Nucleotide Global Alignment

Description

Query:
TRCN0000465759
Subject:
XM_011248399.2
Aligned Length:
2887
Identities:
2408
Gaps:
110

Alignment

Query    1  ------------------------------------ATGGAGGAGTCTGGCATGGCT-CATGAATCAGCAGAGG  37
                                                |.|||||||.||||| .|||| |||||.||||||||||
Sbjct    1  ATGGAGCCCGTCCCTGAGAAGGGCGTCAAAACCACTAAGGAGGAGCCTGGC-GGGCTCCATGAGTCAGCAGAGG  73

Query   38  ACTTGTTTCATTTCAACGTAGGGGGCTGGCATTTCTCAGTTCCCAGAAGCAAACTCTCTCAGTTTCCAGACTCC  111
            |.||||||||.|||||.||.||||||||||||||||||||||||||.||||||||..|||||||.||||||||.
Sbjct   74  ATTTGTTTCACTTCAATGTCGGGGGCTGGCATTTCTCAGTTCCCAGGAGCAAACTTGCTCAGTTCCCAGACTCG  147

Query  112  CTGCTGTGGAAAGAGGCTTCAGCCTTGACCTCTTCAGAAAGCCAGAGGCTATTTATCGACAGAGATGGTTCCAC  185
            |||.||||||||||||||||||||.|||||||||||||.|.||||.||||.||.||.||||||||.||.|||||
Sbjct  148  CTGTTGTGGAAAGAGGCTTCAGCCCTGACCTCTTCAGAGAACCAGCGGCTCTTCATTGACAGAGACGGCTCCAC  221

Query  186  ATTTAGGCACGTGCACTATTACCTCTACACCTCCAAACTCTCCTTCTCCAGTTGTGCAGAACTGAACTTGCTGT  259
            .||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct  222  GTTTAGGCATGTGCACTATTACCTCTACACGTCCAAGCTCTCCTTCTCCAGTTGTGCAGAACTGAACTTGCTCT  295

Query  260  ATGAGCAAGCATTGGGTTTGCAGCTGATGCCTTTGCTGCAGACTCTAGATAACCTGAAGGAAGGGAAACACCAT  333
            ||||||||||..|||||||||||||||||||.|||||.|||||.||||||||||||||||||||||.||||||.
Sbjct  296  ATGAGCAAGCCCTGGGTTTGCAGCTGATGCCCTTGCTTCAGACCCTAGATAACCTGAAGGAAGGGAGACACCAC  369

Query  334  CTACGCGTACGGCCTGCAGACCTACCTGTTGCTGAGAGAGCATCTCTGAACTACTGGCGTACATGGAAGTGTAT  407
            ||.||.||.||||||||.|||.|.|||||.||||||||||||||.||||||||||||||.||||||||||||||
Sbjct  370  CTCCGTGTGCGGCCTGCCGACATTCCTGTGGCTGAGAGAGCATCCCTGAACTACTGGCGGACATGGAAGTGTAT  443

Query  408  TAGCAAACCCTCAGAATTTCCAATTAAAAGCCCAGCCTTTACAGGCCTACATGATAAGGCACCTCTGGGGCTCA  481
            .|||||.|||||.||.||||||||.||||||||.|||||.|||||.||.|||||.|||||.|||.||||.||||
Sbjct  444  CAGCAAGCCCTCGGATTTTCCAATAAAAAGCCCCGCCTTCACAGGTCTTCATGACAAGGCCCCTTTGGGACTCA  517

Query  482  TGGACACACCCCTGTTAGACACAGAAGAGGAGGTGCACTACTGCTTCCTGCCCCTAGACCTGGTGGCCAAATAT  555
            ||||||||||.|||||.||||||||||||||.|||||||||||||||.|.|||||.|||.||||||||||.||.
Sbjct  518  TGGACACACCGCTGTTGGACACAGAAGAGGAAGTGCACTACTGCTTCTTACCCCTCGACTTGGTGGCCAAGTAC  591

Query  556  CCCAGCCTAGTGACTGAAGACAACCTGCTGTGGCTGGCTGAGACGGTGGCCCTCATCGAGTGCGAGTGCAGCGA  629
            ||.|||||||||||.||||||||.|||||||||||||||||.|||||||||||.|||||||||||.||||||||
Sbjct  592  CCAAGCCTAGTGACCGAAGACAATCTGCTGTGGCTGGCTGAAACGGTGGCCCTGATCGAGTGCGAATGCAGCGA  665

Query  630  GTTCCGCTTCATTGTGAATTTTCTTCGCTCACAGAAGATTTTACTACCGGATAATTTCTCCAACATTGATGTAT  703
            ||||||||||||||||||||||||.||||||||.||||||||||||||.|||||.|||||||||||.|||||.|
Sbjct  666  GTTCCGCTTCATTGTGAATTTTCTACGCTCACACAAGATTTTACTACCAGATAACTTCTCCAACATAGATGTGT  739

