Nucleotide Global Alignment
Description
- Query:
- TRCN0000466155
- Subject:
- NR_136543.1
- Aligned Length:
- 4220
- Identities:
- 312
- Gaps:
- 3908
Alignment
Query 1 --------------------------------------------ATGGAAATTATATTAGAACTTCAGCAAAGT 30
||||||||||||||||||||||||||||||
Sbjct 1 TGAACTGAAAGAACAAATCGCCTACTTCAGGCGGTGGCAAGCGTATGGAAATTATATTAGAACTTCAGCAAAGT 74
Query 31 GCACAGCTGCATAATAGAGAAGCCGGCACTCAGATTGACAGGCAAATAAGCCAGCTTGTGGAAGGGGCCTCTGG 104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCACAGCTGCATAATAGAGAAGCCGGCACTCAGATTGACAGGCAAATAAGCCAGCTTGTGGAAGGGGCCTCTGG 148
Query 105 GTGGCAGCTCTGGGCTTTTGGGTGTTGGACAACCATAGGCAAAACTGAAATGGAACAGGGGCAGAAAATAGCAC 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGGCAGCTCTGGGCTTTTGGGTGTTGGACAACCATAGGCAAAACTGAAATGGAACAGGGGCAGAAAATAGCAC 222
Query 179 ACTTTTACTCTACGCAACTGTTGCTTTTTCATGATCTTCAGGAATTTTACTGGGATAATTATCCAAATAAATTG 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTTTTACTCTACGCAACTGTTGCTTTTTCATGATCTTCAGGAATTTTACTGGGATAATTATCCAAATAAATTG 296
Query 253 CAAGCATTCTATCCAAATGGAGCTCTTTCTGAGATGAAGAGAATTCTCAATGTCAAGATT-------------- 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAAGCATTCTATCCAAATGGAGCTCTTTCTGAGATGAAGAGAATTCTCAATGTCAAGATTTGAACAAGAAGAGA 370
Query 313 -------------------------------------------------------------------------- 312
Sbjct 371 ATGGAATACACAATATGGACATCCATAAAAATTCATCAGAGAGCATTTTACTACTGAGCTGCAAAGATGACAAG 444
Query 313 -------------------------------------------------------------------------- 312
Sbjct 445 AGCACCTCAAAGGCAGCAGCCTCAAGGAGCAGCCATGGCCCCAGACTTGTCGCACGGATGCAGAAAACTTAATG 518
Query 313 -------------------------------------------------------------------------- 312
Sbjct 519 GAGGAGGCTGAGGTCAGAATGGGAAGAGTTTTTAAAAAATAAAAAGGGGAGCTAATATGTGAGGAACTGATTGC 592
Query 313 -------------------------------------------------------------------------- 312
Sbjct 593 TGTGCATTATTTTCCACTGAACAGACCTTCTTTTAACTTCTAATCTCAAGCACATAGCAGCTGTTGTTTTCATA 666
Query 313 -------------------------------------------------------------------------- 312
Sbjct 667 TTAAAGATCAGTAAGTGTTTGTTGAATGAATGTATAAATTCTTCCCCAATCTCTGTTCCATGTAATAAGAACTA 740
Query 313 -------------------------------------------------------------------------- 312
Sbjct 741 AGTTAGCATTCAATTATAAAGAGGACTTAGAAAGTCTGCAGACATTTTTGATCAAAAATCCTTTTAACTGTCTT 814
Query 313 -------------------------------------------------------------------------- 312
Sbjct 815 CTTATGGTTCCCGGTAACACCTAAGCCCAAAAAACTCAGGTCATTTCTTGCCTGTACTGTTGCAATAGCCTCAT 888
Query 313 -------------------------------------------------------------------------- 312
Sbjct 889 AATAACTAGTCTTCTCCTTTATCAACCACAGTCGTCTCCGCTACACAAAGAAGAGAGGGTGCTAATCTAAAGTG 962
Query 313 -------------------------------------------------------------------------- 312
Sbjct 963 TAAATTATTTTAAATCAGCACCCTTCTTGTAATTTCCCAGTGGTTTTTCCTGTCATAAGAATAACATGCAAAAT 1036
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1037 TCCTTGCTTGCAAAGCCAGGTATGACCTTGCCCCGTCTACCTTACTGGCATCGTCTCTCATGACTCTTCCCCTT 1110
