Nucleotide Global Alignment
Description
- Query:
- TRCN0000465905
- Subject:
- XM_011246826.2
- Aligned Length:
- 3812
- Identities:
- 2105
- Gaps:
- 1403
Alignment
Query 1 ATGGAGCCGCCCGGCGGGAGACAGGGGCCCGGCCGCGGGACCCGGGACAAGAAGAAGGGCCGGAGCCCAGATGA 74
|||||||||.||||||||.|.|.|||||||||||||||.||||||||||||||||||||.||||||||.|||||
Sbjct 1 ATGGAGCCGTCCGGCGGGGGCCTGGGGCCCGGCCGCGGTACCCGGGACAAGAAGAAGGGTCGGAGCCCGGATGA 74
Query 75 GCTGCCCTCGGCGGGCGGCGACGGCGGCAAATCTAAGAAATTTCTGGAGAGATTTACCAGCATGAGAATTAAGA 148
||||||..||.||||||||||||||||||||..|||||||||||||||||||||||||||||||||.|||||||
Sbjct 75 GCTGCCTGCGACGGGCGGCGACGGCGGCAAACATAAGAAATTTCTGGAGAGATTTACCAGCATGAGGATTAAGA 148
Query 149 AGGAGAAGGAAAAGCCCAATTCTGCTCATAGAAATTCTTCTGCATCATATGGGGATGATCCCACAGCACAGTCA 222
|||||||.||||||||||||||||||||||||||.||.||||||||.||.||.|||||.|||||.||.||||||
Sbjct 149 AGGAGAAAGAAAAGCCCAATTCTGCTCATAGAAACTCCTCTGCATCGTACGGAGATGACCCCACTGCTCAGTCA 222
Query 223 TTGCAAGATGTTTCAGATGAACAAGTGCTGGTTCTCTTTGAACAGATGCTGCTGGATATGAACCTGAATGAGGA 296
|||||.||..|.|||||.||.|||||.||.||.||||||||.|||||||||.||||||||||||||||||||||
Sbjct 223 TTGCAGGACATCTCAGACGAGCAAGTTCTTGTCCTCTTTGAGCAGATGCTGGTGGATATGAACCTGAATGAGGA 296
Query 297 GAAACAGCAACCTTTGAGGGAGAAGGACATCATCATCAAGAGGGAGATGGTGTCCCAATACTTGTACACCTCCA 370
|||.|||||.||||||.|.|||||||||||..||||||||||||||||||||||.|||||..||.||||.||||
Sbjct 297 GAAGCAGCAGCCTTTGCGAGAGAAGGACATTGTCATCAAGAGGGAGATGGTGTCGCAATATCTGCACACTTCCA 370
Query 371 AGGCTGGCATGAGCCAGAAGGAGAGCTCTAAGTCTGCCATGATGTATATTCAGGAGTTGAGGTCAGGCTTGCGG 444
||||||||||||.||||||.||||||||||.|||||||||||||||.||.||||||.|||||||.|||||||||
Sbjct 371 AGGCTGGCATGAACCAGAAAGAGAGCTCTAGGTCTGCCATGATGTACATCCAGGAGCTGAGGTCGGGCTTGCGG 444
Query 445 GATATGCCTCTGCTCAGCTGCCTGGAGTCCCTTCGTGTGTCTCTCAACAACAACCCTGTCAGTTGGGTGCAAAC 518
|||||||..|||||.||||||||.|||||||||||.||.|||||||||||.||||||||||||||||||||.||
Sbjct 445 GATATGCACCTGCTTAGCTGCCTTGAGTCCCTTCGAGTCTCTCTCAACAATAACCCTGTCAGTTGGGTGCAGAC 518
