Nucleotide Global Alignment
Description
- Query:
- TRCN0000466119
- Subject:
- XR_934333.2
- Aligned Length:
- 3688
- Identities:
- 294
- Gaps:
- 3382
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAGGAGTAGCTCTGTGTCAAGCTTAGGGGACTGGAAGAGGCCGCAACCTTCCGCCTGCTGGAGGGTGGAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGATGGAGCCTGGAGCCTAGGTCACTACCTTGCTGTGGTTGGTGGTGGCGATAGAGCAGTAGGAGAGCGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGCAGGAGGACTAGAAGGAAGAGGTACTGCCACATGCTGGAGGCTGGAACCTGTGCCACCATGGCTCGCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGTGGTTGGTGGTAACGTCGGAGACTGCAGCTCAGCCACGGTGGTAGACATGTGATGGGGTAGCTTCCAAGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGGGATCGTTTTCCTCTTCTCAGACTCCAGACTCTAGAAGGCGATTTTCTCTGCTCGAGCTGGATTGCACGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTCCAAGCCAGGCTGAAGGAGGAGAAGGAGTTGCCGCCTGTGGTACGGTCGAGCAGATGACGTGGCTCTGCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTGCCTCATGCAGTTGGTGTTGGAGATGGAGACCACAGCTCGACTGGAGCGGTGGTTTCCTAGAAACATGATT 518
Query 1 ----------------------------------------------ATGTCAAGTTCAGGTTACCCTCCCAACC 28
||||||||||||||||||||||||||||
Sbjct 519 GTTTATTGGCGTTGATCTCAGTCTGGTGAGGACTTCTTTACTGATAATGTCAAGTTCAGGTTACCCTCCCAACC 592
Query 29 AAGGAGCATTCAGCACAGAACAAAGTCATTATCCTCCTCACTCTGTAAAGTATACGTTTCCCAGCACCCACCAC 102
|||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 593 AAGGAGCATTCAGCACAGAACAAAGTCGTTATCCTCCTCACTCTGTAAAGTATACGTTTCCCAGCACCCGCCAC 666
Query 103 CAGCAGGATCCAGCATTTGGAGGCAAACATGAAGCTCCATCCTCTCCAATTCTGGGGCAACCGTGTGGAGATGA 176
||||||||||||.||||||||||||||||||||||||||||||||||||||..|.|||||||||||||||||||
Sbjct 667 CAGCAGGATCCAACATTTGGAGGCAAACATGAAGCTCCATCCTCTCCAATTTCGAGGCAACCGTGTGGAGATGA 740
Query 177 TCAAAATGCTTCACCTTCAAAACTTTCAAAGGAAGAGTTAATAGAGTGTATGGATCGTGTAGATCGAGAAATTG 250
|||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||.||||||||||||
Sbjct 741 TCAAAATGCTTCACCTTCAAAACTTTCAAAGGAAGAGTTAATACAGAGTATGGATCGTATAAATCGAGAAATTG 814
Query 251 CAAAAGTAGAACAGCAGATCCTTAAACTGAAAAAGAAACAAGTAAAAGTCTTCG----------TC-------- 306
|||||||||||||||||||||||||||||||.||||||||||||||||||||.| ||
Sbjct 815 CAAAAGTAGAACAGCAGATCCTTAAACTGAAGAAGAAACAAGTAAAAGTCTTTGCTTATAATATTCTAAGAATG 888
Query 307 -------------------------------------------------------------------------- 306
Sbjct 889 TGTGTTTTTCTCCCTACAGAAGATATTTTTGAGTTTTCCATATTATGAAACTGTACATAAAAGGAATCATGCCT 962
Query 307 -------------------------------------------------------------------------- 306
Sbjct 963 TATATATTCTGGCTTGCTGTTTTTTGCTGCTATTGTGGTTTTCTTTCATTCATTCATTTTCCTTGCTGCACTGT 1036
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1037 CTGATCATATGATTGTAGAGAGTGAAATTTGTCCATTCTATTTTTGATTTTTTTTTCTATTCCATACACTGGTG 1110
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1111 CTGGTTTTTGGTTCACATGTAGAGATTTTCTAGGGCATGTGCCCAGGAATGGCAGTGCTTGGCCCAAGATTATG 1184
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1185 CACAGTGAACTATTTAATAGATGACACCAAATTTGCTAAGAAGTAACACCATTTTACATTCCCACTGGCAACTT 1258
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1259 ACGTGGGTACTGGTTTGTGCACATTCTTGCCTTTACTTGATATCATTTTTTCATTTGGATATGAAATAGTCTTC 1332
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1333 TCTGTGGTTTGGAAGGAGGCTGAGCTTATTTTCATTTGTTTATGGGTTATTTGGGTTCCTTATGTGCATTGTTC 1406
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1407 ATGTCTTTTGTCTATAGTCTCCTATTTTGTCATTGAAATTTTTAGGATTCCCTGAAGTCCCTTGTCAGGTATGT 1480
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1481 GTATAGAAGATTTGCCTAGTTTGTGGCCTGTCACTTCACTTTTAGCCCAGTATCCACTCTAAGTGTACACTAAG 1554
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1555 TGCATTTTTTTTTCCACATTTCGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCAC 1628
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1629 TGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCAACAGCCTCCTGAGTATCTGGGACTATAGGTGCTAT 1702
