Nucleotide Global Alignment
Description
- Query:
- TRCN0000466199
- Subject:
- NR_003572.2
- Aligned Length:
- 5820
- Identities:
- 419
- Gaps:
- 5361
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAGGCGGGGCCGGGCCGGGGCGGGGTCTCGGGCAGGGGCGGGGAGCTTACCGACCTCCCGCCCCCGCTGCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTTTCTGGCCCTGCCAGTGTCTCCGCCGGTTGAAAGCGCGTGTCTGCGTCGGGTTCTGTTGGAGTGCGTTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGCCGTGGGTCCGCGCTGCTTCCACCCAACTTCCTGTTAGAGTTTCTCTCCTGTCACAATGGCATGGTCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCACTGCGACCTCTGCTTCCTGGGTTCAAGGATTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGATTACAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCACCCGAGGACGGGTCACCATGGCTTTGGAGCACCTGGTAGTGTGGCATGTCCACAGTGAAGACCAGAGTTT 370
Query 1 ----------------------------------------------------ATGGCGCCGAAAGCGAAGAAGG 22
|.|||.|||||||| |||||
Sbjct 371 CGTTGTCCTTAAGACTGACCTGGGGAGACGTGGCTGCAGGCCATTGAGGAAGACGGCACCGAAAGC---GAAGG 441
Query 23 AAGCTCCTGCCCCTCCTAAAGCTGAAGCCAAAGCGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTC 96
||||||||||.|||||||||||.||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 442 AAGCTCCTGCTCCTCCTAAAGCCGAAGCCAAAGTGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTC 515
Query 97 CACAGCCACA---AAAAGAAGAAGATCCGCACGTCACCCACCTTCCGGCGGCCGAAGACACTGCGACTCCGGAG 167
|.|||||||| |||| |||||||||||||.|||||.|||||||.|||||||.||||||||||||||.|||||
Sbjct 516 CGCAGCCACACGCAAAA-AAGAAGATCCGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTTCGGAG 588
Query 168 ACAGCCCAAATATCCTCGGAAGAGCGCTCCCAGGAGAAACAAGCTTGACCACTATGCTATCATCAAGTTTCCGC 241
.|||||||.||||||||||||||||.|.|||||||||||||||||||.|||||||||| |||||||||||||
Sbjct 589 GCAGCCCAGATATCCTCGGAAGAGCACCCCCAGGAGAAACAAGCTTGGCCACTATGCT---ATCAAGTTTCCGC 659
Query 242 TGACCACTGAGTCTGCCATGAAGAAGATAGAAGACAACAACACACTTGTGTTCATTGTGGATGTTAAAGCCAAC 315
||||||||||||..||| .|||||||||||||||.|.|||||..|||||||||.|.||||||||||||||||||
Sbjct 660 TGACCACTGAGTGGGCC-GGAAGAAGATAGAAGAAAGCAACATGCTTGTGTTCTTCGTGGATGTTAAAGCCAAC 732
Query 316 AAGCACCAGATTAAACAGGCTGTGAAGAAGCTGTATGACATTGATGTGGCCAAGGTCAACACCCTGATTCGGCC 389
|||||||||||.|.||||||||||||||||.|.|||||||.|||||||||||||||||.||||||||||...||
Sbjct 733 AAGCACCAGATCAGACAGGCTGTGAAGAAGGTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTTTCC 806
Query 390 TGATGGAGAGAAGAAGGC--ATATGTTCGACTGGCTCCTGATTACGATGCTTTGGATGTTGCCAACAAAATTGG 461
||||..||||||.||||| ||||||||||||||||||||||||.||.||||||||||||| ||||||||||||
Sbjct 807 TGATAAAGAGAACAAGGCATATATGTTCGACTGGCTCCTGATTATGAAGCTTTGGATGTTG-CAACAAAATTGG 879
Query 462 AATCATC------------------------------------------------------------------- 468
.||||||
Sbjct 880 GATCATCTAAACTGAGTCCAGCTGGCTAACTCTAAATACATGTGTATCTTTTCACCATAAAAGAATAATGTTTT 953
Query 469 -------------------------------------------------------------------------- 468
Sbjct 954 TCATAAGAGTGACAACTTAATTAGAATCAAATCTATAAGCTTTAAGATTTTACATTTCTGTAAGTATAATATTA 1027
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1028 GCTTATTTGACTAGAACTCAAGCAGAATAGGAATTTATGTTTGTTTTATATTCAAGTGATAACTTTGAAGACAT 1101
