Nucleotide Global Alignment

Description

Query:
TRCN0000466041
Subject:
XR_001752591.1
Aligned Length:
3415
Identities:
1348
Gaps:
1983

Alignment

Query    1  --------------------ATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC  54
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC  74

Query   55  CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG  128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG  148

Query  129  CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA  202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA  222

Query  203  GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC  276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC  296

Query  277  CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG  350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG  370

Query  351  CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA  424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA  444

Query  425  ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG  498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG  518

Query  499  GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG  572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG  592

Query  573  AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG  646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG  666

Query  647  ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC  720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC  740

Query  721  ACCACCGTAGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA  794
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA  814

Query  795  CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA  868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA  888

Query  869  CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC  942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC  962

Query  943  CTCCTA--GAC----CTCAC----GCCCAC---------------CATCTTG-------GATT-----------  973
            ||||||  |||    || ||    ||||||               ||||.||       ||||           
Sbjct  963  CTCCTAGTGACTAGGCT-ACTTTTGCCCACTGTAAAAGGCACCGTCATCCTGGTATCAAGATTCTGGAGAGGCC  1035

Query  974  --------------------------------------------GGTTCTCGATCCCGTAC-------------  990
                                                        .|.|.||.||||.||.|             
Sbjct 1036  AGATTTGAAATCAAGTTTGTTTGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACAC  1109

Query  991  --CCCAGCT--ACG-CCA---------------TCTTT-------GGCTCGAAGACCA-----TCCACCTCACT  1032
              .||||||  ||| |||               |||||       ||...|||||  |     ||.|..||||.
Sbjct 1110  TGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTGTGGGAGGGAGAGAAGA--AGTGAGTCAAGATCACA  1181

Query 1033  GGCC-----GG-----------------TCCCTCCTG-------------------------------------  1047
            ||||     ||                 .|||..|||                                     
Sbjct 1182  GGCCTCAGAGGAAGCAAAGGGAGCCAACGCCCAGCTGAGGAAACTGAGATTCAAGGAGTTGGGAGACCTCACCC  1255

Query 1048  -CCGGCGC-TGGA--------GGCCGA------------GCCCCT-CTGGGCCACCGTCT-TTGGCAGCCAGAG  1097
             |.|.|.| ||||        |||.||            ||.||| |||||       || ||||.|.||||||
Sbjct 1256  ACAGTCACGTGGATCCTAACTGGCTGAGATGAGTTTTGGGCTCCTGCTGGG-------CTGTTGGGACCCAGAG  1322

Query 1098  --CCACCACGAGGTCACC----------------------------ATGTCCTACCCC----ATGCGCTCCGTG  1137
              |..|.||.||||||||                            ||.||.|.||||    .|||..||| ||
Sbjct 1323  GTCGGCGACAAGGTCACCCAGGTCTCAGGTCGGTCCCTGTACCTTTATCTCATCCCCCTCCTCTGCATTCC-TG  1395

Query 1138  CAGCACCGGCACTTCC-------GC-CTCGTGCACA-----------ACCTCAACTTCAAGATGCCCTTTCCCA  1192
            .|  |||    |||||       || |.|.|||.||           ||||||            |||||.|||
Sbjct 1396  AA--ACC----CTTCCCAGGACAGCTCCCCTGCCCACCCCGCCCTTGACCTCA------------CCTTTTCCA  1451

Query 1193  TCGACCAGGACTTCTA--------CGTCTCACCCA-------CCTTCCAGGA--------CCTCCTGAA-----  1238
            | ||  .|||| ||.|        ||..|||||||       ||  ||.|||        |||||||.|     
Sbjct 1452  T-GA--GGGAC-TCCACAGCATGGCGGGTCACCCAGCAGCGGCC--CCCGGACACCTCTCCCTCCTGGATGATG  1519

Query 1239  -CCGCACTACAGCTGGTCAGC-CCACGGGCTGGTACAAGGACCTCC-GTC---ATTACTACTAC----------  1296
             ||.|.||    |||    || ||| ||.||..|||    .||||| |.|   |.|||| ||||          
Sbjct 1520  TCCCCTCT----CTG----GCTCCA-GGCCTCATAC----TCCTCCTGGCTCAAGTACT-CTACAGGTGACATT  1579

Query 1297  ---CGGGCGC------------GCTG---GGAGCTCTACGACCGGAG-----------------------CCGG  1329
               |||| ||            ||||   ||.|.|||..|   ||||                       |||.
Sbjct 1580  GGACGGG-GCCATCATAGACCAGCTGTGTGGGGGTCTGGG---GGAGTCCCATGGTAAACACCCCTGTCCCCGT  1649

Query 1330  GACCCC------CAC---GAGA-----------------CC------CAGAACCTGGC------CACCGACCCG  1365
            ||.|||      |||   ||||                 ||      || ||||||.|      |||   ||||
Sbjct 1650  GAACCCTGCCAGCACTGGGAGAAGCTCTTCTTAGGATGTCCACTTTACA-AACCTGACCCTGCACAC---CCCG  1719

