Nucleotide Global Alignment
Description
- Query:
- TRCN0000466123
- Subject:
- XR_001738734.2
- Aligned Length:
- 2817
- Identities:
- 897
- Gaps:
- 1920
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATAAGACCCGCTGTCTGGCCCTGAGTAGGGTGTGACCTCCGCAGCCGCAGAGGAGGAGCGCAGCCCGGCCTCGA 74
Query 1 ---------------------------------------------ATGGCCATGGCAACCAAAGGAGGTACTGT 29
|||||||||||||||||||||||||||||
Sbjct 75 AGAACTTCTGCTTGGGTGGCTGAACTCTGATCTTGACCTAGAGTCATGGCCATGGCAACCAAAGGAGGTACTGT 148
Query 30 CAAAGCTGCTTCAGGATTCAATGCCATGGAAGATGCCCAGACCCTGAGGAAGGCCATGAAAGGGCTCGGCACCG 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CAAAGCTGCTTCAGGATTCAATGCCATGGAAGATGCCCAGACCCTGAGGAAGGCCATGAAAGGGCTCGGCACCG 222
Query 104 ATGAAGACGCCATTATTAGCGTCCTTGCCTACCGCAACACCGCCCAGCGCCAGGAGATCAGGACAGCCTACAAG 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATGAAGACGCCATTATTAGCGTCCTTGCCTACCGCAACACCGCCCAGCGCCAGGAGATCAGGACAGCCTACAAG 296
Query 178 AGCACCATCGGCAGGGACTTGATAGACGACCTGAAGTCAGAACTGAGTGGCAACTTCGAGC------------- 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGCACCATCGGCAGGGACTTGATAGACGACCTGAAGTCAGAACTGAGTGGCAACTTCGAGCAGGTGATTGTGGG 370
Query 239 -----------------------------------------------------AGGGAGCCGGCACTGATGAGG 259
|||||||||||||||||||||
Sbjct 371 GATGATGACGCCCACGGTGCTGTATGACGTGCAAGAGCTGCGAAGGGCCATGAAGGGAGCCGGCACTGATGAGG 444
Query 260 GCTGCCTAATTGAGATCCTGGCCTCCCGGACCCCTGAGGAGATCCGGCGCATAAGCCAAACCTACCAGCAGCAA 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCTGCCTAATTGAGATCCTGGCCTCCCGGACCCCTGAGGAGATCCGGCGCATAAGCCAAACCTACCAGCAGCAA 518
Query 334 TATGGACGGAGCCTTGAAGATGACATTCGCTCTGACACATCGTTCATGTTCCAGCGAGTGCTGGTGTCTCTGTC 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATGGACGGAGCCTTGAAGATGACATTCGCTCTGACACATCGTTCATGTTCCAGCGAGTGCTGGTGTCTCTGTC 592
Query 408 AGCT---------------------------------------------------------------------- 411
||||
Sbjct 593 AGCTGTGAGTGACTGCTTCTGATGGGGGGCGGGTTTTATCGAAATGTCCACTCTATCCCCTTTGCCAGCCTTTC 666
Query 412 -------------------------------------------------------------------------- 411
Sbjct 667 TCATCCTTTCAGCCCCTGACATGTGGATATTCCCCAGGTAGTGTTCTCAGACCCCTCTGTTCCTTTATCTTATT 740
Query 412 -------------------------------------------------------------------------- 411
Sbjct 741 TCTCCTTCAGAGACTCTGGCTAATCCTGCCTGCCCATTTTTTCTACTTTAATTTGATATTTACAAGTACCTAAC 814
Query 412 -------------------------------------------------------------------------- 411
Sbjct 815 ACCTGCCAGGTCCCCCTGTCACTCAGTGCATTGAGAGTTATGAAGATGATTCAGAGGCAGTTCCTGGGCCTTAA 888
Query 412 -------------------------------------------------------------------------- 411
Sbjct 889 GAGTATATATTGTCATAAGGGAATACATCAGGTACACAGTTGCTAGAAGGCATGAAAAGATTACATGCCAAAGG 962
Query 412 -------------------------------------------------------------------------- 411
Sbjct 963 AGAGGCGCATAGGAAAAAGAAGATTCAAGGAGAAAATTTGGTTGTAGAAACAAAGAAAAGCCTTCATGACAGAG 1036
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1037 ATGCTGGTTCAGAGAGGACTTGGAGGATTACTAGAATTTCAAGAGGCAGAGACGTGGGTGGGTGTATTGCAGAC 1110
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1111 AGGAAGAACAGCAAGAATAAGGCAGGGAACATGGGGTTCAGGGAACAACTGGGTGAACAGTTGGGCTGGTGATT 1184
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1185 CTGGAAACAGGGTGGGAGGATAAACTGGAATTCTATGTTGGGAGCAGTTTACACTTATTTATTTGGGAGCAGTA 1258
Query 412 -------------------------------------------------------------------------- 411
Sbjct 1259 GATGACGTGATGATGACAACGATGATGGGAGTGATGTGACTGGAGCTGCACTTTCAGAAGAGTAATGTAATAGT 1332
