Nucleotide Global Alignment

Description

Query:
TRCN0000465759
Subject:
XM_011248400.2
Aligned Length:
2818
Identities:
2408
Gaps:
41

Alignment

Query    1  ------------------------------------ATGGAGGAGTCTGGCATGGCT-CATGAATCAGCAGAGG  37
                                                |.|||||||.||||| .|||| |||||.||||||||||
Sbjct    1  ATGGAGCCCGTCCCTGAGAAGGGCGTCAAAACCACTAAGGAGGAGCCTGGC-GGGCTCCATGAGTCAGCAGAGG  73

Query   38  ACTTGTTTCATTTCAACGTAGGGGGCTGGCATTTCTCAGTTCCCAGAAGCAAACTCTCTCAGTTTCCAGACTCC  111
            |.||||||||.|||||.||.||||||||||||||||||||||||||.||||||||..|||||||.||||||||.
Sbjct   74  ATTTGTTTCACTTCAATGTCGGGGGCTGGCATTTCTCAGTTCCCAGGAGCAAACTTGCTCAGTTCCCAGACTCG  147

Query  112  CTGCTGTGGAAAGAGGCTTCAGCCTTGACCTCTTCAGAAAGCCAGAGGCTATTTATCGACAGAGATGGTTCCAC  185
            |||.||||||||||||||||||||.|||||||||||||.|.||||.||||.||.||.||||||||.||.|||||
Sbjct  148  CTGTTGTGGAAAGAGGCTTCAGCCCTGACCTCTTCAGAGAACCAGCGGCTCTTCATTGACAGAGACGGCTCCAC  221

Query  186  ATTTAGGCACGTGCACTATTACCTCTACACCTCCAAACTCTCCTTCTCCAGTTGTGCAGAACTGAACTTGCTGT  259
            .||||||||.||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct  222  GTTTAGGCATGTGCACTATTACCTCTACACGTCCAAGCTCTCCTTCTCCAGTTGTGCAGAACTGAACTTGCTCT  295

Query  260  ATGAGCAAGCATTGGGTTTGCAGCTGATGCCTTTGCTGCAGACTCTAGATAACCTGAAGGAAGGGAAACACCAT  333
            ||||||||||..|||||||||||||||||||.|||||.|||||.||||||||||||||||||||||.||||||.
Sbjct  296  ATGAGCAAGCCCTGGGTTTGCAGCTGATGCCCTTGCTTCAGACCCTAGATAACCTGAAGGAAGGGAGACACCAC  369

Query  334  CTACGCGTACGGCCTGCAGACCTACCTGTTGCTGAGAGAGCATCTCTGAACTACTGGCGTACATGGAAGTGTAT  407
            ||.||.||.||||||||.|||.|.|||||.||||||||||||||.||||||||||||||.||||||||||||||
Sbjct  370  CTCCGTGTGCGGCCTGCCGACATTCCTGTGGCTGAGAGAGCATCCCTGAACTACTGGCGGACATGGAAGTGTAT  443

Query  408  TAGCAAACCCTCAGAATTTCCAATTAAAAGCCCAGCCTTTACAGGCCTACATGATAAGGCACCTCTGGGGCTCA  481
            .|||||.|||||.||.||||||||.||||||||.|||||.|||||.||.|||||.|||||.|||.||||.||||
Sbjct  444  CAGCAAGCCCTCGGATTTTCCAATAAAAAGCCCCGCCTTCACAGGTCTTCATGACAAGGCCCCTTTGGGACTCA  517

Query  482  TGGACACACCCCTGTTAGACACAGAAGAGGAGGTGCACTACTGCTTCCTGCCCCTAGACCTGGTGGCCAAATAT  555
            ||||||||||.|||||.||||||||||||||.|||||||||||||||.|.|||||.|||.||||||||||.||.
Sbjct  518  TGGACACACCGCTGTTGGACACAGAAGAGGAAGTGCACTACTGCTTCTTACCCCTCGACTTGGTGGCCAAGTAC  591

Query  556  CCCAGCCTAGTGACTGAAGACAACCTGCTGTGGCTGGCTGAGACGGTGGCCCTCATCGAGTGCGAGTGCAGCGA  629
            ||.|||||||||||.||||||||.|||||||||||||||||.|||||||||||.|||||||||||.||||||||
Sbjct  592  CCAAGCCTAGTGACCGAAGACAATCTGCTGTGGCTGGCTGAAACGGTGGCCCTGATCGAGTGCGAATGCAGCGA  665

