Nucleotide Global Alignment
Description
- Query:
- TRCN0000466194
- Subject:
- NR_135759.2
- Aligned Length:
- 6295
- Identities:
- 853
- Gaps:
- 5442
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGGTGAGTAGAGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCGCCTCGTCGGGTGATTCAAGTGGCGAGGCTCTCTGACCCGGCCCCCCGGCGGGGACGCCCCAGACGTGGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCAAAGCGTCCGGGTCGCGGCGAGTGGGACAGCGGAGCCGTCCGGGCCTCGGGTGGCCACAGCTGCCGGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCCTCCCACTCTGCGGCCCGCGGCCCCTGGGACCCGAGAACCCTGATACCGGGTCCGTGAAATCCCTGCTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGGCTCGCTGCTTCCCAACTGTAACGATCTCAGTGGCTGGCTAACTCGGGCGAAACGGCGTGTGTTTTGCCTA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGACTCTGCCAGTGTTTGTTACCACAGCTGAGAAAATAGCCTTTTACAAATGCTTTTAATATGTAGCTTATAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCTAATCTCCAGCGTTAGGAAATTGGAATGCGTATTCTACTAAATTGAGTACGGGGAGAAATGGACCAATTT 518
Query 1 ----------------------------------------------ATGGCGTCCGAACTTTGTAAGACGATCT 28
||||||||||||||||||||||||||||
Sbjct 519 TGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATCT 592
Query 29 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTTA 666
Query 103 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGCCAGAAAA 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTG-------- 732
Query 177 CCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCA 250
|||||||||||||||||||||||||||||||||||||||||
Sbjct 733 ---------------------------------ATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCCA 773
Query 251 TTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGGT 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 774 TTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGGT 847
Query 325 CGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGAGGTTGGCGATTT 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 CGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCA-------------- 907
Query 399 GAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACATGTGCCTTT 472
Sbjct 908 -------------------------------------------------------------------------- 907
Query 473 CTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCTC 546
Sbjct 908 -------------------------------------------------------------------------- 907
Query 547 AATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGTA 620
|||||||||||||||||||||||||||||
Sbjct 908 ---------------------------------------------GATTTAGGTCGATCTCGAGAACTACAGTA 936
Query 621 TGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 TGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGTG 1010
Query 695 GCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTC 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 GCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTC 1084
Query 769 CCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCT 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1085 CCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCT 1158
Query 843 GTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAG 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159 GTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAG 1232
Query 917 AGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTC 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1233 AGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTC 1306
Query 991 TTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTG 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1307 TTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTG 1380
Query 1065 CTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGT------------------------------------- 1101
|||||||||||||||||||||||||||||||||||||
Sbjct 1381 CTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCT 1454
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1455 TGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACT 1528
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1529 CTCTAGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCC 1602
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1603 CCAAATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGA 1676
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1677 TTGATGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCA 1750
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1751 GATTCCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTT 1824
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1825 ATTTCCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCC 1898
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1899 CGTGGCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTC 1972
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1973 AGTGAGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGAC 2046
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2047 TTTTGTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCA 2120
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2121 GAAAAATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTG 2194
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2195 AAGCTTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAAAACACA 2268
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2269 CATTGAAATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATACTGACTTTGAAATATTTTTG 2342
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2343 TCACATGTGAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGT 2416
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2417 CGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCT 2490
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2491 GCCTCAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAG 2564
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2565 AGACGGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCA 2638
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2639 AAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACA 2712
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2713 GCCCGTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAG 2786
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2787 CTTACTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTC 2860
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2861 CATAAACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTC 2934
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2935 CTTTCAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTT 3008
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3009 TAAAATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAA 3082
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3083 AAATTATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTAT 3156
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3157 AATGCTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAAC 3230
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3231 ACCTGCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATC 3304
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3305 TGCACTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAG 3378
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3379 TAAAATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACC 3452
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3453 TCTACATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTG 3526
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3527 CTACCTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGG 3600
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3601 AATGGAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTT 3674
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3675 GTTTGAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAAC 3748
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3749 AACAGCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAAT 3822
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3823 TGATGAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGT 3896
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3897 CATTCTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAA 3970
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3971 TTGTGTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACT 4044
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4045 AGGTAGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAG 4118
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4119 GTAAGTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGG 4192
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4193 CCTTCCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATT 4266
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4267 GTTATCATACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTT 4340
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4341 GAGCACATTCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCAC 4414
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4415 TCTGGCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATT 4488
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4489 AAACATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCT 4562
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4563 CACTTCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAG 4636
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4637 TTGGCTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAG 4710
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4711 CCAATTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCT 4784
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4785 ATAAAGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGG 4858
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4859 ATTTCTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAA 4932
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4933 ACACACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTT 5006
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5007 GTGGTTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGC 5080
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5081 CTTTTCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAA 5154
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5155 GTCTCGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGA 5228
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5229 GTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTG 5302
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5303 GCGCGCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGC 5376
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5377 ATTGAGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTC 5450
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5451 AAGTTTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTG 5524
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5525 TCTCTAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCC 5598
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5599 TTTGAAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATG 5672
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5673 GGCAGAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTT 5746
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5747 CCACTCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAG 5820
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5821 TCTAAATGATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCAT 5894
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5895 TTGGAGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAAT 5968
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5969 TGAGCTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGAT 6042
Query 1102 ----- 1101
Sbjct 6043 ACGAA 6047
