Nucleotide Global Alignment

Description

Query:
TRCN0000465829
Subject:
NR_136509.2
Aligned Length:
4501
Identities:
1811
Gaps:
2690

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA  148

Query    1  -----------ATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA  63
                       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA  222

Query   64  GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG  137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG  296

Query  138  TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT  211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT  370

Query  212  GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG  285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG  444

Query  286  ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT  359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT  518

Query  360  GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT  433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT  592

Query  434  TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA  507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA  666

Query  508  AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAGTTTTAGATGTTGAGACTGGAAATGAGTATGGGAA  581
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAGTTTTAGATGTTGAGACTGGAAATGAGTATGGGAA  740

Query  582  TTTAAAGCAAGAAGTTTCTGAAGAAATGGAACCACATGGGAAGACATCCAGTAAATTTGAAAATGATATGTCCA  655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TTTAAAGCAAGAAGTTTCTGAAGAAATGGAACCACATGGGAAGACATCCAGTAAATTTGAAAATGATATGTCCA  814

Query  656  AGTCTGCTAGGTGTGGAGAAACTCGTGAACCTGAAGAAATAACAGAAGAGCCCTCTGCTTGCTCCAGAGAAGAT  729
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGTCTGCTAGGTGTGGAGAAACTCGTGAACCTGAAGAAATAACAGAAGAGCCCTCTGCTTGCTCCAGAGAAGAT  888

Query  730  AAACAACCTACCTGTGATGAAAATGGAGTAAGCCTGACTGAGAACTCTGACCATACTGAACATCAGAGAATCTG  803
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AAACAACCTACCTGTGATGAAAATGGAGTAAGCCTGACTGAGAACTCTGACCATACTGAACATCAGAGAATCTG  962

Query  804  TCCAGGAGAAGAATCTTACGGATGTGATGACTGTGGAAAAGCTTTTAGTCAGCACTCACACCTCATAGAACATC  877
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TCCAGGAGAAGAATCTTACGGATGTGATGACTGTGGAAAAGCTTTTAGTCAGCACTCACACCTCATAGAACATC  1036

Query  878  AGAGGATCCATACTGGAGATAGACCCTACAAATGCGAAGAATGTGGAAAAGCTTTCCGTGGGAGAACTGTGCTT  951
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AGAGGATCCATACTGGAGATAGACCCTACAAATGCGAAGAATGTGGAAAAGCTTTCCGTGGGAGAACTGTGCTT  1110

Query  952  ATTCGACACAAAATAATACACACTGGAGAGAAACCGTATAAGTGTAATGAATGTGGCAAAGCCTTTGGCCGGTG  1025
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATTCGACACAAAATAATACACACTGGAGAGAAACCGTATAAGTGTAATGAATGTGGCAAAGCCTTTGGCCGGTG  1184

Query 1026  GTCAGCTCTTAACCAACATCAGAGACTTCACACAGGAGAAAAACACTATCACTGTAATGACTGTGGCAAAGCCT  1099
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  GTCAGCTCTTAACCAACATCAGAGACTTCACACAGGAGAAAAACACTATCACTGTAATGACTGTGGCAAAGCCT  1258

Query 1100  TTAGTCAGAAAGCAGGCCTCTTTCACCATATCAAGATCCACACAAGAGACAAACCTTATCAGTGCACTCAGTGT  1173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TTAGTCAGAAAGCAGGCCTCTTTCACCATATCAAGATCCACACAAGAGACAAACCTTATCAGTGCACTCAGTGT  1332

Query 1174  AATAAAAGTTTTAGTCGGCGTTCCATACTTACTCAGCATCAAGGAGTTCATACCGGCGCCAAGCCGTATGAGTG  1247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AATAAAAGTTTTAGTCGGCGTTCCATACTTACTCAGCATCAAGGAGTTCATACCGGCGCCAAGCCGTATGAGTG  1406

Query 1248  CAACGAGTGTGGAAAAGCCTTTGTTTATAACTCATCCCTTGTTTCCCATCAGGAAATCCACCACAAAGAAAAAT  1321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CAACGAGTGTGGAAAAGCCTTTGTTTATAACTCATCCCTTGTTTCCCATCAGGAAATCCACCACAAAGAAAAAT  1480

