Nucleotide Global Alignment
Description
- Query:
- TRCN0000466008
- Subject:
- XR_002959067.1
- Aligned Length:
- 4244
- Identities:
- 624
- Gaps:
- 3610
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCACCACGCCTGGCTAATTTTTGTATTTTCAGTAGAGATGGGGCTTCATCATGTTGGCCAGGTGGTCCTGAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTGACCTCAAGTAATCTGCCTGCCTTGGCCTTCCAAAATGCTTGGGATTACAGGCGTGAGCCACTGCGCCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCCCTATTTTCTTTTTACAACAGACCTTGGGAAATATTTTCTTCCCCCAAGAGGTTGAGGCCCATGGAATGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTAGGGGCAGGTGGGGTGGTGGTGCTCTGTAGCCTTTAGGACTTCTAGAATCAGGCTTCTGGGCCACCTTCTTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGGTGTATACCTCTTTGTTCCAGACTGACTTTCTGTCTCACAATATCTTCACTATTTCCACAGTTGCAGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACAGGAAACTGAAAGCTGAGGCCAGAAGGGTGGTGTACTGGGGGGAGGGGAAAATTGAGTGTCACTTTGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTGGGGCCCCCATCTAAGGATTGCTGCCTCTGTAGATTCAAAAGCAATAAAACAGCAGCTCATTAACTCTTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTTGTATTTTATTTTCTGTCTTTTTCATGTCTAAATAAAGATTTTTGCTTTGCTGTCCCCAAGTCCCCCTCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTAAAGGAGCTGCAGCTCCTTCTCTCCTTGTTCCCAGCTTTCCTTACCCATCTTTGCTTCTAGGGTTGCAGATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGAGGGACGGGGGATGGACTGCTGAGCTGAAGAGAGGTTTCCAGCCCTCACCTGTGAAAGTCCTGAACATGAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTCATTTGGAGATCTGGTGTCTGGGTTGGAGGGGTGGAGTCACATACGGGAATGGGCACTTATTGCCTATTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTGTGTATCTACGTGATGGGCAAGATTAACTGGTAAGATCTTTTTGTCCCACCCACATCCCCAAGACTTGCAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACAAACTGTACTTGTGTCTGCATCTTGGACACATTTCCATCTCTTTTTATACTTCTCCACTGCAGTCTTCACAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GATGTCTGTGTCATGCCCTCTAGAGAAAGATATGCAAAACCACTTTAACCAGTTTCCCTGCTTCCTCACCTAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTTGGGCCTCTGCTGACAAAAATCCCCCCAGGTCTAATTTTCATTTTCTTCTGGAAGAGGCGGCAAGGAGGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGAACCACTTTCACATTCCTACCCCTCTCCCCGCCCCAAACCCCTTTGAGAAGACAAAAGAACGGAGCTTTTAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGGAAGTCATCACTGAGACACTCCAGACAGGTAGCCCAGATGATTCCAGCTTCATAATCAATAGAACTGCTCCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCAAACGGTCTCCAGTACTCATGAACAGGAAGAGAACAGGGTCTGGGATTGGGGTAAAGAAGGGAGTCGTTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTCTCAGTCCCCATTTCTTCCCCACCCGTCCGTCTCAGACTCCACCGTTTCCTCTCCACTTTTCCAGAATTGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGTATTCTCCTTTAAGGGGTTGGGCATCTCTCCCGCCCTCTCCAGAGTCGACTGAAGTTTCCGAGGAGACTTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCAGGCTGGGCTGGACACACCTTTCCAAGGACCCCCAAACTCTGCTCCGTGCACGTCAAATGCTCCTTTCCCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGTCCAACCCCCTACCCCTCTCCCTAACACCCCTCTTCTCAACAAGACTCAGCCTCTCCCCGAGGTGGGTGAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATCCTTGAGGTTTCCCACCCTTAACTGCTGTGTCCCCGGATGGAGCCAGAGAAATGTGGTGGGGGGGCCGGGG 1702
