Nucleotide Global Alignment
Description
- Query:
- TRCN0000466119
- Subject:
- XR_934336.2
- Aligned Length:
- 3651
- Identities:
- 294
- Gaps:
- 3345
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGGAGGAGTAGCTCTGTGTCAAGCTTAGGGGACTGGAAGAGGCCGCAACCTTCCGCCTGCTGGAGGGTGGAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGGATGGAGCCTGGAGCCTAGGTCACTACCTTGCTGTGGTTGGTGGTGGCGATAGAGCAGTAGGAGAGCGGTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGCAGGAGGACTAGAAGGAAGAGGTACTGCCACATGCTGGAGGCTGGAACCTGTGCCACCATGGCTCGCCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGTGGTTGGTGGTAACGTCGGAGACTGCAGCTCAGCCACGGTGGTAGACATGTGATGGGACTCCAGACTCTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGGCGATTTTCTCTGCTCGAGCTGGATTGCACGCTGCTCCAAGCCAGGCTGAAGGAGGAGAAGGAGTTGCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTGTGGTACGGTCGAGCAGATGACGTGGCTCTGCAGCTTGCCTCATGCAGTTGGTGTTGGAGATGGAGACCAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCTCGACTGGAGCGGTGGTTTCCTAGAAACATGATTGTTTATTGGCGTTGATCTCAGTCTGGTGAGGACTTCT 518
Query 1 ---------ATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCATTCAGCACAGAACAAAGTCATTATCCTCC 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 519 TTACTGATAATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCATTCAGCACAGAACAAAGTCGTTATCCTCC 592
Query 66 TCACTCTGTAAAGTATACGTTTCCCAGCACCCACCACCAGCAGGATCCAGCATTTGGAGGCAAACATGAAGCTC 139
||||||||||||||||||||||||||||||||.||||||||||||||||.||||||||||||||||||||||||
Sbjct 593 TCACTCTGTAAAGTATACGTTTCCCAGCACCCGCCACCAGCAGGATCCAACATTTGGAGGCAAACATGAAGCTC 666
Query 140 CATCCTCTCCAATTCTGGGGCAACCGTGTGGAGATGATCAAAATGCTTCACCTTCAAAACTTTCAAAGGAAGAG 213
||||||||||||||..|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CATCCTCTCCAATTTCGAGGCAACCGTGTGGAGATGATCAAAATGCTTCACCTTCAAAACTTTCAAAGGAAGAG 740
Query 214 TTAATAGAGTGTATGGATCGTGTAGATCGAGAAATTGCAAAAGTAGAACAGCAGATCCTTAAACTGAAAAAGAA 287
||||||.||.|||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 741 TTAATACAGAGTATGGATCGTATAAATCGAGAAATTGCAAAAGTAGAACAGCAGATCCTTAAACTGAAGAAGAA 814
Query 288 ACAAGTAAAAGTCTTCG----------TC--------------------------------------------- 306
|||||||||||||||.| ||
Sbjct 815 ACAAGTAAAAGTCTTTGCTTATAATATTCTAAGAATGTGTGTTTTTCTCCCTACAGAAGATATTTTTGAGTTTT 888
Query 307 -------------------------------------------------------------------------- 306
Sbjct 889 CCATATTATGAAACTGTACATAAAAGGAATCATGCCTTATATATTCTGGCTTGCTGTTTTTTGCTGCTATTGTG 962
Query 307 -------------------------------------------------------------------------- 306
Sbjct 963 GTTTTCTTTCATTCATTCATTTTCCTTGCTGCACTGTCTGATCATATGATTGTAGAGAGTGAAATTTGTCCATT 1036
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1037 CTATTTTTGATTTTTTTTTCTATTCCATACACTGGTGCTGGTTTTTGGTTCACATGTAGAGATTTTCTAGGGCA 1110
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1111 TGTGCCCAGGAATGGCAGTGCTTGGCCCAAGATTATGCACAGTGAACTATTTAATAGATGACACCAAATTTGCT 1184
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1185 AAGAAGTAACACCATTTTACATTCCCACTGGCAACTTACGTGGGTACTGGTTTGTGCACATTCTTGCCTTTACT 1258
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1259 TGATATCATTTTTTCATTTGGATATGAAATAGTCTTCTCTGTGGTTTGGAAGGAGGCTGAGCTTATTTTCATTT 1332
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1333 GTTTATGGGTTATTTGGGTTCCTTATGTGCATTGTTCATGTCTTTTGTCTATAGTCTCCTATTTTGTCATTGAA 1406
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1407 ATTTTTAGGATTCCCTGAAGTCCCTTGTCAGGTATGTGTATAGAAGATTTGCCTAGTTTGTGGCCTGTCACTTC 1480
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1481 ACTTTTAGCCCAGTATCCACTCTAAGTGTACACTAAGTGCATTTTTTTTTCCACATTTCGAGTCTCACTCTGTC 1554
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1555 ACCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTG 1628
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1629 CAACAGCCTCCTGAGTATCTGGGACTATAGGTGCTATAAGTGCTTTTAATGTATTCATAAAGTTGTACAGCTAT 1702
