Nucleotide Global Alignment
Description
- Query:
- TRCN0000465978
- Subject:
- NM_001366084.1
- Aligned Length:
- 2124
- Identities:
- 1043
- Gaps:
- 1071
Alignment
Query 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGTCCAAAGTCACAGATGCTATAGTCTGGTATCAAAAGAAGATTGGAGCATATGATCAACAAATATGGGA 74
Query 75 AAAATCTGTTGAACAGAGAGAAATCAAGTTTATTAAACTGGGGCTAAGGAATAAACCAAAGAAAACAGCACATG 148
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 75 AAAATCTGTTGAACAGAGAGAAATCAA------------GGGGCTAAGGAATAAACCAAAGAAAACAGCACATG 136
Query 149 TGAAACCAGACCTCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 137 TGAAACCAGACCTCATAGATGTTGATCTTGTAAGAGGGTCTGCATTTGCAAAGGCAAAGCCTGAAAGTCCTTGG 210
Query 223 ACTTCTCTGACCAGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 211 ACTTCTCTGACCAGAAAGGGAATTGTTCGAGTTGTATTTTTCCCCTTTTTCTTCCGGTGGTGGTTACAAGTAAC 284
Query 297 ATCAAAGGTCATCTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 285 ATCAAAGGTCATCTTTTTCTGGCTTCTTGTCCTTTATCTTCTTCAAGTTGCTGCAATAGTATTATTCTGCTCCA 358
Query 371 CTTCTAGCCCACACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 CTTCTAGCCCACACAGCATACCTCTGACAGAGGTGATTGGGCCGATATGGCTGATGCTGCTCCTGGGAACTGTG 432
Query 445 CATTGCCAGATTGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 433 CATTGCCAGATTGTTTCCACAAGAACACCCAAACCTCCTCTAAGTACAGGGGGTAAAAGAAGAAGGAAATTAAG 506
Query 519 AAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 507 AAAAGCAGCCCATTTGGAAGTACATAGGGAAGGAGATGGTTCTAGTACCACAGATAACACACAAGAGGGAGCAG 580
Query 593 TTCAGAACCACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 581 TTCAGAACCACGGTACAAGCACCTCTCACAGCGTTGGCACTGTCTTCAGAGATCTCTGGCATGCTGCTTTCTTT 654
Query 667 TTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 TTATCAGGATCAAAGAAAGCAAAGAATTCAATTGATAAATCAACTGAAACTGACAATGGCTATGTATCCCTTGA 728
Query 741 TGGGAAGAAGACTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAG 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 TGGGAAGAAGACTGTTAAAAGCGGTGAAGATGGAATACAAAACCATGAACCTCAGTGTGAAACTATTCGACCAG 802
Query 815 AAGAGACAGCCTGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 803 AAGAGACAGCCTGGAACACAGGAACACTGAGGAATGGTCCTAGCAAAGATACCCAAAGGACAATAACAAATGTC 876
Query 889 TCTGATGAAGTCTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 TCTGATGAAGTCTCCAGTGAGGAAGGTCCTGAAACAGGATACTCATTACGTCGTCATGTGGACAGGACTTCTGA 950
Query 963 AGGTGTTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGG-------TATA-----TA 1024
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.| ||
Sbjct 951 AGGTGTTCTTCGGAATAGAAAGTCACACCATTATAAGAAACATTACCCTAATGAGGACGCCCCTAAATCGGGTA 1024
Query 1025 CT--TTG----------TCCTTAAGTGTATACATACA-----------------------TATC---------- 1053
|| ||| |..|.|||| |.||.||| .|||
Sbjct 1025 CTAGTTGCAGCTCTCGCTGTTCAAGT---TCCAGACAGGATTCTGAGAGTGCAAGGCCAGAATCTGAAACAGAA 1095
Query 1054 --TATTTTAT--------ATGTTAC------------------------------------------------- 1068
|.|.|||| .||||||
Sbjct 1096 GATGTGTTATGGGAAGACTTGTTACATTGTGCAGAATGCCATTCATCTTGTACCAGTGAGACAGATGTGGAAAA 1169
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1170 TCATCAGATTAATCCATGTGTGAAAAAAGAATATAGAGATGACCCTTTTCATCAGAGTCATTTGCCCTGGCTCC 1243
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1244 ATAGTTCCCACCCAGGATTAGAAAAAATAAGTGCTATAGTATGGGAAGGTAATGATTGTAAGAAAGCAGACATG 1317
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1318 TCTGTACTTGAAATCAGTGGAATGATAATGAACAGAGTGAACAGCCATATACCAGGAATAGGATACCAGATTTT 1391
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1392 TGGAAATGCAGTCTCTCTCATACTGGGTTTAACTCCATTTGTTTTCCGACTTTCTCAAGCTACAGACTTGGAAC 1465
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1466 AACTCACAGCACATTCTGCTTCAGAACTTTATGTGATTGCATTTGGTTCTAATGAAGATGTCATAGTTCTTTCT 1539
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1540 ATGGTTATAATAAGTTTTGTGGTTCGCGTGTCTCTTGTGTGGATTTTCTTTTTTTTGCTCTGTGTAGCAGAAAG 1613
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1614 AACTTATAAACAGCGTCGAGGTCCTCAGCGATCAGTTGATGTAATAGTTTCATCTGCTTTCTTATTGACTATCT 1687
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1688 CAGTTGTATTTATCTGTTGTGCCCAGCTACTTCATGTACACGAGATCTTCCTTGATTGTCACTACAATTGGGAA 1761
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1762 TTGGTAATCTGGTGCATCTCGTTAACACTTTTTCTCCTAAGATTTGTTACCCTTGGATCAGAAACAAGTAAAAA 1835
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1836 ATATAGTAATACCTCAATATTACTTACTGAACAGATAAACCTCTACTTGAAAATGGAGAAAAAACCTAACAAAA 1909
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1910 AGGAGGAACTGACACTAGTGAATAATGTTTTAAAACTGGCTACTAAACTGCTAAAGGAGTTGGACAGTCCTTTT 1983
Query 1069 -------------------------------------------------------------------------- 1068
Sbjct 1984 AGATTATATGGGCTTACAATGAATCCGCTGCTTTATAACATCACCCAGGTTGTTATCCTGTCAGCTGTTTCTGG 2057
Query 1069 ---------------------------------------------------- 1068
Sbjct 2058 TGTTATCAGTGACTTGCTTGGATTTAATTTAAAGCTATGGAAGATTAAGTCA 2109