Query  704  TAGAAGCAGAAGTGGAAATTCTGGAAATCCCTGCACTCACTGAAGCCGTAAGGTGGTACCGGATGAA-------  770
            |||||||||||||.|||||||||||||||||||..||.||.|||||.|||.|||.||||||||||||       
Sbjct  740  TAGAAGCAGAAGTAGAAATTCTGGAAATCCCTGAGCTTACAGAAGCTGTACGGTTGTACCGGATGAATATGGCG  813

Query  771  --------------------------------------------------------------CATGGGTGGCTG  782
                                                                          |.||||||||||
Sbjct  814  TTGCAACCAGCGTTGCCAGGGCCGAAGGGAAGCCAGCTTAGCCTGGAGCAGGAGGAGCCTAGCCTGGGTGGCTG  887

Query  783  TTCCCCGACCACCTGTTCTCCCCTGAGCCCCGGGAAGGGGGCCCGCACAGCCAGCCTGGAGTCCGTGAAACCGC  856
            |||||.||||.||||..|.||.||.||.||.||.|||||||..||.||||||||..|||||||.||||||||.|
Sbjct  888  TTCCCGGACCTCCTGCCCACCTCTAAGTCCTGGAAAGGGGGGTCGTACAGCCAGTGTGGAGTCTGTGAAACCAC  961

Query  857  TCTACACAATGGCCCTGGGTCTGCTGGTCAAGTACCCGGACTCTGCGCTGGGCCAGCTTCGCATCGAGAGCACG  930
            |.|||...|||||||||||.||||||||||||||.||.||||||||.|||||.|||||.|||||||||||||||
Sbjct  962  TGTACTTGATGGCCCTGGGCCTGCTGGTCAAGTATCCAGACTCTGCACTGGGACAGCTGCGCATCGAGAGCACG  1035

Query  931  CTAGACGGAAGCCGACTGTACATCACAGGGAATGGCGTCCTCTTTCAGCACGTCAAGAACTGGCTGGGGACTTG  1004
            ||.|||||||||.||||.||||||||||||||.||.|.|||.||.||||||||||.||||||||||||.|||||
Sbjct 1036  CTGGACGGAAGCAGACTATACATCACAGGGAACGGGGCCCTTTTCCAGCACGTCAGGAACTGGCTGGGCACTTG  1109

Query 1005  CCGGCTGCCCCTGACAGAGACCATTTCCGAGGTATATGAGCTCTGTGCCTTCCTAGACAAAAGGGACATCACCT  1078
            .||||||||||||||.||||||||.||||||||.|||||||||||.||||||||.|||||.|||||||||||||
Sbjct 1110  TCGGCTGCCCCTGACTGAGACCATCTCCGAGGTGTATGAGCTCTGCGCCTTCCTGGACAAGAGGGACATCACCT  1183

Query 1079  ACGAGCCAATCAAAGTTGCTTTGAAGACTCATCTGGAGCCAAGGACTTTGGCACCCATGGATGTGCTCA---AT  1149
            ||||||||||.|||||.|||.|||||||||||||||||||||||||||||...|||.||||||||||||   |.
Sbjct 1184  ACGAGCCAATGAAAGTGGCTCTGAAGACTCATCTGGAGCCAAGGACTTTGCTGCCCGTGGATGTGCTCAGTGAG  1257

Query 1150  GAGTGGACGGCAGAGATCACTGTGTATTCCCCACAACAGATCATCAAAGTGTATGTTGGAAGCCACTGGTACGC  1223
            ||||||||.||.|||.||||..|.||.||.|||||.|||||||||||..|.||||||||||||||.|||||.||
Sbjct 1258  GAGTGGACAGCTGAGGTCACGATATACTCACCACAGCAGATCATCAAGCTTTATGTTGGAAGCCATTGGTATGC  1331

Query 1224  AACCACCCTGCAGACACTGCTGAAGTATCCAGAACTGCTGTCCAACCCTCAGAGAGTGTACTGGATCACATATG  1297
            |||.|||||||||||.|||.|||||||.|||||||||||.||||||.||||||||||||||||||||.|.||.|
Sbjct 1332  AACGACCCTGCAGACCCTGATGAAGTACCCAGAACTGCTATCCAACACTCAGAGAGTGTACTGGATCGCCTACG  1405

Query 1298  GACAAACCCTGCTCATCCACGGGGATGGCCAGATGTTCCGACACATTCTCAACTTCCTGAGACTTGGCAAACTG  1371
            ||||.|||.|||||||.||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||
Sbjct 1406  GACAGACCTTGCTCATTCACGGGGACGGCCAAATGTTCCGACACATTCTCAACTTCCTGAGACTTGGAAAACTG  1479

