Nucleotide Global Alignment

Description

Query:
TRCN0000466123
Subject:
XR_001738734.2
Aligned Length:
2817
Identities:
897
Gaps:
1920

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATAAGACCCGCTGTCTGGCCCTGAGTAGGGTGTGACCTCCGCAGCCGCAGAGGAGGAGCGCAGCCCGGCCTCGA  74

Query    1  ---------------------------------------------ATGGCCATGGCAACCAAAGGAGGTACTGT  29
                                                         |||||||||||||||||||||||||||||
Sbjct   75  AGAACTTCTGCTTGGGTGGCTGAACTCTGATCTTGACCTAGAGTCATGGCCATGGCAACCAAAGGAGGTACTGT  148

Query   30  CAAAGCTGCTTCAGGATTCAATGCCATGGAAGATGCCCAGACCCTGAGGAAGGCCATGAAAGGGCTCGGCACCG  103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CAAAGCTGCTTCAGGATTCAATGCCATGGAAGATGCCCAGACCCTGAGGAAGGCCATGAAAGGGCTCGGCACCG  222

Query  104  ATGAAGACGCCATTATTAGCGTCCTTGCCTACCGCAACACCGCCCAGCGCCAGGAGATCAGGACAGCCTACAAG  177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATGAAGACGCCATTATTAGCGTCCTTGCCTACCGCAACACCGCCCAGCGCCAGGAGATCAGGACAGCCTACAAG  296

Query  178  AGCACCATCGGCAGGGACTTGATAGACGACCTGAAGTCAGAACTGAGTGGCAACTTCGAGC-------------  238
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  297  AGCACCATCGGCAGGGACTTGATAGACGACCTGAAGTCAGAACTGAGTGGCAACTTCGAGCAGGTGATTGTGGG  370

Query  239  -----------------------------------------------------AGGGAGCCGGCACTGATGAGG  259
                                                                 |||||||||||||||||||||
Sbjct  371  GATGATGACGCCCACGGTGCTGTATGACGTGCAAGAGCTGCGAAGGGCCATGAAGGGAGCCGGCACTGATGAGG  444

Query  260  GCTGCCTAATTGAGATCCTGGCCTCCCGGACCCCTGAGGAGATCCGGCGCATAAGCCAAACCTACCAGCAGCAA  333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCTGCCTAATTGAGATCCTGGCCTCCCGGACCCCTGAGGAGATCCGGCGCATAAGCCAAACCTACCAGCAGCAA  518

Query  334  TATGGACGGAGCCTTGAAGATGACATTCGCTCTGACACATCGTTCATGTTCCAGCGAGTGCTGGTGTCTCTGTC  407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TATGGACGGAGCCTTGAAGATGACATTCGCTCTGACACATCGTTCATGTTCCAGCGAGTGCTGGTGTCTCTGTC  592

Query  408  AGCT----------------------------------------------------------------------  411
            ||||                                                                      
Sbjct  593  AGCTGTGAGTGACTGCTTCTGATGGGGGGCGGGTTTTATCGAAATGTCCACTCTATCCCCTTTGCCAGCCTTTC  666

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  667  TCATCCTTTCAGCCCCTGACATGTGGATATTCCCCAGGTAGTGTTCTCAGACCCCTCTGTTCCTTTATCTTATT  740

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  741  TCTCCTTCAGAGACTCTGGCTAATCCTGCCTGCCCATTTTTTCTACTTTAATTTGATATTTACAAGTACCTAAC  814

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  815  ACCTGCCAGGTCCCCCTGTCACTCAGTGCATTGAGAGTTATGAAGATGATTCAGAGGCAGTTCCTGGGCCTTAA  888

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  889  GAGTATATATTGTCATAAGGGAATACATCAGGTACACAGTTGCTAGAAGGCATGAAAAGATTACATGCCAAAGG  962

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct  963  AGAGGCGCATAGGAAAAAGAAGATTCAAGGAGAAAATTTGGTTGTAGAAACAAAGAAAAGCCTTCATGACAGAG  1036

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1037  ATGCTGGTTCAGAGAGGACTTGGAGGATTACTAGAATTTCAAGAGGCAGAGACGTGGGTGGGTGTATTGCAGAC  1110

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1111  AGGAAGAACAGCAAGAATAAGGCAGGGAACATGGGGTTCAGGGAACAACTGGGTGAACAGTTGGGCTGGTGATT  1184

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1185  CTGGAAACAGGGTGGGAGGATAAACTGGAATTCTATGTTGGGAGCAGTTTACACTTATTTATTTGGGAGCAGTA  1258

Query  412  --------------------------------------------------------------------------  411
                                                                                      
Sbjct 1259  GATGACGTGATGATGACAACGATGATGGGAGTGATGTGACTGGAGCTGCACTTTCAGAAGAGTAATGTAATAGT  1332

Query  412  -----------------------------------------------GGTGGGAGGGATGAAGGAAATTATCTG  438
                                                           |||||||||||||||||||||||||||
Sbjct 1333  GACGTGTAGGATGAACAGTGGAGAGGAACTGGAGGCTGGACGACCAGGGTGGGAGGGATGAAGGAAATTATCTG  1406

