Nucleotide Global Alignment

Description

Query:
TRCN0000465896
Subject:
NM_001310544.1
Aligned Length:
1038
Identities:
818
Gaps:
135

Alignment

Query    1  ATGATCCTGACTCCGATCAAGGCCTACAGCTCCCCGAGCACCACCCCCGAGGCTCGCCGCCGGGAGCCCCAGGC  74
            |||||||||||.||.|||||||||||||||||.||.||.||||||||.||||..|||.||||||          
Sbjct    1  ATGATCCTGACACCCATCAAGGCCTACAGCTCTCCCAGTACCACCCCTGAGGTGCGCTGCCGGG----------  64

Query   75  CCCGCGTCAGCCCTCACTGATGGGCCCCGAGAGCCAGAGCCCCGACTGCAAAGATGGGGCCGCAGC---CACTG  145
                    ||||||||||||||      |||||||..|||||.|||||||||||..|.||.|||||   |||..
Sbjct   65  --------AGCCCTCACTGATG------GAGAGCCCAAGCCCTGACTGCAAAGACAGCGCTGCAGCAGTCACCA  124

Query  146  GCGCCACGGCCACCCCCTCGGCCGGGGCCAGCGGGGGGCTCCAGCCGCACCAGCTGAGCAGCTGCGATGGGGAG  219
            |||||||.||||...||||.|||||.||||||||.||.||.||.||.|.||||||||||||||||||.||.|||
Sbjct  125  GCGCCACAGCCAGTGCCTCAGCCGGTGCCAGCGGTGGACTGCAACCACCCCAGCTGAGCAGCTGCGACGGAGAG  198

Query  220  CTGGCCGTCGCCCCCCTGCCAGAGGGGGACCTCCCCGGGCAGTTCACACGCGTCATGGGGAAAGTGTGCACACA  293
            |||||.||||||||.|||||.||||||||||||||.|||||||||||.||.|||||||||||||||||||||||
Sbjct  199  CTGGCTGTCGCCCCTCTGCCGGAGGGGGACCTCCCGGGGCAGTTCACCCGAGTCATGGGGAAAGTGTGCACACA  272

Query  294  GCTCTTGGTCTCCAGACCTGATGAGGAAAATATAAGTTCCTATTTACAGCTCATAGACAAGTGTCTAATTCATG  367
            ||||||||||||||||||.|||||.|||||||||||.||||||.||||||||.|||||||||||||..||||||
Sbjct  273  GCTCTTGGTCTCCAGACCCGATGAAGAAAATATAAGCTCCTATCTACAGCTCTTAGACAAGTGTCTTGTTCATG  346

Query  368  AGGCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTC  441
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  347  AGGCATTTACAGAGACACAGAAAAAAAGATTGTTGTCATGGAAACAGCAGGTGCAGAAGCTCTTTCGGTCTTTC  420

Query  442  CCTCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCGAGGCTTTGGGCAATCCAACTCCCT  515
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct  421  CCTCGGAAAACCCTTCTAGACATATCAGGATATCGACAGCAAAGAAATCGTGGCTTTGGGCAGTCCAACTCCCT  494

Query  516  CCCGACGGCTGGCTCTGTGGGCGGTGGCATGGGCAGACGGAACCCGCGCCAGTACCAGATCCCCTCTCGGAACG  589
            |||.||.||..|||||||||||.|.||||||||||||||||||||.||.||||||||||||.|.||||||||.|
Sbjct  495  CCCAACAGCCAGCTCTGTGGGCAGCGGCATGGGCAGACGGAACCCACGACAGTACCAGATCGCATCTCGGAATG  568

Query  590  TCCCTTCCGCCCGCCTGGGCCTCTTGGGCACCAGTGGATTCGTCAGCTCCAACCAGCGCAACACCACAGCTACC  663
            ||||||||||||||||.||.|||.||||||||||||||||.||||||||||||||||||.|||||.|.||.|.|
Sbjct  569  TCCCTTCCGCCCGCCTTGGTCTCCTGGGCACCAGTGGATTTGTCAGCTCCAACCAGCGCCACACCGCTGCCAAC  642

Query  664  CCCACCATCATGAAACAAGGAAGACAGAACCTGTGGTTTGCCAACCCCGGGGGCAGCAATAGCATGCCAAGCCG  737
            ||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||||||||.|||||
Sbjct  643  CCCACCATCATGAAACAAGGAAGACAGAACCTCTGGTTTGCCAACCCTGGGGGCAGCAACAGCATGCCCAGCCG  716

Query  738  CACCCACAGCTCAGTCCAGAGGACCCGCTCGCTGCCCGTGCACACTTCCCCACAGAACATGCTGATGTTCCAGC  811
            ||||||||||||.|||||||.|||||||||||||||||||||.|||||||||||.|||||||||||||||||||
Sbjct  717  CACCCACAGCTCCGTCCAGAAGACCCGCTCGCTGCCCGTGCATACTTCCCCACAAAACATGCTGATGTTCCAGC  790

Query  812  AGCCAGGTTCCCAAGTTCACAGTGGACTGTGTTTAACAGACCTTAGAGGTTGGTTGAGCCTGAGTGGAGCCCCT  885
            |.||                                                                      
Sbjct  791  AACC----------------------------------------------------------------------  794

Query  886  TCCATGCCAGCGCTGACAGTCCCCAAGTCCTCCCAGGGAGAATTCCAGCTTCCCGTGACCGAACCTGACATCAA  959
                                                  ||||||.||||||||.|||||.||||||||||||||
Sbjct  795  --------------------------------------AGAATTTCAGCTTCCTGTGACTGAACCTGACATCAA  830

Query  960  CAACAGGCTGGAGTCGTTGTGCCTCAGTATGACCGAACACGCCCTGGGAGACGGGGTTGACCGGACCTCCACCA  1033
            |||.|||||||||||.|||||||||||||||||.||.||.||||||||||||||||||||||||||||||||.|
Sbjct  831  CAATAGGCTGGAGTCCTTGTGCCTCAGTATGACGGAGCATGCCCTGGGAGACGGGGTTGACCGGACCTCCACAA  904

Query 1034  TC  1035
            ||
Sbjct  905  TC  906

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