Nucleotide Global Alignment
Description
- Query:
- TRCN0000465871
- Subject:
- NR_004859.1
- Aligned Length:
- 4522
- Identities:
- 433
- Gaps:
- 4079
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCGGTGCTCAGTGGCTAGCCGAATAGCCGTGTTTGGGACCTGGGCTCGGGCTTCTTGCGTCCCCGCTAAGAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGTCACGGGGCCGAATCGTCCGTATTCTCTCAGCTTCAAGCTCCTCTACTTTTCAACCAGGTCACTAGCCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACTCCTCTTATCAAACTTCCGGAACTGCCACCCCACCAGTGACTCCACAGGCACCAGGGCATGCAACAGGGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACAGGAAGGCTCTCTTCTTCACCTCAAGCCTGCTGGGCTAACACTTGCGATTTTTACTAGAGTTAACTTTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAATGTATGTCTCTGACTCTAGAATTTCAAGAGAAGTTCCACTTAGTGACTCCTAAGTGGAAGTTCTAAGATGG 370
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 371 CTTCCCAGTGAGGTGATGAAGAGGTTTGAGCTTTAGAGTGCGGTTGCAAAGCTCTTCTCTGACCTGAACAATGG 444
Query 5 CTGTAGCTGTGGACCAACAAATCCAGACTCCTTCAGTACAAGATCTCCAAATAGTTAAACTGGAAGAAGATTCC 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGTAGCTGTGGACCAACAAATCCAGACTCCTTCAGTACAAGATCTCCAAATAGTTAAACTGGAAGAAGATTCC 518
Query 79 CACTGGGAGCAGGAAATTTCCCTTCAAGGGAATTACCCTGGACCAGAGACATCCTGCCAGAGCTTTTGGCATTT 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACTGGGAGCAGGAAATTTCCCTTCAAGGGAATTACCCTGGACCAGAGACATCCTGCCAGAGCTTTTGGCATTT 592
Query 153 CCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCTCCAGCTCCAGAAGCTCTGTTGTCAGTGGCTAAGGC 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCTCCAGCTCCAGAAGCTCTGTTGTCAGTGGCTAAGGC 666
Query 227 CAGAGAAGTGTACAAAAGAGCAGATCCTGGAGTTGCTGGTCCTAGAACAGTTCCCGACTGTCCTTCTCCAGGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CAGAGAAGTGTACAAAAGAGCAGATCCTGGAGTTGCTGGTCCTAGAACAGTTCCCGACTGTCCTTCTCCAGGAG 740
Query 301 ATCCAGATCTGGGTCAGACAGCAGCATCCGGAGAGTGGAGAGGAGGCAGTGGCCCTGGTGGAAGACTTGCAGAA 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCCAGATCTGGGTCAGACAGCAGCATCCGGAGAGTGGAGAGGAGGCAGTGGCCCTGGTGGAAGACTTGCAGAA 814
Query 375 AGAACCTGGAAGACAGAGGCTGGAGC-----------------------------CCTGC----CTGATGTGGC 415
|||||||||||||||||||||||||| ||||| |||..||.||
Sbjct 815 AGAACCTGGAAGACAGAGGCTGGAGCCTCGGGCGAGGCCGTCCGGCCGCACCCCTCCTGCTCAGCTGCGGTCGC 888
Query 416 TCTGGGAATTCC--TGCAGAGAAGAGCAGGGGTGGCCAGGAGA------------------------------- 456
..||| || || |.|||.|.| ||||.||.||
Sbjct 889 CATGG-----CCAATG------ACAGCTGCG--GGCCCGGCGAGCCGAGCTCGAGCGAGCGAGACCGGCAGTAC 949
Query 457 -------------------------------------------------------------------------- 456
Sbjct 950 TGCGAGCTGTGCGGGAAGATGGAGAACCTGCTGCGCTGCAGCCGCAGCTCCTTCTGCTGCAAGGAGCGCCAGCG 1023
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1024 CCAGGACTGGAAGAAGCACAAGCTCGTGTGCCAGGGCAGCGAGGGCGCCCTCGGCCACGGAGGGGGCCCTCACC 1097
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1098 AGGACTCCGGCCCCGCGCCGCCCGCTGCAGCGCCGCCGTCCAGGGACCGGGCCCTGGAGGCCAGGAAGGCAGCG 1171
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1172 AGGCGCCGGGACAGCGCCTCCGGGGACGCAGCCAAGGCAAAGGCCAAGTCCGCGGCCGACCCCGCGGCGGCCGC 1245
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1246 GTCCCCGCCTCGCGCGTCCCCGGGCCGGACAAAAGCCATGGCTGCTTGTTATCCGGTCAATGGAACGGGTTATG 1319