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1102 AGTTTTATTACACCAAAAATTTTATATTAATCTCATTTAAGTAAGTTTTATCCAAATCATGTTAACTTAAAAAA 1175
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1176 CATTTGATCAGTTCCTATATTTCTAGGAGTTTGGTGAATATTTATTTATAAATGGTTATTTTTTTCCAAGCCAA 1249
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1250 GTTAGAATAGAGCACTTTTATAGGATTTTATAAATGAATTTTGCAGTGCTATCCGGAGTTAAGAAAATATCACA 1323
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1324 TATACATTACATACAGTAATAGATATACAAACACAAATAGAGATTTCATAGCTTTCATCCTGAAATTTCAGCCA 1397
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1398 TGAATCAGGCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGATTGGATTAAGAAACATACATAGCTGG 1471
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1472 TCAAACAATTTCAGCCATGAAACAGGCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGACTGGATTGA 1545
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1546 GAGACACACGTAGCTGGTGAAACACAATTTCTGGGCATATCTGTGAAGGTGTTTCTGGAAGACACTGAGATAAC 1619
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1620 CCTGACCCAGTGTGGATGGGCACTGATATGGTTTGCCTGTGTCCCCACCCAGATCTCATCTTGAATTGTAGTTC 1693
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1694 CTATAATCCGTACATGTCGTGGGAGGGACCCAGTGGGAGGTGATTGAATCATGGTGGTTGTTACTGCCATTCTG 1767
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1768 TTTTCATGGCAGTGAGTGAGTTCTCATGATCCAATGGTTTCATAAGGGGCTGTTCCCCTTTGGCTCAGCACTTC 1841
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1842 TTCTTGTTGCTGCCATGTGAAGAAGGACGTCTTTGTTTCCCCTTCTGCCATGATTGTGAGGCCTCTGCAGCCAC 1915
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1916 GTGGAACTGTCAGCCCATTTAACCTCTTTGTTCTTTATAAATTGCTCAGACTCAGGTATTTCTTCACAGCTGTA 1989
Query 469 -------------------------------------------------------------------------- 468
Sbjct 1990 TAAAAATGGATGAATACAGGCACCATCCAATTGGTTGAGAGCCCAGATAGAATAACAAGGAAGAGGAAAGGTGA 2063
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2064 ATTATCTCCTGAAATTGAAACATCCTTCTTCTCCTGCCCTTGACATCAGAATCAGTGTCTCAGAGCTTTGGCCT 2137
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2138 CAGAATCAGAGTTACACCATTGGCTTCCCTGATTCTGAGTCCTTTATATCTGGAGTGAGTCATGCTGCCAGCTT 2211
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2212 TCCTGGTTCTCCAACTTGGAGACAGGCTATTGTGTAACTTCTCAGCCTCCATAATTATGTGAACCAATTCCCCT 2285
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2286 AATGAGTCTTCTCTCATCTATCTACATATATCCTATTGATTCTGCCTTTCTGGAGAACCCTGACTAATGTTATT 2359
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2360 ACAATAATACAAAATTCACTAGTTTATATAGAAGACTTGGTTTTTGTCTTTGCCCCATTTTGTATTTGTATTAT 2433
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2434 AACTGTGTATCTGGAAAATGGAACAAGTTTTTATCTTCTTCATATGAGGGCCAAAGCTTTTTTCTCACCAATAT 2507
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2508 TTTTGGAGATTTTTAAGATTTTCTTTTGTTTGGACATACAATCTTATGGAGGCTGAGAAATAAAATTTTTTCTA 2581
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2582 TTTTATTTTTCAGCCCCAGATGTTTGCTTTTGCAGATTCTTGAGCACATTGAGAGCATGGAGAGCACTCCAAGG 2655