Query 519 ATTTGGTGCTGAAGGCTTGGCCTCCTTATTGGACATTCTTAAACGACTTCATGATGAGAAAGAAGAGACTGCTG 592
||||||||||||.|||.|.|||||||||||||||||.||.||||||||.||||||||||||||.||||||.|||
Sbjct 519 ATTTGGTGCTGAGGGCCTAGCCTCCTTATTGGACATCCTCAAACGACTCCATGATGAGAAAGAGGAGACTTCTG 592
Query 593 GGAGTTACGATAGCCGGAACAAGCATGAGATCATTCGCTGCTTGAAAGCTTTTATGAACAACAAGTTTGGAATC 666
|.|..|||||.|||||.|||.||||||||||.||.|||||.|||||.|||||.|||||||||||||||||||||
Sbjct 593 GAAACTACGACAGCCGAAACCAGCATGAGATTATCCGCTGTTTGAAGGCTTTCATGAACAACAAGTTTGGAATC 666
Query 667 AAGACCATGTTGGAGACAGAAGAAGGAATCCTACTGCTGGTCAGAGCCATGGATCCTGCTGTTCCCAACATGAT 740
||.||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 667 AAAACTATGTTGGAGACGGAAGAAGGAATCCTACTGCTGGTCAGAGCCATGGATCCTGCTGTTCCCAATATGAT 740
Query 741 GATTGATGCAGCTAAGCTGCTTTCTGCTCTTTGTATTCTACCGCAGCCAGAGGACATGAATGAAAGGGTTTTGG 814
||||||||||||.||||||||.|||||.||.|||||.||.||||||||.|||||||||||||||.|.|||.|.|
Sbjct 741 GATTGATGCAGCAAAGCTGCTGTCTGCCCTCTGTATCCTGCCGCAGCCGGAGGACATGAATGAACGAGTTCTAG 814
Query 815 AGGCAATGACAGAAAGAGCTGAGATGGATGAAGTGGAACGTTTCCAGCCGCTGCTGGATGGATTAAAAAGTGGA 888
|||||||||||||.||||||||.||||||||.||.|||||.||||||||.||.|||||.||||||||||||||.
Sbjct 815 AGGCAATGACAGAGAGAGCTGAAATGGATGAGGTCGAACGCTTCCAGCCACTTCTGGACGGATTAAAAAGTGGG 888
Query 889 ACCACTATTGCACTGAAGGTTGGATGCCTACAGCTGATCAATGCTCTCATCACACCAGCGGAGGAACTTGACTT 962
|||.|||||||.||.||.||.||||||||||||||.|||||||||||||||||.|||||.||||||||.|||||
Sbjct 889 ACCTCTATTGCCCTCAAAGTGGGATGCCTACAGCTCATCAATGCTCTCATCACTCCAGCTGAGGAACTGGACTT 962
Query 963 CCGAGTTCACATCAGAAGTGAACTGATGCGTTTGGGGCTACATCAGGTGTTGCAGGACCTTCGAGAGATTGAAA 1036
|||||||||||||.|||||||.||||||||..|||||||.|||||||||||||||||.||||||||||||||||
Sbjct 963 CCGAGTTCACATCCGAAGTGAGCTGATGCGCCTGGGGCTGCATCAGGTGTTGCAGGAGCTTCGAGAGATTGAAA 1036
Query 1037 ATGAAGATATGAGAGTGCAACTAAATGTGTTTGATGAACAAGGGGAAGAGGATTCCTATGACCTGAAGGGACGG 1110
||||||||||||.|||.||.||....||||||||||||||||||||.||.||||.||.|||.||||||||||||
Sbjct 1037 ATGAAGATATGAAAGTACAGCTGTGCGTGTTTGATGAACAAGGGGATGAAGATTTCTTTGATCTGAAGGGACGG 1110