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1320 TACGTCATGTTGATAATCCAAATGGAGACGGAAGACGTGTGAAATGTATTACATTACGTTAAAGAACGGGATGC 1393
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1394 CAAGCCCTGCCTGATGTGGCTCTGGGAATTCCTGCAGAGAAGAGCAGGGGTGGCCAGGAGATAGTGAGCAGCTC 1467
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1468 CCAGGAGGCATGGAGGGATCCAGAACCTGGACTGAAGAACCACCTAGAAATAACTCAGCAGAATTCTGAAAATG 1541
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1542 AGGTCACGCTGGATTTTCCAATCCATAGGCCCAAAGTGAACTCCCACGTGGAGTAGGATGAAAACCCACAGCAT 1615
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1616 CTAGATCTTCAAATTCTGGAGAAAAAGAGAGTGTGAAAGACTGCTCAGTGGCTGGGGTGAGAGTCAAGTCTGGC 1689
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1690 CAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGCCCTGGAGGATGAGAAGGTGGC 1763
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1764 AGGAGTGCACTGGGGATACAAAGAAACCAAGATTTTTCTGGGAATTCTCAGAGGCCTGGATCCACGAAAAACTC 1837
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1838 CGCACCTGCCATCGAAACCACCAGGTGTACCGGATTATGGCTGAGCAGCTGTGAGAACATGGCTTCCTGTGGAC 1911
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1912 CCTGGAGCAATGTTGCTATCGGTTCAAAAACCTCCTGACCGACTACTGCAAAGCCAGGAGCACCTACACACCAG 1985
Query 457 -------------------------------------------------------------------------- 456
Sbjct 1986 GCACCAGTGTCTTCTATGATGAGATGGATGCCCTGTTGAGTCTTGGGGCACTTTCTAACACCTTTGATGCCTTA 2059
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2060 GAGGTGGTAGGAGGCCTTCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGGCATAGCACTAGAAGATGTGGC 2133
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2134 GGGATGGTAATGAAATAGTGGAGGAGTCTCAAGAGGAATCCTGGAGGCTTGGTCCCCAGGCCTTGAGGTGGAAT 2207
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2208 CCCAGTGGCAACTCTCCCCCACAATGGACCTCAGAGCAGTGGGAGCGACGCAGTCCTGTGGGAAGCATTCAGGC 2281
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2282 TCAGAATCAGGAGATGTGATTATTGTCCTGGCTCTGTTATGACTAATTTGGGTCTGGAATGGCCTCATCGGGGG 2355
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2356 AAAAATTGGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATTGCTTGACTCAACCCTCTACTG 2429
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2430 AACCAGTAGTCCAGGGTGGCTCACAAAGACCACTTTGAGGCTCTTGCTCTGCTCTTTAGCCAAGGAGTCTCCCT 2503
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2504 TCCTGCCTTCAGTAACAACATTACAGGAAGAGAGGAGAGAAAGGTAGGAGTTAAAGATCCAGTCATTTGTTTCC 2577
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2578 ATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCAAGCCTGTAGTCCCAGCTACTCGGGAGGCTGGGGCAGGA 2651
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2652 GAATCACTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCTGTGATCATGCCACTGCATTCCAGCCTGGGCGACAG 2725
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2726 AGTGAGACCCAGACTCAGCTGAAAAATAATAATATTATTAAAAGAATTTAAAATAAAGTGTTCCATAGATGTGA 2799
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2800 ACCCTGCGTAGATTATACACACCAGTCTGCCATTTAAAAGGTTTGTTGTTCTTGGGCAACCTCTTTAAATACCC 2873
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2874 TTAGCCTCCATTTTCTCATCTGGACAGTGGACATTGTGATGGTTTCTACCTCCCTGGGCTGTTATGAGGATCCT 2947