Query  630  GTTCCGCTTCATTGTGAATTTTCTTCGCTCACAGAAGATTTTACTACCGGATAATTTCTCCAACATTGATGTAT  703
            ||||||||||||||||||||||||.||||||||.||||||||||||||.|||||.|||||||||||.|||||.|
Sbjct  666  GTTCCGCTTCATTGTGAATTTTCTACGCTCACACAAGATTTTACTACCAGATAACTTCTCCAACATAGATGTGT  739

Query  704  TAGAAGCAGAAGTGGAAATTCTGGAAATCCCTGCACTCACTGAAGCCGTAAGGTGGTACCGGATGAACATGGGT  777
            |||||||||||||.|||||||||||||||||||..||.||.|||||.|||.|||.||||||||||||.||||||
Sbjct  740  TAGAAGCAGAAGTAGAAATTCTGGAAATCCCTGAGCTTACAGAAGCTGTACGGTTGTACCGGATGAATATGGGT  813

Query  778  GGCTGTTCCCCGACCACCTGTTCTCCCCTGAGCCCCGGGAAGGGGGCCCGCACAGCCAGCCTGGAGTCCGTGAA  851
            ||||||||||.||||.||||..|.||.||.||.||.||.|||||||..||.||||||||..|||||||.|||||
Sbjct  814  GGCTGTTCCCGGACCTCCTGCCCACCTCTAAGTCCTGGAAAGGGGGGTCGTACAGCCAGTGTGGAGTCTGTGAA  887

Query  852  ACCGCTCTACACAATGGCCCTGGGTCTGCTGGTCAAGTACCCGGACTCTGCGCTGGGCCAGCTTCGCATCGAGA  925
            |||.||.|||...|||||||||||.||||||||||||||.||.||||||||.|||||.|||||.||||||||||
Sbjct  888  ACCACTGTACTTGATGGCCCTGGGCCTGCTGGTCAAGTATCCAGACTCTGCACTGGGACAGCTGCGCATCGAGA  961

Query  926  GCACGCTAGACGGAAGCCGACTGTACATCACAGGGAATGGCGTCCTCTTTCAGCACGTCAAGAACTGGCTGGGG  999
            |||||||.|||||||||.||||.||||||||||||||.||.|.|||.||.||||||||||.||||||||||||.
Sbjct  962  GCACGCTGGACGGAAGCAGACTATACATCACAGGGAACGGGGCCCTTTTCCAGCACGTCAGGAACTGGCTGGGC  1035

Query 1000  ACTTGCCGGCTGCCCCTGACAGAGACCATTTCCGAGGTATATGAGCTCTGTGCCTTCCTAGACAAAAGGGACAT  1073
            |||||.||||||||||||||.||||||||.||||||||.|||||||||||.||||||||.|||||.||||||||
Sbjct 1036  ACTTGTCGGCTGCCCCTGACTGAGACCATCTCCGAGGTGTATGAGCTCTGCGCCTTCCTGGACAAGAGGGACAT  1109

Query 1074  CACCTACGAGCCAATCAAAGTTGCTTTGAAGACTCATCTGGAGCCAAGGACTTTGGCACCCATGGATGTGCTCA  1147
            |||||||||||||||.|||||.|||.|||||||||||||||||||||||||||||...|||.||||||||||||
Sbjct 1110  CACCTACGAGCCAATGAAAGTGGCTCTGAAGACTCATCTGGAGCCAAGGACTTTGCTGCCCGTGGATGTGCTCA  1183

Query 1148  ---ATGAGTGGACGGCAGAGATCACTGTGTATTCCCCACAACAGATCATCAAAGTGTATGTTGGAAGCCACTGG  1218
               |.||||||||.||.|||.||||..|.||.||.|||||.|||||||||||..|.||||||||||||||.|||
Sbjct 1184  GTGAGGAGTGGACAGCTGAGGTCACGATATACTCACCACAGCAGATCATCAAGCTTTATGTTGGAAGCCATTGG  1257

Query 1219  TACGCAACCACCCTGCAGACACTGCTGAAGTATCCAGAACTGCTGTCCAACCCTCAGAGAGTGTACTGGATCAC  1292
            ||.|||||.|||||||||||.|||.|||||||.|||||||||||.||||||.||||||||||||||||||||.|
Sbjct 1258  TATGCAACGACCCTGCAGACCCTGATGAAGTACCCAGAACTGCTATCCAACACTCAGAGAGTGTACTGGATCGC  1331

Query 1293  ATATGGACAAACCCTGCTCATCCACGGGGATGGCCAGATGTTCCGACACATTCTCAACTTCCTGAGACTTGGCA  1366
            .||.|||||.|||.|||||||.||||||||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct 1332  CTACGGACAGACCTTGCTCATTCACGGGGACGGCCAAATGTTCCGACACATTCTCAACTTCCTGAGACTTGGAA  1405

