Nucleotide Global Alignment

Description

• Query: TRCN0000465689
• Subject: XM_017026990.1
• Aligned Length: 1399
• Identities: 989
• Gaps: 340

Alignment

Query    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74

Query   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148

Query  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222

Query  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296

Query  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370

Query  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444

Query  445  CACATGGATGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CACATGGACGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518

Query  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592

Query  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATAGACTCC  666
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  666

Query  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTCCGGAGCGGTTGCAGGGCACACAT--TA--CT---  733
            ||||||||||||||||||||||||||||||||||||||||                  |||.|  ||  ||   
Sbjct  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTC------------------CACCTCCTAAGCTGCC  722

Query  734  ---CGGTGCAGT------CGGACATCTGGAGCATGGGCCTGTCCCT-GGTGGAGCTGGCCCGGAGGAAGGT---  794
               ||||| .||      |.|||.||     ||.|.|..||||..| ..|||..|||       |||.|||   
Sbjct  723  CAACGGTG-TGTTCACCCCCGACTTC-----CAGGAGTTTGTCAATAAATGGTTCTG-------GGAGGGTCGC  783

Query  795  -------ACCCCATCCCCCCGCCCGACGCCAAAG-----AGCTGGAGGCCATCTTTGGC--CGGC---------  845
                   ||.||||.|.||.|||     ||.|||     |||.|     ||.||.||||  .|||         
Sbjct  784  CAGCCCCACTCCATTCTCCTGCC-----CCCAAGCACCCAGCAG-----CACCTGTGGCGTGGGCTTCACAGGC  847

Query  846  -----CCGTGGTCGACGGGGAAGAA-----GGAGA-------GCCTCACAG--------CAT---------CTC  885
                 |||..|.|.|||||||||.|     |||.|       ||| |||||        |||         |||
Sbjct  848  ATGTGCCGCAGACCACGGGGAAGGAGCTGCGGACACCCCGCTGCC-CACAGGGCCGGTCCATGTGTGTGAGCTC  920

Query  886  G-------------------------CCTCG-GCC-GAGGCCCCCCGGGCGCCC----CGTCAGCGGTCACGG-  927
            |                         |||.| ||| |||...||||||  ||||    |||  |||.|| ||| 
Sbjct  921  GGGACGCCGTGGAACGGCACCGCACTCCTGGTGCCGGAGTTGCCCCGG--GCCCTTGGCGT--GCGCTC-CGGC  989

Query  928  GATGGATAGCC---GGCCTGCCATGGCCATCTTTGA----AC-----------------TCCTGGACTATATTG  977
            ||||  |.|||   ||||||    ||    .|||.|    ||                 |||.||     .||.
Sbjct  990  GATG--TTGCCCCGGGCCTG----GG----GTTTTATTAGACAGTTAGCTGGGGTTGCGTCCAGG-----CTTC  1048

Query  978  TGA---ACGAG----------CCA-CCTC-------CTAA-------GCTGCCCAACGGTGTGTTCACCCCCGA  1023
            |||   ||.||          ||| ||||       ||.|       ||||     .||.||||.|..||||  
Sbjct 1049  TGACCCACCAGGCGGGGTTTCCCACCCTCTTTCCCTCTCACCCTCCCGCTG-----GGGGGTGTCCTGCCCC--  1115

Query 1024  CTTCCAGGAGTTTGTCAATAA-------------ATGCCTCATCAAGAACCCAGC--GGAGCGGGCGGACCTGA  1082
                        ||.||..||             ||.||||.||     |.|.||  |||   |||.||.|.||
Sbjct 1116  ------------TGGCACCAAAGTGCAGAGGTGGATCCCTCGTC-----CTCTGCCAGGA---GGCAGAACAGA  1169

Query 1083  AGATGCTCACAAACCA--------CACCTTCATCAAGCGGTCCGAGGTGGAAGAAGTGGATTTTGCCGGCTGGT  1148
                ||     |.|||        |||..|| ||   .||||.|||     |||         |.|.|||    
Sbjct 1170  ----GC-----AGCCACTCTGTGCCACTCTC-TC---TGGTCGGAG-----AGA---------TCCAGGC----  1212

Query 1149  TGTGTAAAACCCTGCGGCTGAACCAGCCCGGCACACCCACGCG-------------CACC-GCCGTG  1201
                    .||||.||     ||||   ||||.||  ||||||             |||| ||    
Sbjct 1213  --------CCCCTCCG-----ACCA---CGGCCCA--CACGCGGGTGCCCCGGGGCCACCAGC----  1257