Query 1322  GCTATCAGTGTAAGGAATGTGGGAAATCCTTCAGTCAGAGTGGCCTTATTCAGCATCAGAGAATTCACACTGGG  1395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GCTATCAGTGTAAGGAATGTGGGAAATCCTTCAGTCAGAGTGGCCTTATTCAGCATCAGAGAATTCACACTGGG  1554

Query 1396  GAAAAACCCTACAAATGTGACGTATGTGAAAAAGCCTTTATTCAAAGGACAAGTCTTACAGAACATCAGCGAAT  1469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GAAAAACCCTACAAATGTGACGTATGTGAAAAAGCCTTTATTCAAAGGACAAGTCTTACAGAACATCAGCGAAT  1628

Query 1470  TCACACTGGAGAAAGACCCTATAAATGTGATAAGTGTGGGAAGGCGTTTACTCAAAGATCAGTCCTCACGGAAC  1543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TCACACTGGAGAAAGACCCTATAAATGTGATAAGTGTGGGAAGGCGTTTACTCAAAGATCAGTCCTCACGGAAC  1702

Query 1544  ATCAGAGAATCCACACTGGAGAGAGGCCCTACAAGTGTGATGAGTGTGGGAATGCCTTCCGAGGAATCACCAGC  1617
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  ATCAGAGAATCCACACTGGAGAGAGGCCCTACAAGTGTGATGAGTGTGGGAATGCCTTCCGAGGAATCACCAGC  1776

Query 1618  CTCATTCAGCATCAGAGAATCCACACTGGGGAGAAGCCCTACCAATGTGATGAGTGTGGAAAAGCCTTCAGACA  1691
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CTCATTCAGCATCAGAGAATCCACACTGGGGAGAAGCCCTACCAATGTGATGAGTGTGGAAAAGCCTTCAGACA  1850

Query 1692  GA------------------------------------------------------------------------  1693
            ||                                                                        
Sbjct 1851  GAGGTCAGATCTTAGTAAACACCAGAGAATCCATAATAGACGTGGTACCTATGTATGTAAAGAGTGTGGGAAAT  1924

Query 1694  --------------------------------------------------------------------------  1693
                                                                                      
Sbjct 1925  CATTCAGGCAGAACTCAGCTCTTACTCAACATCAGACTATCCACAAAGGAGAAAAATCTGTTTCTGTGTGATGA  1998

Query 1694  --------------------------------GGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACT  1735
                                            ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CTACAGGGAAGTTATCTCACAGAGTTCAGGCCGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACT  2072

Query 1736  CTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTG-TTCAGGAGAGAT  1808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2073  CTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGAT  2146

Query 1809  CTC-----------------------------------------------------------------------  1811
            |||                                                                       
Sbjct 2147  CTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAG  2220

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2221  GTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTG  2294

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2295  GGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAG  2368

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2369  TAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGC  2442

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2443  AGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATG  2516

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2517  CTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTAT  2590

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2591  GGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTT  2664

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2665  TTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACC  2738

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2739  ATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGC  2812

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2813  ATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAG  2886

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2887  ACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCT  2960

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 2961  TGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGT  3034

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3035  TGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTG  3108

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3109  TATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGC  3182

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3183  AAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCA  3256

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3257  AGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAA  3330

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3331  TAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTT  3404

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3405  CATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGT  3478

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3479  TTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAAT  3552

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3553  CACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTG  3626

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3627  AGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTT  3700

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3701  CTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCG  3774

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3775  GCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGG  3848

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3849  CACTTGCCACCATTCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC  3922

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3923  TCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGC  3996

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 3997  CCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCT  4070

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 4071  TATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTA  4144

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 4145  GGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCT  4218

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 4219  TATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTC  4292

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 4293  TAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATG  4366

Query 1812  --------------------------------------------------------------------------  1811
                                                                                      
Sbjct 4367  GACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATA  4440

Query 1812  -------------------------------------------------------------  1811
                                                                         
Sbjct 4441  AAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA  4501

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