Nucleotide Global Alignment
Description
- Query:
- TRCN0000466041
- Subject:
- XR_001752591.1
- Aligned Length:
- 3415
- Identities:
- 1348
- Gaps:
- 1983
Alignment
Query 1 --------------------ATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC 74
Query 55 CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG 148
Query 129 CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA 222
Query 203 GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC 296
Query 277 CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG 370
Query 351 CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA 444
Query 425 ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG 518
Query 499 GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG 592
Query 573 AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG 666
Query 647 ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC 740
Query 721 ACCACCGTAGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA 794
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA 814
Query 795 CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA 888
Query 869 CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC 962
Query 943 CTCCTA--GAC----CTCAC----GCCCAC---------------CATCTTG-------GATT----------- 973
|||||| ||| || || |||||| ||||.|| ||||
Sbjct 963 CTCCTAGTGACTAGGCT-ACTTTTGCCCACTGTAAAAGGCACCGTCATCCTGGTATCAAGATTCTGGAGAGGCC 1035
Query 974 --------------------------------------------GGTTCTCGATCCCGTAC------------- 990
.|.|.||.||||.||.|
Sbjct 1036 AGATTTGAAATCAAGTTTGTTTGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACAC 1109
Query 991 --CCCAGCT--ACG-CCA---------------TCTTT-------GGCTCGAAGACCA-----TCCACCTCACT 1032
.|||||| ||| ||| ||||| ||...||||| | ||.|..||||.
Sbjct 1110 TGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTGTGGGAGGGAGAGAAGA--AGTGAGTCAAGATCACA 1181
Query 1033 GGCC-----GG-----------------TCCCTCCTG------------------------------------- 1047
|||| || .|||..|||
Sbjct 1182 GGCCTCAGAGGAAGCAAAGGGAGCCAACGCCCAGCTGAGGAAACTGAGATTCAAGGAGTTGGGAGACCTCACCC 1255
Query 1048 -CCGGCGC-TGGA--------GGCCGA------------GCCCCT-CTGGGCCACCGTCT-TTGGCAGCCAGAG 1097
|.|.|.| |||| |||.|| ||.||| ||||| || ||||.|.||||||
Sbjct 1256 ACAGTCACGTGGATCCTAACTGGCTGAGATGAGTTTTGGGCTCCTGCTGGG-------CTGTTGGGACCCAGAG 1322
Query 1098 --CCACCACGAGGTCACC----------------------------ATGTCCTACCCC----ATGCGCTCCGTG 1137
|..|.||.|||||||| ||.||.|.|||| .|||..||| ||
Sbjct 1323 GTCGGCGACAAGGTCACCCAGGTCTCAGGTCGGTCCCTGTACCTTTATCTCATCCCCCTCCTCTGCATTCC-TG 1395
Query 1138 CAGCACCGGCACTTCC-------GC-CTCGTGCACA-----------ACCTCAACTTCAAGATGCCCTTTCCCA 1192
.| ||| ||||| || |.|.|||.|| |||||| |||||.|||
Sbjct 1396 AA--ACC----CTTCCCAGGACAGCTCCCCTGCCCACCCCGCCCTTGACCTCA------------CCTTTTCCA 1451
Query 1193 TCGACCAGGACTTCTA--------CGTCTCACCCA-------CCTTCCAGGA--------CCTCCTGAA----- 1238
| || .|||| ||.| ||..||||||| || ||.||| |||||||.|
Sbjct 1452 T-GA--GGGAC-TCCACAGCATGGCGGGTCACCCAGCAGCGGCC--CCCGGACACCTCTCCCTCCTGGATGATG 1519
Query 1239 -CCGCACTACAGCTGGTCAGC-CCACGGGCTGGTACAAGGACCTCC-GTC---ATTACTACTAC---------- 1296
||.|.|| ||| || ||| ||.||..||| .||||| |.| |.|||| ||||
Sbjct 1520 TCCCCTCT----CTG----GCTCCA-GGCCTCATAC----TCCTCCTGGCTCAAGTACT-CTACAGGTGACATT 1579
Query 1297 ---CGGGCGC------------GCTG---GGAGCTCTACGACCGGAG-----------------------CCGG 1329
|||| || |||| ||.|.|||..| |||| |||.