Query 1111 CTGGATGACATTCGCATGGAGATGGATGACTTTAATGAAGTCTTTCAGATTCTCTTAAACACAGTGAAGGATTC 1184
||||||||.||.|||||||||||||||||||||..||||||.|||||||||.|.||||||||||||||.|||||
Sbjct 1111 CTGGATGATATCCGCATGGAGATGGATGACTTTGGTGAAGTTTTTCAGATTATTTTAAACACAGTGAAAGATTC 1184
Query 1185 AAAGGCAGAGCCACACTTCCTTTCCATCCTGCAGCACTTACTCTTGGTCCGAAATGACTATGAGGCCAGACCTC 1258
|||||||||||||||||||||.||.|||.|||||||..|.||.||||||||||||||.|||||.|||||.||.|
Sbjct 1185 AAAGGCAGAGCCACACTTCCTGTCTATCTTGCAGCATCTCCTGTTGGTCCGAAATGATTATGAAGCCAGGCCAC 1258
Query 1259 AGTACTATAAGTTGATTGAAGAATGTATTTCCCAGATAGTTCTGCACAAGAACGGGGCTGATCCTGACTTCAAG 1332
||||||||||..||||||||||||||.||||.|||||||||||.|||||.||.||..|||||||||||||||||
Sbjct 1259 AGTACTATAAACTGATTGAAGAATGTGTTTCTCAGATAGTTCTACACAAAAATGGAACTGATCCTGACTTCAAG 1332
Query 1333 TGCCGGCACCTCCAGATTGAGATTGAGGGATTAATTGATCAAATGATTGATAAGACAAAGGTGGAGAAATCTGA 1406
|||||.|||||.||||||||.||||||.||||..|||||||||||||||||||.|||||||||||.||||||||
Sbjct 1333 TGCCGACACCTGCAGATTGATATTGAGAGATTGGTTGATCAAATGATTGATAAAACAAAGGTGGAAAAATCTGA 1406
Query 1407 AGCCAAAGCTGCAGAGCTGGAAAAGAAGTTGGACTCAGAGTTAACAGCCCGACATGAGCTACAGGTGGAAATGA 1480
.|||||||||.|||||||||||||.||||||||.|||||.||||||||.||.||.|||.||||.||.|||||||
Sbjct 1407 GGCCAAAGCTACAGAGCTGGAAAAAAAGTTGGATTCAGAATTAACAGCGCGGCACGAGTTACAAGTAGAAATGA 1480
Query 1481 AAAAGATGGAAAGTGACTTTGAGCAGAAGCTTCAAGATCTTCAGGGAGAAAAAGATGCACTGCATTCTGAAAAG 1554
||||||||||||.|||||||||||||||.|||||.||||||||.||||||||.|||||..||.|||||||||||
Sbjct 1481 AAAAGATGGAAAATGACTTTGAGCAGAAACTTCAGGATCTTCAAGGAGAAAAGGATGCCTTGGATTCTGAAAAG 1554
Query 1555 CAGCAAATTGCCACAGAGAAACAGGACCTGGAAGCAGAGGTGTCCCAGCTCACAGGAGAGGTTGCCAAGCTGAC 1628
|||||.||..|..||.|||||||.||||||||.||||||||||||.||||.|||||||||||||||||||||.|
Sbjct 1555 CAGCAGATCACTGCACAGAAACAAGACCTGGAGGCAGAGGTGTCCAAGCTGACAGGAGAGGTTGCCAAGCTGTC 1628
Query 1629 AAAGGAACTGGAAGATGCCAAGAAAGAAATGGCTTCCCTCTCTGCGGCAGCTATTACTGTACCTCCTTCTGTTC 1702
|||.|||||.||||||||||||||.|||||||||||.|||||| |||.|...|||..|.|||||||||.