Query 1372  TTTTTACCATCTGAATTTAAGGAATGGCCCCTCTTCTGCCAGGAGGTGGAGGAATACCACATTCCATCCCTCTC  1445
            |||||||||||.|||||||||||||||||.|||||||||||||||||||||||.||.||.||||||.|||||||
Sbjct 1480  TTTTTACCATCAGAATTTAAGGAATGGCCTCTCTTCTGCCAGGAGGTGGAGGAGTATCATATTCCAGCCCTCTC  1553

Query 1446  AGAAGCCCTTGCACAATGTGAAGCATACAAGTCATGGACTCAGGAGAAAGAATCTGAAAATGAAGAAGCTTTTT  1519
            |||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1554  AGAAGCCCTGGCACAATGCGAAGCATACAAGTCATGGACTCAGGAGAAAGAATCTGAAAATGAAGAAGCTTTTC  1627

Query 1520  CCATCAGGAGGCTGCATGTGGTGACAGAAGGGCCAGGGTCACTGGTGGAGTTCAGTAGAGACACTAAAGAAACC  1593
            ||||.||||.|||||||||||||||.||||||.|||||.||.|||..||||||||.|||||..|.||.||||||
Sbjct 1628  CCATTAGGAAGCTGCATGTGGTGACCGAAGGGACAGGGCCAATGGCAGAGTTCAGCAGAGATGCCAAGGAAACC  1701

Query 1594  ACAGCCTACATGCCTGTGGACTTCGAAGACTGCAGTGACAGGACTCCATGGAACAAGGCTAAGGGAAACCTGGT  1667
            |||||||.||||||||||||||||.|.||.|||||||||||||||||||||||||||||.||.||.||||||..
Sbjct 1702  ACAGCCTGCATGCCTGTGGACTTCCAGGAATGCAGTGACAGGACTCCATGGAACAAGGCCAAAGGGAACCTGAC  1775

Query 1668  CAGGTCCAACCAGATGGATGAGGCTGAGCAGTACACTCGGCCCATCCAGGTGTCCCTATGCCGAAATGCCAAGA  1741
            ||||||||.|||||||||.||||||||||||||.||.|||.|.||.|||||.|||||.|||.||||||||||||
Sbjct 1776  CAGGTCCAGCCAGATGGAAGAGGCTGAGCAGTATACCCGGACTATTCAGGTCTCCCTCTGCAGAAATGCCAAGA  1849

Query 1742  GGGCTGGCAACCCTAGCACATACTCACACTGCCGTGGCTTGTGTACCAATCCTGGACACTGGGGGAGCCACCCT  1815
            |||..|||||.||.||||||||||||||||||..|||.||.|||.||||.||..||||.|||||..|.|||.||
Sbjct 1850  GGGGAGGCAATCCCAGCACATACTCACACTGCTCTGGTTTATGTGCCAACCCCAGACATTGGGGAGGTCACTCT  1923

Query 1816  GAGAGCCCCCCAAAGAAGAAATGCACCACAATCAACCTCACACAGAAATCTGAAACCAAAGACCCTCCCGCCAC  1889
            |||||.|||||.||||||||.||||||||.||.|||||||||||||||.||||..|||||||||||||.|.|||
Sbjct 1924  GAGAGTCCCCCCAAGAAGAAGTGCACCACTATAAACCTCACACAGAAACCTGATGCCAAAGACCCTCCTGTCAC  1997

Query 1890  TCCCATGCAAAAACTCATCTCCCTGGTGAGAGAATGGGACATGGTCAATTGCAAACAGTGGGAATTCCAGCCAC  1963
            .|||||||||||||||||.||..|.||.||.|||||||||||||||||.||.||||||||||||||||||||||
Sbjct 1998  CCCCATGCAAAAACTCATATCTTTAGTCAGGGAATGGGACATGGTCAACTGTAAACAGTGGGAATTCCAGCCAC  2071

Query 1964  TGACAGCCACACGGAGCAGCCCCTTGGAGGAGGCCACCCTGCAGCTCCCCTTGGGAAGCGAGGCTGCTTCCCAG  2037
            ||.|||||.|..||||||||.|..||||||||||.|.||||||..||||||.||||||.|||||||||.|.|||
Sbjct 2072  TGCCAGCCTCCAGGAGCAGCTCTGTGGAGGAGGCTAGCCTGCATGTCCCCTCGGGAAGTGAGGCTGCTCCGCAG  2145

Query 2038  CCCAGCACCTCAGCTGCCTGGAAAGCCCATTCCACAGCCTCAGAGAAGGATCCAGGACCACAGGCAGGGGCTGG  2111
            ||..|.|||||||||||.||||||||.|||||||.|.||||.|||||||||.|.||.||.|||.|.||..|.||
Sbjct 2146  CCTGGTACCTCAGCTGCTTGGAAAGCTCATTCCATAACCTCTGAGAAGGATGCTGGTCCCCAGACTGGACCCGG  2219