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1703 AAGTGCTTTTAATGTATTCATAAAGTTGTACAGCTATCACCACTCTCTAACTCTAGAAGATTTTTATCGTTTCA 1776
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1777 AAAAGAAACTCCATACTTACTAGCAGTTACTCCCCATTTCCCCCTTTCCCCAGCCCCTGGCAACCACTAGACTA 1850
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1851 TTCTCTGTCTCTATGGACTAGCATGTGCCAAATATCAGAAAAAACAGAATCATATGTGACCTTTGGTGTTTGGC 1924
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1925 TTCATTTGTTTAGCATGTTGTCCTGATTCATCCATGTCGTATCTTGTCTCAGCACCTCATTACTTTATATGCCT 1998
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1999 GAATCCCATTGCGTGAGTATACTATGTTTTGTTTATCCATTCATTAGTTCATGGATATTGGAGTTGTGTTCATT 2072
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2073 TTTTGACTATGATTAATAATGTACTGTGATGAGATTCATGTACTCGTTTTTGTGAGGACGTATTTTTACAATTT 2146
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2147 TCTTTATATGTCTAGGAGTGGGCATATGGTAAATCTATGTTTAAATTTTTTGAAAAACTTCAAAACTGTTTTCC 2220
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2221 AAAGTCTCTGTACCATTTTATATTCTTACCAGCAGTGTATGGAGGTTCCATTTTTTCCTACCTCCTTGCCAACA 2294
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2295 TCTGTTATTTTCCTTTTTTTTAAAAAAAATAGCTATTCTTGTAGATGTGAAGTGGTATCTAGTTGTAGTTTTCA 2368
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2369 TTTGCATATCCTTAATGACTAATGATGTTGAGCATCTTTTCATGTGCTGATTGGCCATTTGTATATCTTTTTAG 2442
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2443 AGAAATGTTCATTTAGATTGTTTGCTCATTTAATTGGGTTGTCTTTTTGTTACTCTAAGAATTCTTTATATATT 2516
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2517 CTGGACATTAGTTCTTCATCAGATGTATGACTTAATAGGTATTTTCTCTCATTCTGTGGGTTCTTTTCACTTTC 2590
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2591 CTGATAGTATCCTTTGATGTACAAAGTTTTGAATTTTGTTGAAGTCCAGTTTGTTTTTTCCTTTTGTCACTCTT 2664
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2665 GCATTTGGTGTTGTATCTAAGACCCATTGCCTAATTCACGGTCACAGATTTATACCTATGTTTTCTTCTACAAA 2738
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2739 TTTTATAGTTTTACCCCTTATATTTGGGTCTTTGATCCTGATAGTGTTTTTCTGGTGAACAGAATTTGTTTAGG 2812
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2813 TTTTATATGAAAACCCACTGGGGTTATTAAGGTAGTTTTACTGTATTATTTGTAGAAGTTTTATAGTTTTGCTT 2886
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2887 CTCATCTTATTCTTAATCCACTGGAAACTACATATTGTATAGTCAGTGTTCATTTATATTTACTCAGATATTTG 2960
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2961 TCTTCTTAAGTGCTCACCATTTCTTCTCACAACTTAAGTCTTTCATCTAGGGGAACACTCTTCTACTGAAGAAC 3034
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3035 ATCTCTTAGAATTTCCTTTAGTGAAGGTCTCTTAGTTAGCAAAGTCAGTATTTGTTTGGTTTTTATGACTTAAA 3108
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3109 TATTGTCTTATATTTGGGCTGTTTATTAAAAGATATATTAATTTCATATGTGATTATTTTTTCTTAGTACATTG 3182
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3183 TCTTCTTGCTTCCATTTTTAAGACATTAGCTCTTGGTCTAAGTCCATATTCTTTCATGGATAAAGTGAATTTTC 3256
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3257 TCTCTGCTTATTTTCAATATATTCTTTTCTTCAGGGTTCCGTTATTTTTATGATGATACATTTAGGTGGTTTTT 3330
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3331 TTTTTCCCTTTTAAATCTGTCCAACTTGAGCTTCCTGAATATGAAGGGTGGAGTTTTTCATCACTTTGGGGAAA 3404
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3405 TTCCAAGCCATTATCTTTTTTACAAAACCTTTCTAACAGTTTATTGTTCTACTTATGAAATCCTGTTAGTTGTA 3478
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3479 ATATCACTCTTGTCTTCCATGTCTCTTGTTTGTTTCTTATTTTTTACTTCTTTGGGCTTCCTTCTGAGCAATTT 3552
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3553 CTTCAGCCTGTCTTCCAGTTTGCATTTTCCTTTTCAATTATATGTAATCTGCTGTCAAATCTGTCTTCAATTTC 3626
Query 307 -------------------------------------------------------------- 306
Sbjct 3627 AACAATTATGTTTTTATTTCTGGAATTTCTGTTTGGCTCCTTCTCAAATCTGCCTGGTCATT 3688