Query  439  GACGATGCTCTCGTGAGACAGGATGCCCAGGACCTGTATGAGGCTGGAGAGAAGAAATGGGGGACAGATGAGGT  512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GACGATGCTCTCGTGAGACAGGATGCCCAGGACCTGTATGAGGCTGGAGAGAAGAAATGGGGGACAGATGAGGT  1480

Query  513  GAAATTTCTAACTGTTCTCTGTTCCCGGAACCGAAATCACCTGTTGCATGTGTTTGATGAATACAAAAGGATAT  586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GAAATTTCTAACTGTTCTCTGTTCCCGGAACCGAAATCACCTGTTGCATGTGTTTGATGAATACAAAAGGATAT  1554

Query  587  CACAGAAGGATATTGAACAGAGTATTAAATCTGAAACATCTGGTAGCTTTGAAGATGCTCTGCTGGCTATAGTA  660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CACAGAAGGATATTGAACAGAGTATTAAATCTGAAACATCTGGTAGCTTTGAAGATGCTCTGCTGGCTATAGTA  1628

Query  661  AAGTGCATGAGGAACAAATCTGCATATTTTGCTGAAAAGCTCTATAAATCGATGAAGGGCTTGGGCACCGATGA  734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AAGTGCATGAGGAACAAATCTGCATATTTTGCTGAAAAGCTCTATAAATCGATGAAGGGCTTGGGCACCGATGA  1702

Query  735  TAACACCCTCATCAGAGTGATGGTTTCTCGAGCAGAAATTGACATGTTGGATATCCGGGCACACTTCAAGAGAC  808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TAACACCCTCATCAGAGTGATGGTTTCTCGAGCAGAAATTGACATGTTGGATATCCGGGCACACTTCAAGAGAC  1776

Query  809  TCTATGGAAAGTCTCTGTACTCGTTCATCAAGGGTGACACATCTGGAGACTACAGGAAAGTACTGCTTGTTCTC  882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCTATGGAAAGTCTCTGTACTCGTTCATCAAGGGTGACACATCTGGAGACTACAGGAAAGTACTGCTTGTTCTC  1850

Query  883  TGTGGAGGAGATGAT-----------------------------------------------------------  897
            |||||||||||||||                                                           
Sbjct 1851  TGTGGAGGAGATGATTAAAATAAAAATCCCAGAAGGACAGGAGGATTCTCAACACTTTGAATTTTTTTAACTTC  1924

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 1925  ATTTTTCTACACTGCTATTATCATTATCTCAGAATGCTTATTTCCAATTAAAACGCCTACAGCTGCCTCCTAGA  1998

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 1999  ATATAGACTGTCTGTATTATTATTCACCTATAATTAGTCATTATGATGCTTTAAAGCTGTACTTGCATTTCAAA  2072

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2073  GCTTATAAGATATAAATGGAGATTTTAAAGTAGAAATAAATATGTATTCCATGTTTTTAAAAGATTACTTTCTA  2146

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2147  CTTTGTGTTTCACAGACATTGAATATATTAAATTATTCCATATTTTCTTTTCAGTGAAAAATTTTTTAAATGGA  2220

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2221  AGACTGTTCTAAAATCACTTTTTTCCCTAATCCAATTTTTAGAGTGGCTAGTAGTTTCTTCATTTGAAATTGTA  2294

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2295  AGCATCCGGTCAGTAAGAATGCCCATCCAGTTTTCTATATTTCATAGTCAAAGCCTTGAAAGCATCTACAAATC  2368

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2369  TCTTTTTTTAGGTTTTGTCCATAGCATCAGTTGATCCTTACTAAGTTTTTCATGGGAGACTTCCTTCATCACAT  2442

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2443  CTTATGTTGAAATCACTTTCTGTAGTCAAAGTATACCAAAACCAATTTATCTGAACTAAATTCTAAAGTATGGT  2516

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2517  TATACAAACCATATACATCTGGTTACCAAACATAAATGCTGAACATTCCATATTATTATAGTTAATGTCTTAAT  2590

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2591  CCAGCTTGCAAGTGAATGGAAAAAAAAATAAGCTTCAAACTAGGTATTCTGGGAATGATGTAATGCTCTGAATT  2664

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2665  TAGTATGATATAAAGAAAACTTTTTTGTGCTAAAAATACTTTTTAAAATCAATTTTGTTGATTGTAGTAATTTC  2738

Query  898  --------------------------------------------------------------------------  897
                                                                                      
Sbjct 2739  TATTTGCACTGTGCCTTTCAACTCCAGAAACATTCTGAAGATGTACTTGGATTTAATTAAAAAGTTCACTTTGT  2812

Query  898  -----  897
                 
Sbjct 2813  AAGAA  2817

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