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2656 CATGGAGTGGGGTGCCTAAAGTTTCAGTGATTACAGGGAGTTGAGAGACTCAACTGGGAAAGGAAAAGTCTAAA 2729
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2730 AGGAGGCAATTTGGAAGATAAAAATTTTCTCAAAGGAGCGATTAAATTTCTAAATAATTCTTAGTAAAATCATG 2803
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2804 TAAACAGGAAAGGAAATAGAATTAGTTCCATATTGGTGGAACACATAGCAGAGGTTTGAGAAGGGAGAATTTAG 2877
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2878 TCAACTGAGAAGTTCTCATGAAAGGAGCAAGTTCAAGATCACAGAGACACCTTGAAACAAAAAGCCAGGAATAA 2951
Query 469 -------------------------------------------------------------------------- 468
Sbjct 2952 CTTCCAACCCAAGAGGAGAACAGAGAGGCCTCAAAACCAAAGCTAGGATAAGAAACTTGTAGCCCAAGAGTTAT 3025
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3026 CTTCCAGACAAAGAAGCCTGAGATTCCAACGCAGCTTCAGAGAGTGCTCACTCAAAATGTTACTGAAACTGAAG 3099
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3100 GCTTTTTAATGACTTAGCCATGCCTGCAAAAGGCATTCCCTAAGGTGGCACAGAAGACGGAGCCCCCATATCCA 3173
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3174 AAGATAGCCAAGGAGAAAGAAAGACCCCTGTTGCCAGAGCCAGTGGGCAAAGGCAACAGAAAAGGAGACAAGGG 3247
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3248 TCCTAATGGGATGAGATCCTTTCGGATTTAGGCTTTTATACAAACTCCTGAGAACTGGCGGGTTGACAGCCATA 3321
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3322 AATGGGGTACCAAACTTTCTACTCATTGGATTACAAGTTCTCAGGCATCCAGAATGATGAACAAAATGACAATT 3395
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3396 TCTAGGGCTTCTGTGGGAGAGTATGGAAAGGTCTTTTTGAACCTTTTAATGCTGTCAACGGAAGAATGATGAGG 3469
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3470 TTCATAAATTTGGAAAGGAGACATTTCTTCATTTTTATGTTTATTTTTATTTTTTTTGAGACAGAGTTTCACTC 3543
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3544 TTGTTGCCCAGGCTGGAGTGCAATGGCGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTC 3617
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3618 TCCTGCCTCAGCCTCCTGATTAGCTGGGATTACAGATGCCCACCACCACACCTGGCTAATTTTTTGCAGTTTTA 3691
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3692 GTAGAGACAGGGTTTCATCATGTTGGCCAGGCTGGTCTGAAACTCATGAGCTCAGGTGATCCACTTGCCTTAGC 3765
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3766 CTCCCAAAGTGCTGGGATTGCAGGCATGAGCCACCCAACCAGTGAGAGATTTATTTCCTATAAAGGGTTGTAGC 3839
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3840 CTGCAGGGTTGTCCTTCTGACAGGCTGGGAAGCATAGCCTCCAGCCAGAAGCCAGAAACAGACTCTTCAAGGAG 3913
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3914 GAGGTAAAGGAAATAGCAATTTATGCTGACTGGAATGGCCAAATACATTTATTTAATAAGCTCCAGGAGGAGTC 3987
Query 469 -------------------------------------------------------------------------- 468
Sbjct 3988 ATGAATATTTATGGAAGGAGAAATGCATGCATGCACAATTGAGTTTCTGGCTTCTTCATGGGTCCCATGTACAA 4061
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4062 AAAATGGCAGTGTTAGCATGATCCCAGGGTGGAGTTTTCAGCCCTCTGACATTAAAAGGTGAAGCAGAGGACAT 4135
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4136 GAAAACTCGCTCTGTGCATCCTCTGTACGCTGGCCAGAACCTCTCTGTTGTGGGTGGTCTCTTATCAGGCAAGA 4209
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4210 AAGGAGAGGTTGATATCGGTAGTGGAGGCTTTGAAAGGGCTGGTTTCTGTTAAATCCTTAGGGAAGAAAGCCTC 4283