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1111 TTTCACTCTCCATCTTGCCTTTTCCCAACCATGCCTGCTAGTGAGCCTTAGCCCTTGTGTTTTCTCTGCCAGGG 1184
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1185 ATGCATGACTGGCTTCTTTACTTTATTCTGATCTCTCTGCTCAAATGTCATCTTTTTAGAGATAGCTTTCCTAA 1258
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1259 ACATCTTTAAAAGTACCCCATGAACTGTGAAACACCTTTCCTGCTTTTTCTTCATAGTACTTATCACTTCCTGA 1332
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1333 TATTATGTTAGACAACAAGCAAATAAGTATATGCTGTTCCCACTAAAATATAAGCTCCATTTGAACAGGAGCCT 1406
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1407 TGATTATTCCTGAGTATACCCCTAGTGCCCAGAACCTAGTAGGGCTTTAATAAATATTAGATTCATTTGTTGAA 1480
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1481 TGAAAAAATGAATGAATAATTGAATAAAGATATCCAGGTAGAGTGTCCGGGCAGCCCAACCTATGTGAAGCCAG 1554
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1555 TACAAGAATGTTTCTGTGACATAGTGAGCGCAATTATTCCTCTAAATGATGAACTTGCATGAGTACACAAGGAT 1628
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1629 AAAATTAAGCACGTAGTTTAGATTTCTGCAAGTCTCTTCCTCAGATTGAGGAAAAACAAAGAAATTGAGCTTAT 1702
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1703 TCTCACCTCATTCTTACATGAACTAAATCCAGAATAAAGCATCATTTAAATACCAAGCACATCCCTACCTCAGC 1776
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1777 CACTCATGGAATACTTTATCTGTAAAGGGACAGATAGATAGTAAATATTTTTGGCTTTGGGGACCGTACAGTCT 1850
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1851 GTGTCGCCACTACTCAGCACTTCTGTTGAGGTGTGGAATCAGCCCTAGACAACACATAAACAAATGGGTGTGGC 1924
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1925 TGTGTTCCAATAAAATGTTATTTATAAAACTAGGAAATCAGCAGATTTAGTCCACAGGCTGTAGTTTGCTGACC 1998
Query 313 -------------------------------------------------------------------------- 312
Sbjct 1999 CTTGAATTAGAGAGTCTTCCCCAAATCCTCTTCCCAAGTTATTGAAAGAATGCCCATAGGACCATAGCTCCCTC 2072
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2073 ACCTGGTTCTTTCAAGAAATGAGACAAATTCAGGGATGGTTGGAGGGTGGAACGCCTACCTGTGACATGACTAT 2146
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2147 TGAGCCTGATTTCTTTCCTTTTATCTCTTTAAAGTGAGTCAGGTCTTAACTTTAAACTGTCTCTAAAGTGGCAA 2220
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2221 TAACTGGGCCATGTCAAATACTCCCAATGACAAAATTTCTTCTTGGAGAATGAATGAGGGTTGCATACAGTGGT 2294
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2295 GTGTTGGTAAATGTTTAGCAACTGGCTCTCTTACTGATTTCTGTAGTGTAAATTCTCCCATCCTGGCCATCTGA 2368
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2369 AACTACCAATATGATGTCACTTGATGTAGAGTTGGGAAAAGACAGTCTCTTGAATAAGTATGAGCTGGTTCCAG 2442
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2443 CCCACTGCTGAACACATATTTAAAAGCTACAATAGCTCTGCTCACTGCCATTGCAGAGTCTGGAGGAAAGAGTA 2516
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2517 GCAGGCTTGATAGGAGCAATTGGCTGAATAATCTTTTGCAATGCCAATAAATAATGAAAAAGTATATAAATATA 2590
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2591 ACGCTGTATAGAAAGCTCTCAAGTTCAGTGTTTGGTTAAAATACATACTCAGTAAATGGTAGCTATTATTGTCT 2664
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2665 TAGTTTAAGTTATTGCAAGCATTAAAATTAAATGTTTAGCTACAGACTCAATCCAGTTTTAATGTCATTGTGTT 2738
