Nucleotide Global Alignment
Description
- Query:
- TRCN0000465921
- Subject:
- NR_045998.2
- Aligned Length:
- 3515
- Identities:
- 1000
- Gaps:
- 2515
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGACGCTGTGGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTG 74
Query 1 ----------------------ATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGCCTTCGGCAAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT 148
Query 53 TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG 222
Query 127 ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCAATGAGGCAGCTGTGACTGTGTCAAGGGAAGC 200
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCA------------------------------- 265
Query 201 CACGACTCTGACCATAGTCTTCTCTCAGCTTCCACTGCCGTCTCCACAGGAAACCCAGAAGTTCTGTGAACAAG 274
|||||||||||||||||||||||||
Sbjct 266 -------------------------------------------------GAAACCCAGAAGTTCTGTGAACAAG 290
Query 275 TCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGGGATCACCCTGAGAAAG 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 TCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGGGATCACCCTGAGAAAG 364
Query 349 CTGGTACGGGGCGCCACCCTGGACATCGTGGATGGCATGGCTCAGCTCATGGAAGTACTTTCCGTCACTCCAAC 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 CTGGTACGGGGCGCCACCCTGGACATCGTGGATGGCATGGCTCAGCTCATGGAAGTACTTTCCGTCACTCCAAC 438
Query 423 TCAGAGCCCTGAGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATAC 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 TCAGAGCCCTGAGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATAC 512
Query 497 CAAGAGATAACAAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAA 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 CAAGAGATAACAAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAA 586
Query 571 ATGGAGCAGGCTGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAA 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 ATGGAGCAGGCTGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAA 660
Query 645 CCACAATCATGAGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGC 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CCACAATCATGAGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGC 734
Query 719 TCATAATCCCATGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAG 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 TCATAATCCCATGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAG 808
Query 793 AATGGGAAGAAGGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGA 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 AATGGGAAGAAGGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGA 882
Query 867 TGATTTGGCTCTGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTG 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 TGATTTGGCTCTGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTG 956
Query 941 TTTTAAAGAAGGCACTTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTA 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 TTTTAAAGAAGGCACTTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTA 1030
Query 1015 CTTATTAATGCCATTGATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTA-------- 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1031 CTTATTAATGCCATTGATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTT 1104
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1105 CAGGCTCATTTGTACTCTCTTCCCCTCTCATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAG 1178
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1179 AATGCTTGCTGGATTGAAAGGGAGTGCCTATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAG 1252
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1253 GCCAGATTGACACCTATTTATAAACCATATGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATT 1326
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1327 TCTCATTCCTGAGTCATTTCTCAGAGATTCCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGT 1400
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1401 TTTCATTGTAAAGATGTTGATGGTCTCAATAAAATGCTAACTTGCCAGTGATTAAATGAGTGCCCTTCCAAAGT 1474
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1475 TTCTTTTTACCAGAAATACAGTGGATTGAGACTAGAACATTGCTTTCATTTGGGTTTGTAGGTTTAAAAATCTG 1548
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1549 ATTCTAATCAGAAGTATATTTAGAACAAAACACTTTATTTATAAAAGATGACTCCAAAATTCATCTTAGTATTT 1622
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1623 CACCATGTTATATATTATTATCAGCAAGTCCTTCTGAATATTATCACAGATTACTCCATGTCTCTAAAATATAT 1696
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1697 TGGCATTGAGCTCATTTGTTAGGTTTGCCCACCTTATTGAACAGATTTATTTTCCTTATACATACTTGTGTTGT 1770
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1771 CCTTGGTTACGTGTGTCCCCAAATGTAAATACCAAATTTTTATAAATCAAAAATTTTTTAGTGTGTAAGAGATT 1844
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1845 TTATGTAATTTTAAGGGCCTTTTCAGTTCATCCTTTTGCAAAACCATCACCACTTAATTATACTTTTGCATCAG 1918
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1919 TCTAGAAGACTGCATATTGGAAAGCAGTGTAAATCTATAATGATGTATATTCTGGTGAGCTGAATAGGGCATTA 1992
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1993 TGCATGTCCTACAGGTCTCCGCCACCTCTCATGCCCATCATCTTCCTTTTGTAGGTGTAATTCATAACATATGC 2066
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2067 CTTTCTGCTGTCTTTAGGTATAATCAGCAACAGCAGTCATTCTTTGAGTGACTAATGTATACTTGGGGTTGGGG 2140
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2141 TTGAAATTCCTTAAGCCAAATGAGTTTTAGCTTACTGTTTTGAAGTGCCATTTTGTATTGTTAACAAGTGTCAT 2214
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2215 GAAGGGAAGGAACTAAAATCAAACTGACAGAGTGTCAAGGCAACAAAATAACATAAACAAAATAATAACATTGT 2288
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2289 ACAACAGTCTAGTTCTTTTATCCTTTCATATAGAGCCTATTTTTTATATACTTTTATATTTCTCTACTGGACCA 2362
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2363 AATTCATGTTATTAACATCAGACTTTAATTGTGGGATACTTAATGAATATAGAACTCTAATATAAAGACTTACC 2436
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2437 TCTAGCTGAATTATTCTCTCAGGTCCTGTATTGTATAACTTCGTTCAGTCATGTTTGGATCTTTAAGGATAATG 2510
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2511 ATCAGGGAAAGCACTGATCAATGTAATTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCC 2584
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2585 CCAAGCTGGAGTGCAGTGGCACACTCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCTCAAGCAATTCTCTGG 2658
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2659 CTTCAGCCTCTCAAGTAGCTGGGACTACAGATGCACACCACCATGTCCAGCTAATTTTTGTATTTTTAGTAGAG 2732
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2733 ATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACGTCAGCCTCCCA 2806
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2807 AAGTGCTGGGATTACAGATGTGAGCCACCGAGCCCAGCTTGATCAATGTAATTTTAAGATTACCTAAAAATTCC 2880
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2881 ATTTTGGGATAATATCCCACTTCATCAGAAATATTAGAATGATTTAAGTGTTAGGTCCTTTCCCTTATCTGTAA 2954
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2955 GTTAATGAATGTATTAATGAGCAGTAAAATGGTTGCAAAAAACCTGAACCTGAACAATCTGAATGTACTCCTTA 3028
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3029 AAGGTATCTGAGCACCTTTTCAACCTGAATGACTACTCATTTATCTGATAAAGTGATGTAGTTTGGATATTCAA 3102
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3103 CCCTGCAAACCTCATGCTGAAATTGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTGGATCCCTC 3176
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3177 ATGAATGGCTTCGTTCCATTGGTGGGGTAATGAGTAAGTTCTCGCTCTATATGTCCCTCCCCCACCCCAGAGCT 3250
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3251 GGCTGTTAAAACGAGGCTGGCACCTGGCACTTACCCCTACCCCTCAACCCATTCTTGCCCTGTGATCTCTGCTC 3324
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3325 ACGTTGCCTCCCTTCATCTTCCTGCATAAGTGGAAGCAGCCTGAAGCCCTCACTGTTTCTTGTACAGCCTGCAG 3398
Query 1081 ------------------------------------- 1080
Sbjct 3399 AGCCGTGAGCCAAATAAAGCTCTTTTCTTTTAAACTA 3435