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4284 ATCATGGTTAGCAAAGGAGTGGGTTTAACGATGTGTATGTTAACCCCATCATCCCATCCTAGCAAAGCTGAGAA 4357
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4358 CTCAGTTTTGAAAGTTACTCTGTGGTCCCCTCAGCCAAGAGTGGTTCTGTTCAGTCAGTTGGGAGCTTATAATT 4431
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4432 TAATTTTTGTTTATCAATGCTAATGCGAAAGAGTACGCTGTCTTCATGGCAGCTGAATTTGCAAGAAACTCCTT 4505
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4506 GGATGGGGTTAATGGCAGCTGTATTTTTCTGGGAGCTCTGCTTTAATTGGACAAAGTAAGTTGTGGTAAGATTT 4579
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4580 CTTCTTTTATCTTCAGTATCTCAAATGTTTTCATTTAAATAATCTTTATAACAACTTTTGATGTCTGAGTGGAT 4653
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4654 TCCCATACAGTCATCTATTGTAAGACTTTCTGATTCCGTTTTTTTCCTTTGGTCATTATGAATAGGGCTTATGT 4727
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4728 AAATAATTGCATGGTAGCTTTTGATTGGAAATAACATCAAAGTAGTTGTCAAAATACTTAGGAATGTTATTTTT 4801
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4802 GGATTGTAAGGTGAGACTTGTTTAGCTTTGGAAAAAAATGCCCAACTTGTAATAGGGGAGGAAAAATAATTTTC 4875
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4876 TGTTTTCGGAATTCTTAGATGGGATGCTCTGTAAAAACTGACAGATTAAAATGAGAAAAACAGAAAAGTTGAAA 4949
Query 469 -------------------------------------------------------------------------- 468
Sbjct 4950 AACACGTATACCTTATGGTTACATGGGAGATATTCAGGGAAAAATGAGTAAATCTCCAACAGGTGGCTTTCAAT 5023
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5024 TCAAGCATAAATACTGTCTTCAACTTAAAGAAAGAAGATTTGAGGTGCAGTATTGGGGAGTTAACCAGCAAAAG 5097
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5098 CACATTAGACAAGGGTAAGGTTCATTATACAGACTTAAGTCCATGCATTCTCCATTGATAAGACTCTTTAGTGA 5171
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5172 TTTAGTTATCCTTCTCTTCTTGGTGTCGAGAGAGGTAGCTTTTAAATGGTGATTTCCTTTATAGATGTAAATTT 5245
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5246 TCCTTACACAAGTGTAACTTCTCTGTTTTCACAACTTCCTTTGTTAGCATTTTTTTTTTTCAAAATAATTAGCT 5319
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5320 TGGAATAATTCTTAAGCCAAAGGGACATATTTTGGGGTTGCATATTCTGGTTTCCTACCATTATATTTTGGGGT 5393
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5394 GGCATATTTTGGTCTTATACACTGTGTTCCACCGGCAATGAAAAGAGTTCTTGTTTTTCCTCCAGCAATTTGTC 5467
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5468 ATTTGTTAAAGAGTTTAGCAGTTCTAAGAGATATAGACCAGCTGTGCTATCTTTTTGTGGTTTTCAGTTCTCTA 5541
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5542 GTATGTTGAGCATCTTTTTGTAAGTGTACTTGCCATCTGTAGATCTTCTTTGGTGAGGCGTCTGTTCAGATCTG 5615
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5616 TGTGCATTTTTAATTGGGCTGTTTAACTTATTGTTTAGTTTTAACAATTTTTTATGTATTTTGAATACAAATTC 5689
Query 469 -------------------------------------------------------------------------- 468
Sbjct 5690 TCAGATCTGTATTTTGCAAATATTTTCTTCAATATGTGGCTTGTCTTTTGGTTCTCTTAACAAGGTCTCTTCCA 5763
Query 469 ------------------------------------------------ 468
Sbjct 5764 GAGTATAAACTGTAAATATTAAGAAAAAAAAAAAAAAAAAAAAAAAAA 5811