Query 2112  AGCTGGAGCGAAAGACAAGGGGCCAGAGCCAACCTTCAAGCCATACTTACCCCCAAAAAGAGCTGGCACCCTGA  2185
            ||||||||.||||||||||||.||||||||||||||.|||||||||||.||..|||||||||||...|||||.|
Sbjct 2220  AGCTGGAGTGAAAGACAAGGGTCCAGAGCCAACCTTTAAGCCATACTTCCCTACAAAAAGAGCTATTACCCTAA  2293

Query 2186  AGGACTGGAGCAAGCAGAGGACCAAGGAGAGAGAAAGCCCTGCCCCTGAGCAGCCTCTGCCCGAGGCCAGTGAG  2259
            ||||||||.|||||||||||.|||||||.||||||||||||||.|||||||||||||||||..|.||.|..|.|
Sbjct 2294  AGGACTGGGGCAAGCAGAGGCCCAAGGACAGAGAAAGCCCTGCTCCTGAGCAGCCTCTGCCTAATGCTAACGGG  2367

Query 2260  GTGGACAGCCTAGGGGTTATCCTCAAAGTGACTCACCCCCCCGTGGTGGGCAGCGATGGCTTCTGCATGTTCTT  2333
            ...||||..|.|||||..||||||||||||.||||||||||.||||||||.|..|||||||.||||||||||||
Sbjct 2368  ACCGACAATCCAGGGGCCATCCTCAAAGTGGCTCACCCCCCTGTGGTGGGTAATGATGGCTCCTGCATGTTCTT  2441

Query 2334  TGAGGACAGCATCATCTATACCACGGAGATGGACAACCTCAGGCACACAACACCCACAGCCAGTCCCCAGCCCC  2407
            |||.||||||||.|||||.|||||..|.|||||.|||.|||.|||.|||.|||.|||||||||.|||||.|..|
Sbjct 2442  TGAAGACAGCATTATCTACACCACCCAAATGGATAACATCAAGCATACATCACTCACAGCCAGCCCCCAACTTC  2515

Query 2408  AAGAAGTGACTTTCCTGAGTTTCTCTCTGTCCTGGGAAGAGATGTTTTATGCACAGAAATGTCACTGCTTCCTG  2481
            .||||||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||.||||||||
Sbjct 2516  GAGAAGTGACTTTTCTGAGCTTCTCTCTGTCCTGGGAGGAGATGTTTTATGCACAGAAATGTCACCGCTTCCTG  2589

Query 2482  GCTGACATCATCATGGATTCCATCAGGCAAAAGGACCCCAAAGCCATCACAGCCAAGGTGGTCTCCCTGGCCAA  2555
            .|.|||||||||.||||||||||||||||||||||.||||||||.|||||||||||||||||.||.||||||.|
Sbjct 2590  ACCGACATCATCTTGGATTCCATCAGGCAAAAGGATCCCAAAGCTATCACAGCCAAGGTGGTGTCTCTGGCCTA  2663

Query 2556  TCGGCTGTGGACCCTGCACATCAGCCCCAAGCAGTTTGTGGTAGATTTGCTGGCCATCACCGGCTTCAAGGATG  2629
            .||.||||||||.|||.|||||||||||||||||||.|||||.|||.|||||||||||.|.|||||||||||||
Sbjct 2664  CCGACTGTGGACACTGAACATCAGCCCCAAGCAGTTCGTGGTGGATCTGCTGGCCATCGCTGGCTTCAAGGATG  2737

Query 2630  ACCGGCACACCCAGGAGCGCCTGTACAGCTGGGTGGAGCTTACACTGCCCTTCGCCAGGAAATATGGCCGATGC  2703
            ||||||||||.||||||||.||||||||.|||||.|||||.||||||||.||||||||.|||||||||||.|||
Sbjct 2738  ACCGGCACACTCAGGAGCGTCTGTACAGTTGGGTAGAGCTCACACTGCCTTTCGCCAGAAAATATGGCCGTTGC  2811

Query 2704  ATGGACCTGCTCATCCAGAGGGGCCTGTCTAGGTCTGTCTCTTACTCCATCCTGGGAAAGTACCTACAAGAGGA  2777
            .||||||||||||||||||||||.|||||.||||||||||||||.||..|||||||.|||||..||||.||||.
Sbjct 2812  GTGGACCTGCTCATCCAGAGGGGACTGTCCAGGTCTGTCTCTTATTCAGTCCTGGGCAAGTATTTACACGAGGG  2885

Query 2778  C  2778
            |
Sbjct 2886  C  2886

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