Query 412 -----------------------------------------------GGTGGGAGGGATGAAGGAAATTATCTG 438
|||||||||||||||||||||||||||
Sbjct 1333 GACGTGTAGGATGAACAGTGGAGAGGAACTGGAGGCTGGACGACCAGGGTGGGAGGGATGAAGGAAATTATCTG 1406
Query 439 GACGATGCTCTCGTGAGACAGGATGCCCAGGACCTGTATGAGGCTGGAGAGAAGAAATGGGGGACAGATGAGGT 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GACGATGCTCTCGTGAGACAGGATGCCCAGGACCTGTATGAGGCTGGAGAGAAGAAATGGGGGACAGATGAGGT 1480
Query 513 GAAATTTCTAACTGTTCTCTGTTCCCGGAACCGAAATCACCTGTTGCATGTGTTTGATGAATACAAAAGGATAT 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GAAATTTCTAACTGTTCTCTGTTCCCGGAACCGAAATCACCTGTTGCATGTGTTTGATGAATACAAAAGGATAT 1554
Query 587 CACAGAAGGATATTGAACAGAGTATTAAATCTGAAACATCTGGTAGCTTTGAAGATGCTCTGCTGGCTATAGTA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CACAGAAGGATATTGAACAGAGTATTAAATCTGAAACATCTGGTAGCTTTGAAGATGCTCTGCTGGCTATAGTA 1628
Query 661 AAGTGCATGAGGAACAAATCTGCATATTTTGCTGAAAAGCTCTATAAATCGATGAAGGGCTTGGGCACCGATGA 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAGTGCATGAGGAACAAATCTGCATATTTTGCTGAAAAGCTCTATAAATCGATGAAGGGCTTGGGCACCGATGA 1702
Query 735 TAACACCCTCATCAGAGTGATGGTTTCTCGAGCAGAAATTGACATGTTGGATATCCGGGCACACTTCAAGAGAC 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TAACACCCTCATCAGAGTGATGGTTTCTCGAGCAGAAATTGACATGTTGGATATCCGGGCACACTTCAAGAGAC 1776
Query 809 TCTATGGAAAGTCTCTGTACTCGTTCATCAAGGGTGACACATCTGGAGACTACAGGAAAGTACTGCTTGTTCTC 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCTATGGAAAGTCTCTGTACTCGTTCATCAAGGGTGACACATCTGGAGACTACAGGAAAGTACTGCTTGTTCTC 1850
Query 883 TGTGGAGGAGATGAT----------------------------------------------------------- 897
|||||||||||||||
Sbjct 1851 TGTGGAGGAGATGATTAAAATAAAAATCCCAGAAGGACAGGAGGATTCTCAACACTTTGAATTTTTTTAACTTC 1924
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1925 ATTTTTCTACACTGCTATTATCATTATCTCAGAATGCTTATTTCCAATTAAAACGCCTACAGCTGCCTCCTAGA 1998
Query 898 -------------------------------------------------------------------------- 897
Sbjct 1999 ATATAGACTGTCTGTATTATTATTCACCTATAATTAGTCATTATGATGCTTTAAAGCTGTACTTGCATTTCAAA 2072
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2073 GCTTATAAGATATAAATGGAGATTTTAAAGTAGAAATAAATATGTATTCCATGTTTTTAAAAGATTACTTTCTA 2146
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2147 CTTTGTGTTTCACAGACATTGAATATATTAAATTATTCCATATTTTCTTTTCAGTGAAAAATTTTTTAAATGGA 2220
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2221 AGACTGTTCTAAAATCACTTTTTTCCCTAATCCAATTTTTAGAGTGGCTAGTAGTTTCTTCATTTGAAATTGTA 2294
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2295 AGCATCCGGTCAGTAAGAATGCCCATCCAGTTTTCTATATTTCATAGTCAAAGCCTTGAAAGCATCTACAAATC 2368
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2369 TCTTTTTTTAGGTTTTGTCCATAGCATCAGTTGATCCTTACTAAGTTTTTCATGGGAGACTTCCTTCATCACAT 2442
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2443 CTTATGTTGAAATCACTTTCTGTAGTCAAAGTATACCAAAACCAATTTATCTGAACTAAATTCTAAAGTATGGT 2516
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2517 TATACAAACCATATACATCTGGTTACCAAACATAAATGCTGAACATTCCATATTATTATAGTTAATGTCTTAAT 2590
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2591 CCAGCTTGCAAGTGAATGGAAAAAAAAATAAGCTTCAAACTAGGTATTCTGGGAATGATGTAATGCTCTGAATT 2664
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2665 TAGTATGATATAAAGAAAACTTTTTTGTGCTAAAAATACTTTTTAAAATCAATTTTGTTGATTGTAGTAATTTC 2738
Query 898 -------------------------------------------------------------------------- 897
Sbjct 2739 TATTTGCACTGTGCCTTTCAACTCCAGAAACATTCTGAAGATGTACTTGGATTTAATTAAAAAGTTCACTTTGT 2812
Query 898 ----- 897
Sbjct 2813 AAGAA 2817