Sbjct 1629 AAAAGAACTAGAAGATGCCAAGAATGAAATGGCTTCTCTCTCT------GCTGTGGTTGTTGCACCTTCTGTTT 1696
Query 1703 CTAGTCGTGCTCCTGTTCCCCCTGCCCCTCCTTTACCTGGTGACTCTGGCACTATTATTCCA------------ 1764
||||..|||||.||||||||||||||||||||.|.||||||||||||||||||.||||||||
Sbjct 1697 CTAGCAGTGCTGCTGTTCCCCCTGCCCCTCCTCTGCCTGGTGACTCTGGCACTGTTATTCCACCTCCCCCACCC 1770
Query 1765 CCACCACCTGCTCCTG--GGGATAGTACCAC--TCCTCCTCCTCCTCCTCC---TCCT------CCTCCTCCAC 1825
|||||.|||..||||| ||..|.||.|||| ||| |||||||..||||| |.|| |||||.||.|
Sbjct 1771 CCACCTCCTCTTCCTGGAGGTGTGGTCCCACCATCC-CCTCCTCTGCCTCCAGGTACTTGTATCCCTCCACCTC 1843
Query 1826 CTCCTTTGCCTGGGGGTGTTTGCAT--CTCCTCACCCCCTTCTTTACCTGGAGGTACTGCTATCTCTCCACCCC 1897
|||||||.|||||.||||.|||.|| |.||||.||||| ..||.|||||..||.||||.|||.|||||||.|
Sbjct 1844 CTCCTTTACCTGGAGGTGCTTGTATACCCCCTCCCCCCC--AGTTGCCTGGCAGTGCTGCCATCCCTCCACCTC 1915
Query 1898 CTCCTTTGTCTGGGGATGCTACCATCCCTCCACCCCCTCCTTTGCCTGAGGGTGTTGGCATCCCTTCACCCTCT 1971
|||||.|..||||.|.||||.|||||||.|||||.||.||||||||||.||.|..||.||||||..||||..|.
Sbjct 1916 CTCCTCTACCTGGAGTTGCTTCCATCCCCCCACCTCCCCCTTTGCCTGGGGCTACTGCCATCCCCCCACCTCCC 1989
Query 1972 TCTTTGCCTGGAGGTACTGCCATCCCCCCACCTCCTCCTTTGCCTGGGAGTGCTAGAATCCCCCCACCACCACC 2045
.||||||||||.|.|||||||||||||||||||||.|||||||||||..||.|..|.||.||.||||||||.||
Sbjct 1990 CCTTTGCCTGGGGCTACTGCCATCCCCCCACCTCCCCCTTTGCCTGGAGGTACAGGTATACCACCACCACCTCC 2063
Query 2046 TCCTTTGCCTGGGAGTGCTGGAATTCCCCCCCCACCTCCTCCCTTGCCTGGAGAAGCAGGAATGCCACCTCCTC 2119
||||||||||||.||||.|||..|| ||||||||.||||||||||||||||.|.|||||.||||.|||||.|
Sbjct 2064 TCCTTTGCCTGGAAGTGTTGGCGTT---CCCCCACCCCCTCCCTTGCCTGGAGGACCAGGACTGCCTCCTCCCC 2134
Query 2120 CTCCCCCTCTTCCTGGTGGTCCTGGAATCCCTCCACCTCCTCCATTTCCCGGAGGCCCTGGCATTCCTCCACCT 2193
|||||||| |||||.||||..||||||||||||||||||
Sbjct 2135 CTCCCCCT------------------------------------TTTCCTGGAGCACCTGGCATTCCTCCACCT 2172
Query 2194 CCACCCGGAATGGGTATGCCTCCACCTCCCCCATTTGGATTTGGAGTTCCTGCAGCCCCAGTTCTGCCATTTGG 2267
|||||.||.|||||..||||||||||||||||.|||||||||||.||||||||.||||||||||||||||||||
Sbjct 2173 CCACCTGGTATGGGCGTGCCTCCACCTCCCCCCTTTGGATTTGGGGTTCCTGCGGCCCCAGTTCTGCCATTTGG 2246
Query 2268 ATTAACCCCCAAAAAGCTTTATAAGCCAGAGGTGCAGCTCCGGAGGCCAAACTGGTCCAAGCTTGTGGCTGAGG 2341
|||||||||||||||..||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 2247 ATTAACCCCCAAAAAAGTTTATAAGCCAGAGGTGCAGCTCCGGAGGCCAAACTGGTCCAAGTTTGTGGCTGAGG 2320
Query 2342 ACCTCTCCCAGGACTGCTTCTGGACAAAGGTGAAGGAGGACCGCTTTGAGAACAATGAACTTTTCGCCAAACTT 2415
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2321 ACCTTTCCCAGGACTGCTTCTGGACAAAGGTGAAGGAGGACCGCTTTGAGAACAATGAACTTTTTGCCAAACTT 2394
Query 2416 ACCCTTACCTTCTCTGCCCAGACCAAGACTTCCAAAGCCAAGAAGGATCAAGAAGGTGGAGAAGAAAAGAAATC 2489
||||||.|||||||.|||||||||||||||||.||||.|...