Query 1 ----------------------------------------------------------------ATGCCGGAGC 10
||||||||||
Sbjct 1703 CCAGAGTTTCAACATTGCCCCCCAGAAGGAGGAGCCAGAGATGGGGTCTGTCCAGGAAAATAGGATGCCGGAGC 1776
Query 11 CCAGGAGTCGTCAGCCTAGCAGTTGCCTGGCCTCCAGATGCCTCCCAGGGGAGCAGATCCTAGCATGGGCCCCA 84
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCAGGAGTCGTCAGCCTAGCAGTTGCCTGGCCTCCAGATGCCTCCC---------------------------- 1822
Query 85 GGGGTGAGGAAGGGCCTGGAACCAGAATTGTCTGGAACCCTGATCTGTACCAACTTTAGGGTCACCTTCCAGCC 158
|||||||||||||||||
Sbjct 1823 ---------------------------------------------------------AGGGTCACCTTCCAGCC 1839
Query 159 CTGTGGATGGCAGTGGAATCAGGACACTCCCTTGAACAGTGAATACGATTTTGCCCTGGTCAACATTGGACGAT 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 CTGTGGATGGCAGTGGAATCAGGACACTCCCTTGAACAGTGAATACGATTTTGCCCTGGTCAACATTGGACGAT 1913
Query 233 TAGAGGCTGTGAGCGGCTTGTCCCGAGTCCAGCTCCTCCGTCCAGGGTCCCTGCATAAATTTATCCCTGAGGAG 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 TAGAGGCTGTGAGCGGCTTGTCCCGAGTCCAGCTCCTCCGTCCAGGGTCCCTGCATAAATTTATCCCTGAGGAG 1987
Query 307 ATTCTGATTCATGGCCGAGACTTCCGGCTGCTCAGAGTTGGTTTTGAGGCTGGAGGCCTAGAGCCTCAGGCTTT 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1988 ATTCTGATTCATGGCCGAGACTTCCGGCTGCTCAGAGTTGGTTTTGAGGCTGGAGGCCTAGAGCCTCAGGCTTT 2061
Query 381 TCAGGTGACCATGGCCATTGTCCAAGCCAGAGCTCAGAGCAATCAAGCCCAACAGTATTCGGGGATAACCCTGA 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2062 TCAGGTGACCATGGCCATTGTCCAAGCCAGAGCTCAGAGCAATCAAGCCCAACAGTATTCGGGGATAACCCTGA 2135
Query 455 GCAAGGCTGGCCAGGGTTCTGGCTCCAGAAAACCACCAATTCCTCTCATGGAGACAGCGGAAGACTGGGAGACT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2136 GCAAGGCTGGCCAGGGTTCTGGCTCCAGAAAACCACCAATTCCTCTCATGGAGACAGCGGAAGACTGGGAGACT 2209
Query 529 GAGCGGAAGAAGCAGGCAGCCAGAGGCTGGAGGGTCAGCACGGTCAACGAGAGGTTCGACGTAGCCACCAGCCT 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2210 GAGCGGAAGAAGCAGGCAGCCAGAGGCTGGAGGGTCAGCACGGTCAACGAGAGGTTCGACGTAGCCACCAGCCT 2283
Query 603 CCCCCGTTACTTCTGGGTCCCTAACCGAATTCTGGACAGTGAGGTCAGGAGAGCATTTGGCCACTTTCATCAGG 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2284 CCCCCGTTACTTCTGGGTCCCTAACCGAATTCTGGACAGTGAGGTCAGGAGAGCATTTGGCCACTTTCATCAGG 2357
Query 677 GCCGTGGACCGGTCAGTGTGATGG--------TTAGGGTAATG---------GCTGTGGAT------------- 720
|||||||||||..| .|||..||| |..|||.|.|| ||||||||.