Query 457 -------------------------------------------------------------------------- 456
Sbjct 2948 GACACAGTATTAGCACTTGGCAAACGTTAGTTTTCATTATCATCATCATTATAATTATTATGAAAATAGATAAG 3021
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3022 GGCATTATCCTGTACCCTCAAAGGAGTAAAAGGGGGAAAATGAGTCATTAAACTTTCTCTTCTGGGAACTAGAC 3095
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3096 CTTCTTGAGAGGCACTATCATTCTCATTTCACCTGTCACTTCCAGACATGGGAGCAGAAAGTGAATTTCAGAAC 3169
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3170 TCCATGTCCCCTCCTGCTTTTCTCTGAGCAGGACTTCCAGTTCCCCAGCCAGATGGGGTCACAATGCTGCAGAA 3243
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3244 AAGTGAAGAGCTTTGGAATGAAGATCTCCCGGACTTCAAGGAGATTCAGAAAACGTCCAGTGCAGGTGGGAAAT 3317
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3318 GAATGGGAGCTAGCATTCCACCAACAAAGTCAGCCCTGGGATTCTAAACTCGGACAAGCCAGCACTGGTTAAGG 3391
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3392 GCTGAGGGGAACCAGGCACTCAGTGCACCCAGTTTACTATTCTGTGGTGTGGAAAGCACAGGACTTGAGAAGCA 3465
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3466 GGTGGCACCCAGGAAAGCCTGTTCCCCTAAGTAAGTTTGAACTTTAGTTACTTGAAAAAAGGTATAACTGAATT 3539
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3540 ATGAGTGTTTATGATTTTATCTTTATTTTATTTTTTTTGAGATGGAGTCTCACCCTGTCACCCAGGCTGGAATG 3613
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3614 CAGTGGCACAATCTCGGTTCACTGCAGCCTCTACCTCTCAGGTTCAAGCAATTCTCCTGCCTCACCCTCCTGAG 3687
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3688 TAGTGGGGATTACAGGTGTGCCACCACCATGCCCGTCTCTAATTTTTATATTTTTAGTAGAGACGGGGTTTCAC 3761
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3762 CATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCCACCTTGGCCCCCCACAAAGTGCTGGG 3835
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3836 ATTACAGGCGTGAGCCACTGTGCCTGGTCTATCTTTAAATTCCTATCTGAATTTGTTTAGGTTTTTTAAATAAA 3909
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3910 AATCTTTCTTTTTTTTTAGAGACAGGGGTTCACCATGGTGCCCAGGCTGATCTCGAACTCCTCCTGGACTCAAG 3983
Query 457 -------------------------------------------------------------------------- 456
Sbjct 3984 CTATCCTCCCACCTCAGCCTCCCAAAGTACTGGGATTACAGACATGAGCCACATGCTTGACCTGAATTTTAACT 4057
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4058 GCAGTTAATTATCACTTAACCAGCGAATTCACACAGGAGAAATCCCCTGGCCGGGCGCGGTGGCTCACACCTGT 4131
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4132 AATCCCAGCTCTTCGGGAGGCCGAGGTGGGTAGATCACAAGGTCAAGAGATCAAGACCATTCTGGCCAACATGG 4205
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4206 TGAAACTCCGTCTGTACCAAAAATACAAAAATTACCTGGGCATGGTGGTACGTGCCTGTAATCCCAGCTACTTG 4279
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4280 GCAGGCTGAGGCAGGAGCATTGCTTGAACCCATGAGGTGGAGGTTGCAGTGAGCCGAGATCACGCCACTGCACT 4353
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4354 CAAGCCTGGGTGACAGAGCAAGACTCCATCTCTACTACAAAAAAAAAAAAAAAAAAAATTCAACCACCTTAGGA 4427
Query 457 -------------------------------------------------------------------------- 456
Sbjct 4428 AGCCTCTCATTTATGTATTTCTAGCATGTAATTAGTGTTGCACATGGGAAGGGCTAATAGATGCTGACAGAGTG 4501
Query 457 -------- 456
Sbjct 4502 AACAACTT 4509