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2739 AATAAGGCCTCTTAACATTGAAGCAACAAAGATAAAGGAATTTTTTTGTAGCTATTCACGATTCTGCCCAGCTC 2812
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2813 AAGGTAAAGATAGCAACAAAATACTCCAACCAGAATAAAAGAAGTCTCCACTTGACTGCAGCTCTTCGCAACAC 2886
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2887 TTCACAAGGGTCAAGCTGTGTTAGTTTCCTTCAGTGTTAAACAGAATGCATCTTAAGAGAATAGTTCAATTATT 2960
Query 313 -------------------------------------------------------------------------- 312
Sbjct 2961 GATTGAATAGTAGGTTCAAGTTGACTATAATCCCAACTAATACACTCTAAGACCAGGGATGGGCCGACAGAAGG 3034
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3035 GTAAAGTTTTCCACTCAAGTCTCGAGGCAAACACTCAGATAGAAGTAGTAATATGGATGCCTTCTATTATTTGG 3108
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3109 TCACATACAATACTGTTCCAGCCCAGTTGTGCAAAACTGGTGAAATAAAAGGCAAAAATATTGACAACAGTTTG 3182
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3183 GGTAACTGGATTCCAAAATGGGCATCCATCTAAGAGAAATTAATGAAAAAAAAGCATATGGACCTTGAAATACA 3256
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3257 TTAATACACAGTTTAGGTTTAAACACTCAGTTTTTATTAGAAAAGACTAACTTATCCTGTTTTGAACACTACAA 3330
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3331 AAGTGCTTTCTGAACCATTTACTCTCAAACCTCCTCCACCCATTCCCCTCCATCTATAACGCTTTCTGCACATC 3404
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3405 TGTAAAAGGTATGACTTAGTGTTTGGTCTGTGAAATAAGGTTAAAAAGGAAGCATTTCTTTTTACATTCTAGCT 3478
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3479 AATGTTGATATTTTTCTCATGCTTCTATTAGCACATAATTCAGATACATTAGTTTTGAAGTTTTGAATCTTCTC 3552
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3553 TGCTTCTTGAGGGCTCTCTGTTCTAGATCAACATGATCTGTGGAACACCAGCCAAGTCCTGGGCAGAACCCTCC 3626
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3627 CCGTTGTCCAAATATTACTGAATCAGTTGAGTTTTCTCTGTTGTCAATGAATTATTCCACATGTTTCTTTGGCT 3700
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3701 ACATTTTTTTTGGCTTTCTGTTCACAGTAAATATAGCCTTTGTTTTTAAAAACTTCTATTATGAAAATTCCAAA 3774
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3775 TATATGCAAATTAGAGAGAATAGCATAATGAACCTCTATGTGCTTATCACACATATAGGTTCAACTAATTAAAT 3848
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3849 TATATCAATTTATGGCCAATCTGGTTTCATTTATAACATCATTCGCTCATTCCTAACTCCCTGGATTATTTGAT 3922
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3923 TGACATGTTTCTAAAGTTCCTTTTAATCTGTAGGTTCCCCCTCTCATTTAATCTTTTGCAACTTATTCATTGAT 3996
Query 313 -------------------------------------------------------------------------- 312
Sbjct 3997 GAAACTGGGTTATTTGTCCTTTATTGTTTCTCTCATTCTGAAATATGCTGTAATGTCATTAACCATATTCTTCT 4070
Query 313 -------------------------------------------------------------------------- 312
Sbjct 4071 TTCCTGTATTTTCTGTAAGCTTTGAGCTAGGCAGAAATATTTTAATCAGATTCCTTTTTTTTTCTTTTAGCAAG 4144
Query 313 -------------------------------------------------------------------------- 312
Sbjct 4145 ATTTCTTCATAAATAATATTGTATGTGTTCATGAAAATAGAAATAAAAATAGAAATAAAGAAGAAATAACAGAA 4218
Query 313 -- 312
Sbjct 4219 AA 4220
