGG----CACACC------------CACGCGCACCGCCGTG-----------------  1201
              ||||   |||||.|.||    |.||||            |||.|.| ||||.|.|                 
Sbjct 1325  TTCTGACCCACCAGGCGGGGTTTCCCACCCTCTTTCCCTCTCACCCTC-CCGCTGGGGGGTGTCCTGCCCCTGG  1397

Query 1202  --------------------------------------------------------------------------  1201
                                                                                      
Sbjct 1398  CACCAAAGTGCAGAGGTGGATCCCTCGTCCTCTGCCAGGAGGCAGAACAGAGCAGCCACTCTGTGCCACTCTCT  1471

Query 1202  -----------------------------------------------------------------  1201
                                                                             
Sbjct 1472  CTGGTCGGAGAGATCCAGGCCCCCTCCGACCACGGCCCACACGCGGGTGCCCCGGGGCCACCAGC  1536