Nucleotide Global Alignment

Description

Query:
TRCN0000465823
Subject:
NR_148224.1
Aligned Length:
2613
Identities:
335
Gaps:
2277

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCGCCATCTTTATGAGGAGAATTCTAGCGGCGCTTTCTCCCGCTCTCGCCTCCGCGCTAGCGCCCTGCTGCTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGGGCGGAAGTAGCGGAGCCGGGCTCGGCCCCCTTAAAGGGACAGGGACTGCTGCAACCTACGGGGTGTACTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGAACGAGGGGTGAAGCGGCCCAGGTGAGGCTCGCCATGGCCAAACAGCTGCAGGCCCGAAGGCTAGACGGGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCGACTACAACCCCTGGGTGGAGTTTGTGAAACTGGCCAGTGAGCATGACGTCGTGAACTTGGGCCAGGGCTTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCGGATTTCCCACCACCAGACTTTGCCGTGGAAGCCTTTCAGCACGCTGTCAGTGGAGACTTCATGCTTAACCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTACACCAAGACATTTGGTTACCCACCACTGACGAAGATCCTGGCAAGTTTCTTTGGGGAGCTGCTGGGTCAGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGATAGACCCGCTCAGGAATGTGCTGGTGACTGTTGGTGGCTATGGGGCCCTGTTCACAGCCTTCCAGGCCCTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTGGACGAAGGAGACGAGGTCATCATCATCGAACCCTTTTTTGACTGCTACGAGCCCATGACAATGATGGCAGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGGTCGTCCTGTGTTTGTGTCCCTGAAGCCGGGTCCCATCCAGAATGGAGAACTGGGTTCCAGCAGCAACTGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGCTGGACCCCATGGAGCTGGCCGGCAAATTCACATCACGCACCAAAGCCCTGGTCCTCAACACCCCCAACAAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCCCTGGGCAAGGTGTTCTCCAGGGAAGAGCTGGAGCTGGTGGCCAGCCTTTGCCAGCAGCATGACGTGGTGTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TATCACTGATGAAGTCTACCAGTGGATGGTCTACGACGGGCACCAGCACATCAGCATTGCCAGCCTCCCTGGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGTGGGAACGGACCCTGACCATCGGCAGCGCCGGCAAGACCTTCAGCGCCACTGGCTGGAAGGTGGGCTGGGTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTGGGTCCAGATCACATCATGAAGCACCTGCGGACCGTGCACCAGAACTCCGTCTTCCACTGCCCCACGCAGAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCAGGCTGCAGTAGCCGAGAGCTTTGAACGGGAGCAGCTGCTCTTCCGCCAACCCAGCAGCTACTTTGTGCAGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCCCGCAGGCCATGCAGCGCTGCCGTGACCACATGATACGTAGCCTACAGTCAGTGGGCCTGAAGCCCATCATC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCTCAGGGCAGCTACTTCCTCATCACAGACATCTCAGACTTCAAGAGGAAGATGCCTGACTTGCCTGGAGCTGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGATGAGCCCTATGACAGACGCTTCGTCAAGTGGATGATCAAGAACAAGAGATGCTGTGTGGGCTGGCAGGATT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCCTGCCTCTTTGGATCTCCATCTTCCCATCTGTACAGTGAGGAGTTGGCCCATTAACTCTTGAGTTCATCCAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GTTTGATCTGTGACTCTAAGGCTTTGTTCTTCTCTGGCTCTGCCCTGACCTGCTCCATGATCCTCCCTCTGTCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GCCTCCCTCTGCCCTCTATACCCAGGGAGGGACTTGGAATGATGTTCTGGGATTCTTTTCTTCTGACTTTGTGT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TTGTTTTTGTTTTGGATGGATTTTCTCTCTTTCGCCCAGGCTGCGGTGAAGTGGCGCAATCTGGCTCACTGCAA  1628

Query    1  ---------------------------------------------------------------ATGCGCCACCA  11
                                                                           |||||||||||
Sbjct 1629  CCTCCACCCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCGCCACCA  1702

Query   12  CACCCGGCCAATTTTTTTATTTTTGGTAGAGACGGGGTTTAGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGA  85
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CACCCGGCCAATTTTTGTATTTTTGGTAGAGACGGGGTTTAGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGA  1776

Query   86  CCTCAGGTGATCCACCCGTCTCAGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCACCTGGCCTTGT  159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CCTCAGGTGATCCACCCGTCTCAGCCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACCGCACCTGGCCTTGT  1850

Query  160  TCCTCTGACTTTGATGCAGCTCTAGGTGCTGGATTGGAGCTAACTCTCCTTCCCCGCCTGGTCGTGGGAACCTC  233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TCCTCTGACTTTGATGCAGCTCTAGGTGCTGGATTGGAGCTAACTCTCCTTCCCCGCCTGGTCGTGGGAACCTC  1924

Query  234  TCTGTCCCCTCCGGAGCCAAGGCCTGCTGGGCCACGAGGCCGTGTTGAGACATGTCCTTCCTCCTCCCCAGGGC  307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TCTGTCCCCTCCGGAGCCAAGGCCTGCTGGGCCACGAGGCCGTGTTGAGACATGTCCTTCCTCCTCCCCAGGGC  1998

Query  308  TTGGTGGCCATCCCTGTCTCCATCTTCTA---------------------------------------------  336
            |||||||||||||||||||||||||||||                                             
Sbjct 1999  TTGGTGGCCATCCCTGTCTCCATCTTCTATAGTGTGCCACATCAGAAGCACTTTGACCACTATATCCGCTTCTG  2072

Query  337  --------------------------------------------------------------------------  336
                                                                                      
Sbjct 2073  TTTTGTGAAGGATGAAGCCACGCTCCAGGCCATGGACGAGAAGCTGCGGAAGTGGAAGGTGGAACTCTAGCCCT  2146

Query  337  --------------------------------------------------------------------------  336
                                                                                      
Sbjct 2147  GAAGTCACGCCTTGGCCCTGACATCCCCACATGCCCGCAGAGATCCTCTTTGAGTGTCTGTCTTTGTCCAGGTT  2220

Query  337  --------------------------------------------------------------------------  336
                                                                                      
Sbjct 2221  TCAGACATTTCTAGGTTGGGGAAGATGCTATTGGGAAACCTCTTCTCCGTGACACAGAATGTTCTGGGTGGGAG  2294

Query  337  --------------------------------------------------------------------------  336
                                                                                      
Sbjct 2295  CCGCCCTTCTTCATCTTAGAGAACCAAGTGCCTCCTGTCTGAAAGGTGAGGGTGGCCTGACCTGGGCCTCTCCC  2368

Query  337  --------------------------------------------------------------------------  336
                                                                                      
Sbjct 2369  TGCCCCTCCATAGGTGGGTTTGTAGGGTCTTGTGTTGCTTCTGGTCTCTCCAGGCTTGGCTGAGACGGACGGTA  2442

Query  337  --------------------------------------------------------------------------  336
                                                                                      
Sbjct 2443  GACTTCCACCATGTACCGATCACATCCCAGCTCTGCATGGCCCCTGCTAAGGCTCAGGTATAACCTCACCTTCC  2516

Query  337  --------------------------------------------------------------------------  336
                                                                                      
Sbjct 2517  CTGGCTCATCTTGGCCTTGGGGAGTTGCCTTTAGGCTTGAGTCCTCAAGCCTCTCCTTTTCGTCCATAATAAAA  2590

Query  337  -----------------------  336
                                   
Sbjct 2591  TGTTTAAGTTATTAAGATCCTTA  2613

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.