Query 1367  AACTGTTTTTACCATCTGAATTTAAGGAATGGCCCCTCTTCTGCCAGGAGGTGGAGGAATACCACATTCCATCC  1440
            ||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||.||.||.||||||.||
Sbjct 1406  AACTGTTTTTACCATCAGAATTTAAGGAATGGCCTCTCTTCTGCCAGGAGGTGGAGGAGTATCATATTCCAGCC  1479

Query 1441  CTCTCAGAAGCCCTTGCACAATGTGAAGCATACAAGTCATGGACTCAGGAGAAAGAATCTGAAAATGAAGAAGC  1514
            ||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480  CTCTCAGAAGCCCTGGCACAATGCGAAGCATACAAGTCATGGACTCAGGAGAAAGAATCTGAAAATGAAGAAGC  1553

Query 1515  TTTTTCCATCAGGAGGCTGCATGTGGTGACAGAAGGGCCAGGGTCACTGGTGGAGTTCAGTAGAGACACTAAAG  1588
            ||||.||||.||||.|||||||||||||||.||||||.|||||.||.|||..||||||||.|||||..|.||.|
Sbjct 1554  TTTTCCCATTAGGAAGCTGCATGTGGTGACCGAAGGGACAGGGCCAATGGCAGAGTTCAGCAGAGATGCCAAGG  1627

Query 1589  AAACCACAGCCTACATGCCTGTGGACTTCGAAGACTGCAGTGACAGGACTCCATGGAACAAGGCTAAGGGAAAC  1662
            ||||||||||||.||||||||||||||||.|.||.|||||||||||||||||||||||||||||.||.||.|||
Sbjct 1628  AAACCACAGCCTGCATGCCTGTGGACTTCCAGGAATGCAGTGACAGGACTCCATGGAACAAGGCCAAAGGGAAC  1701

Query 1663  CTGGTCAGGTCCAACCAGATGGATGAGGCTGAGCAGTACACTCGGCCCATCCAGGTGTCCCTATGCCGAAATGC  1736
            |||..||||||||.|||||||||.||||||||||||||.||.|||.|.||.|||||.|||||.|||.|||||||
Sbjct 1702  CTGACCAGGTCCAGCCAGATGGAAGAGGCTGAGCAGTATACCCGGACTATTCAGGTCTCCCTCTGCAGAAATGC  1775

Query 1737  CAAGAGGGCTGGCAACCCTAGCACATACTCACACTGCCGTGGCTTGTGTACCAATCCTGGACACTGGGGGAGCC  1810
            ||||||||..|||||.||.||||||||||||||||||..|||.||.|||.||||.||..||||.|||||..|.|
Sbjct 1776  CAAGAGGGGAGGCAATCCCAGCACATACTCACACTGCTCTGGTTTATGTGCCAACCCCAGACATTGGGGAGGTC  1849

Query 1811  ACCCTGAGAGCCCCCCAAAGAAGAAATGCACCACAATCAACCTCACACAGAAATCTGAAACCAAAGACCCTCCC  1884
            ||.|||||||.|||||.||||||||.||||||||.||.|||||||||||||||.||||..|||||||||||||.
Sbjct 1850  ACTCTGAGAGTCCCCCCAAGAAGAAGTGCACCACTATAAACCTCACACAGAAACCTGATGCCAAAGACCCTCCT  1923

Query 1885  GCCACTCCCATGCAAAAACTCATCTCCCTGGTGAGAGAATGGGACATGGTCAATTGCAAACAGTGGGAATTCCA  1958
            |.|||.|||||||||||||||||.||..|.||.||.|||||||||||||||||.||.|||||||||||||||||
Sbjct 1924  GTCACCCCCATGCAAAAACTCATATCTTTAGTCAGGGAATGGGACATGGTCAACTGTAAACAGTGGGAATTCCA  1997

Query 1959  GCCACTGACAGCCACACGGAGCAGCCCCTTGGAGGAGGCCACCCTGCAGCTCCCCTTGGGAAGCGAGGCTGCTT  2032
            |||||||.|||||.|..||||||||.|..||||||||||.|.||||||..||||||.||||||.|||||||||.
Sbjct 1998  GCCACTGCCAGCCTCCAGGAGCAGCTCTGTGGAGGAGGCTAGCCTGCATGTCCCCTCGGGAAGTGAGGCTGCTC  2071

Query 2033  CCCAGCCCAGCACCTCAGCTGCCTGGAAAGCCCATTCCACAGCCTCAGAGAAGGATCCAGGACCACAGGCAGGG  2106
            |.|||||..|.|||||||||||.||||||||.|||||||.|.||||.|||||||||.|.||.||.|||.|.||.
Sbjct 2072  CGCAGCCTGGTACCTCAGCTGCTTGGAAAGCTCATTCCATAACCTCTGAGAAGGATGCTGGTCCCCAGACTGGA  2145

