Nucleotide Global Alignment
Description
- Query:
- TRCN0000466194
- Subject:
- NR_135755.2
- Aligned Length:
- 6295
- Identities:
- 965
- Gaps:
- 5330
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGGTGAGTAGAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCCTCGTCGGGTGATTCAAGTGGCGAGGCTCTCTGACCCGGCCCCCCGGCGGGGACGCCCCAGACGTGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCAAAGCGTCCGGGTCGCGGCGAGTGGGACAGCGGAGCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCTCCCACTCTGCGGCCCGCGGCCCCTGGGACCCGAGAACCCTGATACCGGGTCCGTGAAATCCCTGCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGCTCGCTGCTTCCCAACTGTAACGATCTCAGTGGCTGGCTAACTCGGGCGAAACGGCGTGTGTTTTGCCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACTCTGCCAGTGTTTGTTACCACAGCTGAGAAAATAGCCTTTTACAAATGCTTTTAATATGTAGCTTATAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCTAATCTCCAGCGTTAGGAAATTGGAATGCGTATTCTACTAAATTGAGTACGGGGAGAAATGGACCAATTT 518
Query 1 ----------------------------------------------ATGGCGTCCGAACTTTGTAAGACGATCT 28
||||||||||||||||||||||||||||
Sbjct 519 TGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATCT 592
Query 29 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 666
Query 103 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGCCAGAAAA 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTG-------- 732
Query 177 CCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCA 250
|||||||||||||||||||||||||||||||||||||||||
Sbjct 733 ---------------------------------ATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCA 773
Query 251 TTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGGT 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 774 TTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGGT 847
Query 325 CGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGAGGTTGGCGATTT 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 CGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTC---------------- 905
Query 399 GAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACATGTGCCTTT 472
Sbjct 906 -------------------------------------------------------------------------- 905
Query 473 CTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTC 546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 906 -----CAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTC 974
Query 547 AATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTA 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 975 AATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTA 1048
Query 621 TGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049 TGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTG 1122
Query 695 GCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTC 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1123 GCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTC 1196
Query 769 CCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCT 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 CCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCT 1270
Query 843 GTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAG 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 GTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAG 1344
Query 917 AGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTC 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1345 AGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTC 1418
Query 991 TTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTG 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1419 TTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTG 1492
Query 1065 CTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGT------------------------------------- 1101
|||||||||||||||||||||||||||||||||||||
Sbjct 1493 CTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCT 1566
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1567 TGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACT 1640
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1641 CTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCC 1714
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1715 CCAAATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGA 1788
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1789 TTGATGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCA 1862
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1863 GATTCCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTT 1936
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1937 ATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCC 2010
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2011 CGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTC 2084
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2085 AGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGAC 2158
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2159 TTTTGTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCA 2232
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2233 GAAAAATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTG 2306
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2307 AAGCTTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAAAACACA 2380
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2381 CATTGAAATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATACTGACTTTGAAATATTTTTG 2454
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2455 TCACATGTGAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGT 2528
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2529 CGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCT 2602
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2603 GCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAG 2676
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2677 AGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCA 2750
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2751 AAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACA 2824
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2825 GCCCGTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAG 2898
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2899 CTTACTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTC 2972
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2973 CATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTC 3046
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3047 CTTTCAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTT 3120
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3121 TAAAATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAA 3194
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3195 AAATTATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTAT 3268
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3269 AATGCTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAAC 3342
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3343 ACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATC 3416
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3417 TGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAG 3490
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3491 TAAAATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACC 3564
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3565 TCTACATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTG 3638
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3639 CTACCTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGG 3712
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3713 AATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTT 3786
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3787 GTTTGAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAAC 3860
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3861 AACAGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAAT 3934
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3935 TGATGAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGT 4008
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4009 CATTCTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAA 4082
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4083 TTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACT 4156
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4157 AGGTAGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAG 4230
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4231 GTAAGTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGG 4304
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4305 CCTTCCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATT 4378
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4379 GTTATCATACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTT 4452
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4453 GAGCACATTCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCAC 4526
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4527 TCTGGCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATT 4600
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4601 AAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCT 4674
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4675 CACTTCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAG 4748
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4749 TTGGCTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAG 4822
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4823 CCAATTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCT 4896
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4897 ATAAAGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGG 4970
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4971 ATTTCTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAA 5044
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5045 ACACACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTT 5118
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5119 GTGGTTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGC 5192
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5193 CTTTTCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAA 5266
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5267 GTCTCGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGA 5340
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5341 GTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTG 5414
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5415 GCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGC 5488
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5489 ATTGAGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTC 5562
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5563 AAGTTTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTG 5636
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5637 TCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCC 5710
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5711 TTTGAAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATG 5784
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5785 GGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTT 5858
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5859 CCACTCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAG 5932
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5933 TCTAAATGATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCAT 6006
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 6007 TTGGAGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAAT 6080
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 6081 TGAGCTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGAT 6154
Query 1102 ----- 1101
Sbjct 6155 ACGAA 6159