Query 1366  CGCTTTGCTCAGC-------TTCTGGAGATGCT-TCGGGAC-CAGCTGGCCAAGTG----GCAGTGGGA-----  1421
            |.||.|||.|.||       |.|||.|    || ||.|||| ||||.|||    ||    |||.|||.|     
Sbjct 1720  CTCTGTGCCCTGCACCTCCATCCTGAA----CTATCTGGACACAGCAGGC----TGGAGTGCAATGGCACCATC  1785

Query 1422  --GACCCAC----------GACCCCTGGGT-------------GTGC----GCC-CCCGACG------------  1453
              |.|.|||          |.|.||.||||             .|||    ||| ||||| |            
Sbjct 1786  TCGGCTCACTGCCACCTCTGCCTCCCGGGTTCAGGCGATTCTCCTGCCTCAGCCTCCCGA-GTATCTGGGATTA  1858

Query 1454  ----GCGTCCTG---------GAG----GAGAAGCTCT-------CTCCCCAGTG----CCA-GCCCCTCCACA  1498
                ||.|||||         .||    |||...||||       |.||||||||    ||| ||||||||   
Sbjct 1859  CAGTGCCTCCTGCCACCCTGCCAGCACCGAGCCCCTCTTCCAGCCCACCCCAGTGGGGTCCAGGCCCCTCC---  1929

Query 1499  ATGAGCTG------------------------------------------------------------------  1506
                 |||                                                                  
Sbjct 1930  -----CTGGAGCCTCACCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTG  1998

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 1999  CTGAGCCCTGCAGAGACCAGCAGAGGCCCTGACCCAGCTGCCTCCTGCCAGGAGGAGGAAGCCGAGGCAGGCTG  2072

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2073  GGTGCCATTTCCCTGTGGGCCTCTCTGGGGACGCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGA  2146

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2147  TGGTGCCGTGCGCGGCAGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTC  2220

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2221  CTCCAGGACTGCCTTGAACAAGGGCTCTGAGGCTTCGTAATCAACCTGAGGGCAAGTCGAGAAGGTCAGTCTCT  2294

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2295  TTCCCCCGGGACTCTGAATCCAGCCAGAAGACAGAAGGCGCTGAGGGCACTGAGGCGAGGCGCGGGCCAGCCCT  2368

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2369  GCCGTAGGACCACTGCCTGCACGCCTTGGTCAAAACAAAGCCACACACCAGAGCCTCTGTGGGGCCTTCACACC  2442

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2443  TCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGTCAACTGCCAACCCTTCCCCAGTCGAGATCGGGGGT  2516

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2517  TCTTTGTGATAAGCACTTTCCTGTCTTGAAAAAGAAAAGAAAAGAAAAGAAAGAACCTCGGTTCTAGAACATTC  2590

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2591  AAGAGCATTCTAGATAGAGGTTTCTTAGCCTTGGGATCATTCTGTGCTGCTGCGGGCTATACCGGGCCCTACAG  2664

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2665  GATGCTGAGTGGCATCCCTGGCCTTCACCTACCCGATGCCCTGGCTCTCCACCCACAGCCTTCCCCACTGTGAA  2738

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2739  GGCCCACCCCCCAGGGCTTCCACCATCCACTTCATTTCTTCTCAATATTGTTCTAAGCTTAGGAGAGTAGATAT  2812

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2813  TTTTACAATAAAAATTAAGATGTGTTTTAACACCATTAGAATCTAATTGGCCCCCTTAGGATATCGGGACTATC  2886

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2887  TCCCTGAACATCGTCAAGGGGCTCTGTTGCTTGAACTACCTCAGAGCTGATAATTGGGAACCTTAAGAGCAGGG  2960

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 2961  TTCCCCAACCCCTGGGCCACATACTGGTACTGGTCCATGGTCCATCAGGACCCGGGTCACACAGCAGGAGGGGC  3034

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 3035  GTGGTGGGCAAGTGAGCATTACGGCCTCAGCTCCACCTCCTGTCAGCTCAGCACAGCAGTAGATTCTCAGAGGA  3108

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 3109  GCATGAGCCCTATCGTGAACTGTGCAAGTGAGGGATCTAGGTTTCACGCTCCTTATGAGAATCTAATTCCTGAT  3182

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 3183  GATCTGTTACCGTCTCCCATCACCCCCAGATGGGACCGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCACTG  3256

Query 1507  --------------------------------------------------------------------------  1506
                                                                                      
Sbjct 3257  ATTCTGAATTATGGTTCAGTGTATGATTCTTTCATTACATATTACAGTGTAATAATAATAGAAATAAAGTGTAC  3330

Query 1507  -----------  1506
                       
Sbjct 3331  AATCAATGTAA  3341

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