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1703 CACCACTCTCTAACTCTAGAAGATTTTTATCGTTTCAAAAAGAAACTCCATACTTACTAGCAGTTACTCCCCAT 1776
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1777 TTCCCCCTTTCCCCAGCCCCTGGCAACCACTAGACTATTCTCTGTCTCTATGGACTAGCATGTGCCAAATATCA 1850
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1851 GAAAAAACAGAATCATATGTGACCTTTGGTGTTTGGCTTCATTTGTTTAGCATGTTGTCCTGATTCATCCATGT 1924
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1925 CGTATCTTGTCTCAGCACCTCATTACTTTATATGCCTGAATCCCATTGCGTGAGTATACTATGTTTTGTTTATC 1998
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1999 CATTCATTAGTTCATGGATATTGGAGTTGTGTTCATTTTTTGACTATGATTAATAATGTACTGTGATGAGATTC 2072
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2073 ATGTACTCGTTTTTGTGAGGACGTATTTTTACAATTTTCTTTATATGTCTAGGAGTGGGCATATGGTAAATCTA 2146
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2147 TGTTTAAATTTTTTGAAAAACTTCAAAACTGTTTTCCAAAGTCTCTGTACCATTTTATATTCTTACCAGCAGTG 2220
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2221 TATGGAGGTTCCATTTTTTCCTACCTCCTTGCCAACATCTGTTATTTTCCTTTTTTTTAAAAAAAATAGCTATT 2294
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2295 CTTGTAGATGTGAAGTGGTATCTAGTTGTAGTTTTCATTTGCATATCCTTAATGACTAATGATGTTGAGCATCT 2368
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2369 TTTCATGTGCTGATTGGCCATTTGTATATCTTTTTAGAGAAATGTTCATTTAGATTGTTTGCTCATTTAATTGG 2442
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2443 GTTGTCTTTTTGTTACTCTAAGAATTCTTTATATATTCTGGACATTAGTTCTTCATCAGATGTATGACTTAATA 2516
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2517 GGTATTTTCTCTCATTCTGTGGGTTCTTTTCACTTTCCTGATAGTATCCTTTGATGTACAAAGTTTTGAATTTT 2590
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2591 GTTGAAGTCCAGTTTGTTTTTTCCTTTTGTCACTCTTGCATTTGGTGTTGTATCTAAGACCCATTGCCTAATTC 2664
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2665 ACGGTCACAGATTTATACCTATGTTTTCTTCTACAAATTTTATAGTTTTACCCCTTATATTTGGGTCTTTGATC 2738
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2739 CTGATAGTGTTTTTCTGGTGAACAGAATTTGTTTAGGTTTTATATGAAAACCCACTGGGGTTATTAAGGTAGTT 2812
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2813 TTACTGTATTATTTGTAGAAGTTTTATAGTTTTGCTTCTCATCTTATTCTTAATCCACTGGAAACTACATATTG 2886
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2887 TATAGTCAGTGTTCATTTATATTTACTCAGATATTTGTCTTCTTAAGTGCTCACCATTTCTTCTCACAACTTAA 2960
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2961 GTCTTTCATCTAGGGGAACACTCTTCTACTGAAGAACATCTCTTAGAATTTCCTTTAGTGAAGGTCTCTTAGTT 3034
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3035 AGCAAAGTCAGTATTTGTTTGGTTTTTATGACTTAAATATTGTCTTATATTTGGGCTGTTTATTAAAAGATATA 3108
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3109 TTAATTTCATATGTGATTATTTTTTCTTAGTACATTGTCTTCTTGCTTCCATTTTTAAGACATTAGCTCTTGGT 3182
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3183 CTAAGTCCATATTCTTTCATGGATAAAGTGAATTTTCTCTCTGCTTATTTTCAATATATTCTTTTCTTCAGGGT 3256
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3257 TCCGTTATTTTTATGATGATACATTTAGGTGGTTTTTTTTTTCCCTTTTAAATCTGTCCAACTTGAGCTTCCTG 3330
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3331 AATATGAAGGGTGGAGTTTTTCATCACTTTGGGGAAATTCCAAGCCATTATCTTTTTTACAAAACCTTTCTAAC 3404
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3405 AGTTTATTGTTCTACTTATGAAATCCTGTTAGTTGTAATATCACTCTTGTCTTCCATGTCTCTTGTTTGTTTCT 3478
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3479 TATTTTTTACTTCTTTGGGCTTCCTTCTGAGCAATTTCTTCAGCCTGTCTTCCAGTTTGCATTTTCCTTTTCAA 3552
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3553 TTATATGTAATCTGCTGTCAAATCTGTCTTCAATTTCAACAATTATGTTTTTATTTCTGGAATTTCTGTTTGGC 3626
Query 307 ------------------------- 306
Sbjct 3627 TCCTTCTCAAATCTGCCTGGTCATT 3651
