Nucleotide Global Alignment
Description
- Query:
- TRCN0000466194
- Subject:
- NR_135754.2
- Aligned Length:
- 5773
- Identities:
- 917
- Gaps:
- 4840
Alignment
Query 1 -------------------------ATGGCG-TCCGAACTTTGTAAGA-CGAT--CTCTG-TGGCAAGGCT-AG 43
.|.||| |||| || ||.| ||||| |||| ||| ||
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCG----------GAGCGCTGGCTCTGCTGGC---GCTGAG 61
Query 44 AAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTACTGA-AAGAT-GAGG 115
||| ||.||||.||| ||| ||||| .||.
Sbjct 62 AAA---------------------------------TGGACCAATTT-------------TGACAAGATATAGT 89
Query 116 GACTGCA--GTACTTGGAGAGACTCTATATGAAAAGGAACTC---CCTGACATC----CTTGCCAGAAAACCTT 180
| ||||| ||.|.||..|.|| ||||| || |.||.|.|| |||.||||||||||||
Sbjct 90 G-CTGCAGCGTGCCTGATGGGA---TATAT----------TCAGTCATGGCGTCCGAACTTTCCAGAAAACCTT 149
Query 181 GCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGG 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 150 GCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGG 223
Query 255 GTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTC 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 GTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTC 297
Query 329 TGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGAGGTTGGCGATTTGAAG 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 TGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTC-------------------- 351
Query 403 GAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACATGTGCCTTTCTCT 476
Sbjct 352 -------------------------------------------------------------------------- 351
Query 477 GCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATG 550
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 352 -CAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATG 424
Query 551 AGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTA 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 425 AGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTATGTA 498
Query 625 TACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTG 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 499 TACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTGGCTG 572
Query 699 TGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAG 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 573 TGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAG 646
Query 773 CTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTAT 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 CTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTAT 720
Query 847 CATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCT 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 CATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCT 794
Query 921 GCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTC 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 795 GCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTC 868
Query 995 CCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCC 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 869 CCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCC 942
Query 1069 ACCCAGTGTCTGCAGACTTTTGACCTGCTGAGT----------------------------------------- 1101
|||||||||||||||||||||||||||||||||
Sbjct 943 ACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGAC 1016
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1017 ACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCT 1090
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1091 AGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCCCCAA 1164
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1165 ATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGATTGA 1238
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1239 TGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCAGATT 1312
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1313 CCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTTATTT 1386
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1387 CCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTG 1460
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1461 GCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTG 1534
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1535 AGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGACTTTT 1608
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1609 GTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCAGAAA 1682
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1683 AATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTGAAGC 1756
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1757 TTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAAAACACACATT 1830
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1831 GAAATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATACTGACTTTGAAATATTTTTGTCAC 1904
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1905 ATGTGAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCC 1978
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1979 CAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCT 2052
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2053 CAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGAC 2126
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2127 GGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGT 2200
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2201 GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACAGCCC 2274
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2275 GTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAGCTTA 2348
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2349 CTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATA 2422
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2423 AACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTT 2496
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2497 CAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAA 2570
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2571 ATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAAAAAT 2644
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2645 TATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTATAATG 2718
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2719 CTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAACACCT 2792
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2793 GCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCA 2866
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2867 CTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAGTAAA 2940
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2941 ATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACCTCTA 3014
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3015 CATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTGCTAC 3088
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3089 CTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGGAATG 3162
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3163 GAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTTGTTT 3236
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3237 GAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAACAACA 3310
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3311 GCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGAT 3384
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3385 GAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGTCATT 3458
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3459 CTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAATTGT 3532
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3533 GTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACTAGGT 3606
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3607 AGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAGGTAA 3680
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3681 GTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGGCCTT 3754
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3755 CCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATTGTTA 3828
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3829 TCATACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTTGAGC 3902
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3903 ACATTCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCACTCTG 3976
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3977 GCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATTAAAC 4050
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4051 ATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTCACT 4124
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4125 TCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGG 4198
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4199 CTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAA 4272
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4273 TTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCTATAA 4346
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4347 AGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGGATTT 4420
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4421 CTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAAACAC 4494
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4495 ACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTTGTGG 4568
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4569 TTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGCCTTT 4642
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4643 TCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAAGTCT 4716
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4717 CGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTT 4790
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4791 GAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGC 4864
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4865 GCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGCATTG 4938
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4939 AGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTCAAGT 5012
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5013 TTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTGTCTC 5086
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5087 TAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTG 5160
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5161 AAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCA 5234
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5235 GAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTTCCAC 5308
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5309 TCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTA 5382
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5383 AATGATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCATTTGG 5456
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5457 AGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAATTGAG 5530
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5531 CTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGATACGA 5604
Query 1102 - 1101
Sbjct 5605 A 5605