Sbjct 1580 GGACGGG-GCCATCATAGACCAGCTGTGTGGGGGTCTGGG---GGAGTCCCATGGTAAACACCCCTGTCCCCGT 1649
Query 1330 GACCCC------CAC---GAGA-----------------CC------CAGAACCTGGC------CACCGACCCG 1365
||.||| ||| |||| || || ||||||.| ||| ||||
Sbjct 1650 GAACCCTGCCAGCACTGGGAGAAGCTCTTCTTAGGATGTCCACTTTACA-AACCTGACCCTGCACAC---CCCG 1719
Query 1366 CGCTTTGCTCAGC-------TTCTGGAGATGCT-TCGGGAC-CAGCTGGCCAAGTG----GCAGTGGGA----- 1421
|.||.|||.|.|| |.|||.| || ||.|||| ||||.||| || |||.|||.|
Sbjct 1720 CTCTGTGCCCTGCACCTCCATCCTGAA----CTATCTGGACACAGCAGGC----TGGAGTGCAATGGCACCATC 1785
Query 1422 --GACCCAC----------GACCCCTGGGT-------------GTGC----GCC-CCCGACG------------ 1453
|.|.||| |.|.||.|||| .||| ||| ||||| |
Sbjct 1786 TCGGCTCACTGCCACCTCTGCCTCCCGGGTTCAGGCGATTCTCCTGCCTCAGCCTCCCGA-GTATCTGGGATTA 1858
Query 1454 ----GCGTCCTG---------GAG----GAGAAGCTCT-------CTCCCCAGTG----CCA-GCCCCTCCACA 1498
||.||||| .|| |||...|||| |.|||||||| ||| ||||||||
Sbjct 1859 CAGTGCCTCCTGCCACCCTGCCAGCACCGAGCCCCTCTTCCAGCCCACCCCAGTGGGGTCCAGGCCCCTCC--- 1929
Query 1499 ATGAGCTG------------------------------------------------------------------ 1506
|||
Sbjct 1930 -----CTGGAGCCTCACCTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTG 1998
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 1999 CTGAGCCCTGCAGAGACCAGCAGAGGCCCTGACCCAGCTGCCTCCTGCCAGGAGGAGGAAGCCGAGGCAGGCTG 2072
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2073 GGTGCCATTTCCCTGTGGGCCTCTCTGGGGACGCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGA 2146
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2147 TGGTGCCGTGCGCGGCAGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCCCACGGCCTCCTCCAGGGTCGTGTC 2220
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2221 CTCCAGGACTGCCTTGAACAAGGGCTCTGAGGCTTCGTAATCAACCTGAGGGCAAGTCGAGAAGGTCAGTCTCT 2294
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2295 TTCCCCCGGGACTCTGAATCCAGCCAGAAGACAGAAGGCGCTGAGGGCACTGAGGCGAGGCGCGGGCCAGCCCT 2368
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2369 GCCGTAGGACCACTGCCTGCACGCCTTGGTCAAAACAAAGCCACACACCAGAGCCTCTGTGGGGCCTTCACACC 2442
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2443 TCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGTCAACTGCCAACCCTTCCCCAGTCGAGATCGGGGGT 2516
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2517 TCTTTGTGATAAGCACTTTCCTGTCTTGAAAAAGAAAAGAAAAGAAAAGAAAGAACCTCGGTTCTAGAACATTC 2590
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2591 AAGAGCATTCTAGATAGAGGTTTCTTAGCCTTGGGATCATTCTGTGCTGCTGCGGGCTATACCGGGCCCTACAG 2664
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2665 GATGCTGAGTGGCATCCCTGGCCTTCACCTACCCGATGCCCTGGCTCTCCACCCACAGCCTTCCCCACTGTGAA 2738
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2739 GGCCCACCCCCCAGGGCTTCCACCATCCACTTCATTTCTTCTCAATATTGTTCTAAGCTTAGGAGAGTAGATAT 2812
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2813 TTTTACAATAAAAATTAAGATGTGTTTTAACACCATTAGAATCTAATTGGCCCCCTTAGGATATCGGGACTATC 2886
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2887 TCCCTGAACATCGTCAAGGGGCTCTGTTGCTTGAACTACCTCAGAGCTGATAATTGGGAACCTTAAGAGCAGGG 2960
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2961 TTCCCCAACCCCTGGGCCACATACTGGTACTGGTCCATGGTCCATCAGGACCCGGGTCACACAGCAGGAGGGGC 3034
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3035 GTGGTGGGCAAGTGAGCATTACGGCCTCAGCTCCACCTCCTGTCAGCTCAGCACAGCAGTAGATTCTCAGAGGA 3108
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3109 GCATGAGCCCTATCGTGAACTGTGCAAGTGAGGGATCTAGGTTTCACGCTCCTTATGAGAATCTAATTCCTGAT 3182
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3183 GATCTGTTACCGTCTCCCATCACCCCCAGATGGGACCGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCACTG 3256
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3257 ATTCTGAATTATGGTTCAGTGTATGATTCTTTCATTACATATTACAGTGTAATAATAATAGAAATAAAGTGTAC 3330
Query 1507 ----------- 1506
Sbjct 3331 AATCAATGTAA 3341
