Nucleotide Global Alignment

Description

• Query: TRCN0000466117
• Subject: XM_011518521.2
• Aligned Length: 1252
• Identities: 1044
• Gaps: 194

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTACTGGAAGCATGAGAACGCCGCCCCGGCGTTGCCCGAGGGCTGCCGGCTGCCGGCCGAGGGCGGCCCCGC  74

Query    1  -------------ATGGCCCAGCCAGGGTCCGGCTGCAAAGCGACCACCCGCTGTCTTGAAGGGACCGCGCCGC  61
                         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CACCGACCAGGTGATGGCCCAGCCAGGGTCCGGCTGCAAAGCGACCACCCGCTGTCTTGAAGGGACCGCGCCGC  148

Query   62  CCGCCATGGCTCAGTCTGACGCCGAGGCCCTGGCAGGAGCTCTGGACAAGGACGAGGGTCAGGCCTCCCCATGT  135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCGCCATGGCTCAGTCTGACGCCGAGGCCCTGGCAGGAGCTCTGGACAAGGACGAGGGTCAGGCCTCCCCATGT  222

Query  136  ACGCCCAGCACGCCATCTGTCTGCTCACCGCCCTCTGCCGCCTCCTCCGTGCCGTCTGCAGGCAAGAACATCTG  209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ACGCCCAGCACGCCATCTGTCTGCTCACCGCCCTCTGCCGCCTCCTCCGTGCCGTCTGCAGGCAAGAACATCTG  296

Query  210  CTCCAGCTGCGGCCTCGAGATCCTGGACCGATATCTGCTCAAGGTCAACAACCTCATCTGGCACGTGCGGTGCC  283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTCCAGCTGCGGCCTCGAGATCCTGGACCGATATCTGCTCAAGGTCAACAACCTCATCTGGCACGTGCGGTGCC  370

Query  284  TCGAGTGCTCCGTGTGTCGCACGTCGCTGAGGCAGCAGAACAGCTGCTACATCAAGAACAAGGAGATCTTCTGC  357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCGAGTGCTCCGTGTGTCGCACGTCGCTGAGGCAGCAGAACAGCTGCTACATCAAGAACAAGGAGATCTTCTGC  444

Query  358  AAGATGGACTACTTCAGCCGATTCGGGACCAAGTGTGCCCGGTGCGGCCGACAGATCTACGCCAGCGACTGGGT  431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAGATGGACTACTTCAGCCGATTCGGGACCAAGTGTGCCCGGTGCGGCCGACAGATCTACGCCAGCGACTGGGT  518

Query  432  GCGGAGAGCTCGCGGCAACGCCTACCACCTGGCCTGCTTCGCCTGCTTCTCGTGCAAGCGCCAGCTGTCCACTG  505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCGGAGAGCTCGCGGCAACGCCTACCACCTGGCCTGCTTCGCCTGCTTCTCGTGCAAGCGCCAGCTGTCCACTG  592

Query  506  GTGAGGAGTTCGGCCTGGTCGAGGAGAAGGTGCTCTGCCGCATCCACTACGACACCATGATTGAGAACCTCAAG  579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGAGGAGTTCGGCCTGGTCGAGGAGAAGGTGCTCTGCCGCATCCACTACGACACCATGATTGAGAACCTCAAG  666

Query  580  AGGGCCGCCGAGAACGGGAACGGCCTCACGTTGGAGGGGGCAGTGCCCTCGGAACAGGACAGTCAACCCAAGCC  653
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGGGCCGCCGAGAACGGGAACGGCCTCACGTTGGAGGGGGCAGTGCCCTCGGAACAGGACAGTCAACCCAAGCC  740

Query  654  GGCCAAGCGCGCGCGGACGTCCTTCACCGCGGAACAGCTGCAGGTTATGCAGGCGCAGTTCGCGCAGGACAACA  727
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGCCAAGCGCGCGCGGACGTCCTTCACCGCGGAACAGCTGCAGGTTATGCAGGCGCAGTTCGCGCAGGACAACA  814

Query  728  ACCCCGACGCTCAGACGCTGCAGAAGCTGGCGGACATGACGGGCCTCAGCCGGAGAGTCATCCAGGTGTGGTTT  801
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACCCCGACGCTCAGACGCTGCAGAAGCTGGCGGACATGACGGGCCTCAGCCGGAGAGTCATCCAGGTGTGGTTT  888

Query  802  CAAAACTGCCGGGCGCGTCATAAAAAGCACACGCCGCAACACCCAGTGCCGCCCTCGGGGGCGCCCCCGTCCCG  875
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CAAAACTGCCGGGCGCGTCATAAAAAGCACACGCCGCAACACCCAGTGCCGCCCTCGGGGGCGCCCCCGTCCCG  962

Query  876  CCTTCCCTCCGCCCTGTCCGACGACATCCACTACACCCCGTTCAGCAGCCCCGAGCGGGCGCGCATGGTCACCC  949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCTTCCCTCCGCCCTGTCCGACGACATCCACTACACCCCGTTCAGCAGCCCCGAGCGGGCGCGCATGGTCACCC  1036

Query  950  TGCACGGCTACATTGAGA---------GTCAGGTACAGTGCGGGCAGG----------TGCACTGCCGGC----  1000
            ||||||||||||||||||         |||        |||.||||||          ||  .|||.|||    
Sbjct 1037  TGCACGGCTACATTGAGACAAATGCGCGTC--------TGCTGGCAGGGATGTGTGATTG--GTGCGGGCATTT  1100

Query 1001  ----TGCC--TTACACCGCA----CCCCCCGTCCACCTCAAAGCC-----------------------------  1035
                ||.|  |||||.||.|    |||    ||||   |||||||                             
Sbjct 1101  GATTTGGCAGTTACAGCGTATTATCCC----TCCA---CAAAGCCTTCATTACGGTGCTGCTAACAACACCGCA  1167

Query 1036  GAT-----ATGGATG---------GGCCGCTCTCCAACCGGGGTGAGAAGGTCATCCTTTTTCAGTAC  1089
            |||     |||||||         |.|.|| |||||     |||||     |.||....||||.|   
Sbjct 1168  GATAAAGCATGGATGTCCCCGCGTGCCAGC-CTCCA-----GGTGA-----TTATAACATTTCGG---  1221