Query 2107  GCTGGAGCTGGAGCGAAAGACAAGGGGCCAGAGCCAACCTTCAAGCCATACTTACCCCCAAAAAGAGCTGGCAC  2180
            .|.||||||||||.||||||||||||.||||||||||||||.|||||||||||.||..|||||||||||...||
Sbjct 2146  CCCGGAGCTGGAGTGAAAGACAAGGGTCCAGAGCCAACCTTTAAGCCATACTTCCCTACAAAAAGAGCTATTAC  2219

Query 2181  CCTGAAGGACTGGAGCAAGCAGAGGACCAAGGAGAGAGAAAGCCCTGCCCCTGAGCAGCCTCTGCCCGAGGCCA  2254
            |||.|||||||||.|||||||||||.|||||||.||||||||||||||.|||||||||||||||||..|.||.|
Sbjct 2220  CCTAAAGGACTGGGGCAAGCAGAGGCCCAAGGACAGAGAAAGCCCTGCTCCTGAGCAGCCTCTGCCTAATGCTA  2293

Query 2255  GTGAGGTGGACAGCCTAGGGGTTATCCTCAAAGTGACTCACCCCCCCGTGGTGGGCAGCGATGGCTTCTGCATG  2328
            ..|.|...||||..|.|||||..||||||||||||.||||||||||.||||||||.|..|||||||.|||||||
Sbjct 2294  ACGGGACCGACAATCCAGGGGCCATCCTCAAAGTGGCTCACCCCCCTGTGGTGGGTAATGATGGCTCCTGCATG  2367

Query 2329  TTCTTTGAGGACAGCATCATCTATACCACGGAGATGGACAACCTCAGGCACACAACACCCACAGCCAGTCCCCA  2402
            ||||||||.||||||||.|||||.|||||..|.|||||.|||.|||.|||.|||.|||.|||||||||.|||||
Sbjct 2368  TTCTTTGAAGACAGCATTATCTACACCACCCAAATGGATAACATCAAGCATACATCACTCACAGCCAGCCCCCA  2441

Query 2403  GCCCCAAGAAGTGACTTTCCTGAGTTTCTCTCTGTCCTGGGAAGAGATGTTTTATGCACAGAAATGTCACTGCT  2476
            .|..|.||||||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||.|||
Sbjct 2442  ACTTCGAGAAGTGACTTTTCTGAGCTTCTCTCTGTCCTGGGAGGAGATGTTTTATGCACAGAAATGTCACCGCT  2515

Query 2477  TCCTGGCTGACATCATCATGGATTCCATCAGGCAAAAGGACCCCAAAGCCATCACAGCCAAGGTGGTCTCCCTG  2550
            |||||.|.|||||||||.||||||||||||||||||||||.||||||||.|||||||||||||||||.||.|||
Sbjct 2516  TCCTGACCGACATCATCTTGGATTCCATCAGGCAAAAGGATCCCAAAGCTATCACAGCCAAGGTGGTGTCTCTG  2589

Query 2551  GCCAATCGGCTGTGGACCCTGCACATCAGCCCCAAGCAGTTTGTGGTAGATTTGCTGGCCATCACCGGCTTCAA  2624
            |||.|.||.||||||||.|||.|||||||||||||||||||.|||||.|||.|||||||||||.|.||||||||
Sbjct 2590  GCCTACCGACTGTGGACACTGAACATCAGCCCCAAGCAGTTCGTGGTGGATCTGCTGGCCATCGCTGGCTTCAA  2663

Query 2625  GGATGACCGGCACACCCAGGAGCGCCTGTACAGCTGGGTGGAGCTTACACTGCCCTTCGCCAGGAAATATGGCC  2698
            |||||||||||||||.||||||||.||||||||.|||||.|||||.||||||||.||||||||.||||||||||
Sbjct 2664  GGATGACCGGCACACTCAGGAGCGTCTGTACAGTTGGGTAGAGCTCACACTGCCTTTCGCCAGAAAATATGGCC  2737

Query 2699  GATGCATGGACCTGCTCATCCAGAGGGGCCTGTCTAGGTCTGTCTCTTACTCCATCCTGGGAAAGTACCTACAA  2772
            |.|||.||||||||||||||||||||||.|||||.||||||||||||||.||..|||||||.|||||..||||.
Sbjct 2738  GTTGCGTGGACCTGCTCATCCAGAGGGGACTGTCCAGGTCTGTCTCTTATTCAGTCCTGGGCAAGTATTTACAC  2811

Query 2773  GAGGAC  2778
            ||||.|
Sbjct 2812  GAGGGC  2817

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