Sbjct 2358 GCCGTGGACCGCGC-TTGTCCTGGCATCACCCTGGGGGCAGTGATCTTCTCCGCTGTGGAGGCTTCTATACAGC 2430
Query 721 -------------------------------------------------------------------------- 720
Sbjct 2431 CAGTGACCCTAACAAGGAGGATATCAGAGCAGTGGAGTTGATGCTCCAGGCTGGGCATTCAGATGTTGTCCTGG 2504
Query 721 -------------------------------------------------------------------------- 720
Sbjct 2505 TAGACACTATGGATGAGCTGCCCAGCCTTGCAGATGTCCAACTTGCCCACCTGAGGCTGAGGGCCCTCTGCCTG 2578
Query 721 -------------------------------------------------------------------------- 720
Sbjct 2579 CCTGATTCATCTGTAGCTGAGGATAAATGGCTTTCAGCCCTGGAAGGAACACGATGGCTGGACTATGTCAGGGC 2652
Query 721 -------------------------------------------------------------------------- 720
Sbjct 2653 TTGTCTTCGAAAGGCCAGTGACATTTCAGTATTAGTGACATCCAGGGTTCGTTCTGTAATACTTCAAGCTGCTT 2726
Query 721 -------------------------------------------------------------------------- 720
Sbjct 2727 TCAGCCCCCGAAGCCCGAACACTGTTTGGCTTCCAATCACTAGTACAGCGAGAGTGGGTGGCAGCTGGACATCC 2800
Query 721 -------------------------------------------------------------------------- 720
Sbjct 2801 CTTCCTGACTCGGCTTGGGGGAACTGGGGCCAGTGAAGAGGCTCCGGTGTTTCTCCTCTTCCTTGATTGTGTCT 2874
Query 721 -------------------------------------------------------------------------- 720
Sbjct 2875 GGCAGCTCCTCCAGCAGTTTCCAGCTGATTTTGAATTCTCTGAGTTTTTCCTTCTTGCTCTTCATGACAGTGTC 2948
Query 721 -------------------------------------------------------------------------- 720
Sbjct 2949 AGGGTTCCTGACACCCTTACCTTCCTGAGAAATACCCCCTGGGAGCGCGGAAAGCAGAGCGGACAGTTAAACTC 3022
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3023 CTATACACAAGTCTACACCCCAGGATACTCCCAGCCTCCAGCTGGGAACTCTTTTAACCTGCAGCTGTCTGTCT 3096
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3097 GGGACTGGGATTTACGTTATAGCAATGCACAGATACTACAATTCCAGAATCCTGGCTATGACCCAGAACACTGT 3170
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3171 CCAGATTCCTGGCTCCCTAGACCACAGCCAAGCTTCATGGTTCCTGGACCCCCCAGTTCTGTGTGGCTCTTCTC 3244
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3245 TAGAGGAGCATTGACCCCCCTGAATCAGCTCTGTCCTTGGCGGGACAGTCCTTCCCTGCTGGCAGTCTCTTCTC 3318
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3319 GTTGGCTCCCTCGACCTGCTATCTCCTCTGAAAGCCTGGCTGACCAGGAATGGGGTCTCCCCTCACATTGGGGA 3392
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3393 GCTTGCCCTTTACCTCCAGGGCTGCTGCTGCCTGGGTATCTGGGACCCCAGATCAGGCTCTGGAGACGCTGCTA 3466
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3467 CCTGAGGGGAAGGCCTGAGGTCCAGATGGGCCTCTCAGCTCCCACAATCTCTGGCCTCCAGGATGAGCTATCCC 3540
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3541 ATCTTCAGGAGTTATTACGGAAATGGACACCAAGAATATCTCCTGAGGATCACTCCAAGAAAAGAGATCCACAT 3614
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3615 ACCATTCTCAATCCCACTGAAATTGCTGGCATTCTCAAAGGCAGGGCAGAGGGGGATCTGGGGTAGAGGAGGGT 3688
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3689 TCTGTCTAATCTTTTTTTTTTTTTTTTGTATCTGCACTTGCAGCCTCAGCTTTCACACTTCAGCCCTTAAGTTC 3762
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3763 ACTAAGAAGGTCTGAGTTTCTGCTGCAGATAGTGGTGTTAACTGCTCCAACTCTTGTCTTGCTTAGTTTCTACA 3836
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3837 AATATTTTTGCTTCTTGTCATTTGAAGGATTAAGAAACAAAAACAATCCAGAAATTGATCGGTTTTTTTAGGCC 3910
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3911 AATCCCATCCCTTCTGGATAACCAGATGTTAAATCATGAGATCAGAGATGCTGTTCATCAGTCCCAACAAGATG 3984
Query 721 -------------------------------------------------------------------------- 720
Sbjct 3985 GCCTAGAAATCGCATTCTCACCTCGCCTTGCTGCTGCTTTAATTCCAAGTTCTATTTCTTCCCTTATAGTTTTC 4058
Query 721 -------------------------------------------------------------------------- 720
Sbjct 4059 TATGGGAATGAGGCGGATACAGGAAACACCCTATCTCCTCTGTATTTTTGTAGTGGAATTTCTATTTAAGGGGC 4132
Query 721 -------------------------- 720
Sbjct 4133 TCATTAAAGCATAGTATTTATACACA 4158