Sbjct 2395 ACCCTTGCCTTCTCCGCCCAGACCAAGACTTCTAAAGTCTTT-------------------------------- 2436
Query 2490 TGTGCAAAAGAAAAAAGTAAAAGAGTTAAAGGTGTTGGATTCAAAGACAGCCCAGAATCTCTCAATCTTTTTGG 2563
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 2564 GTTCCTTCCGCATGCCCTATCAAGAGATTAAGAATGTCATCCTGGAGGTGAATGAGGCTGTTCTGACTGAGTCT 2637
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 2638 ATGATCCAGAACCTCATTAAGCAAATGCCAGAGCCAGAGCAGTTAAAAATGCTTTCTGAACTGAAGGATGAATA 2711
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 2712 TGATGACCTGGCTGAGTCAGAGCAGTTTGGCGTGGTGATGGGCACTGTGCCCCGACTGCGGCCTCGCCTCAATG 2785
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 2786 CCATTCTCTTCAAGCTACAATTCAGCGAGCAAGTGGAGAATATCAAGCCAGAGATTGTGTCTGTCACTGCTGCA 2859
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 2860 TGTGAGGAGTTACGTAAGAGTGAGAGCTTTTCCAATCTCCTAGAGATTACCTTGCTTGTTGGAAATTACATGAA 2933
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 2934 TGCTGGCTCCAGAAATGCTGGTGCTTTTGGCTTCAATATCAGCTTCCTCTGTAAGCTTCGAGACACCAAGTCCA 3007
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3008 CAGATCAGAAGATGACGTTGTTACACTTCTTGGCTGAGTTGTGTGAGAATGACTATCCCGATGTCCTCAAGTTT 3081
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3082 CCAGACGAGCTTGCCCATGTGGAGAAAGCCAGCCGAGTTTCTGCTGAAAACTTGCAAAAGAACCTAGATCAGAT 3155
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3156 GAAGAAACAAATTTCTGATGTGGAACGTGATGTTCAGAATTTCCCAGCTGCCACAGATGAAAAAGACAAGTTTG 3229
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3230 TTGAAAAAATGACCAGCTTTGTGAAGGATGCACAGGAACAGTATAACAAGCTGCGGATGATGCATTCTAACATG 3303
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3304 GAGACCCTCTATAAGGAGCTGGGCGAGTACTTCCTCTTTGACCCCAAGAAGTTGTCTGTTGAAGAATTTTTCAT 3377
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3378 GGATCTTCACAATTTTCGGAATATGTTTTTGCAAGCAGTCAAGGAGGAGCCGCCCGGCGGGAGACAGAAGAAAA 3451
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3452 GATGAGGCGAGCAAAACTAGCCAAGGAGAAGGCAGAGAAGGAGCGGCTAGAGAAGCAGCAGAAGAGAGAGCAAC 3525
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3526 TCATAGACATGAATGCAGAGGGCGATGAGACAGGTGTGATGGACAGTCTTCTAGAAGCCCTGCAGTCAGGGGCA 3599
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3600 GCATTCCGACGGAAGAGAGGGCCCCGTCAAGCCAACAGGAAGGCCGGGTGTGCAGTCACATCTCTGCTAGCTTC 3673
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3674 GGAGCTGACCAAGGATGATGCCATGGCTGCTGTTCCTGCCAAGGTGTCCAAGAACAGTGAGACATTCCCCACAA 3747
Sbjct 2437 -------------------------------------------------------------------------- 2436
Query 3748 TCCTTGAGGAAGCCAAGGAGTTGGTTGGCCGTGCAAGC 3785
Sbjct 2437 -------------------------------------- 2436
