Nucleotide Global Alignment
Description
- Query:
- TRCN0000466206
- Subject:
- XM_006517172.3
- Aligned Length:
- 3285
- Identities:
- 667
- Gaps:
- 2508
Alignment
Query 1 ATGCCCACCAACTTCACCGTGGTGCCCGTGGAGGCTCACGCCGACGGCGGCGGGGACGAGACTGCCGAGCGGAC 74
||||||||.|||||.||.||||||||.||||||||.|.|||||||||||.|||||||||..||||.|||||.||
Sbjct 1 ATGCCCACGAACTTTACGGTGGTGCCGGTGGAGGCGCGCGCCGACGGCGCCGGGGACGAAGCTGCTGAGCGCAC 74
Query 75 GGAGGCTCCGGGCACCCCCGAGGGCCCCGAGCCCGAGCG-------------CCCCAGCCCGGGAGATGGAAAT 135
|||.| ..||||||...||||| ||||| |||.|..||||||||||||||.
Sbjct 75 GGAAG---------AACCCGAGTCTCCCGA----GAGCGTGGATCAAACCTCCCCTACGCCGGGAGATGGAAAC 135
Query 136 CCAAGAGAAAACAGCCCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGAACATGGC 209
||.||.|||||||||||.|||.||||.|||||.|||||||||..||||||||.|||.||.||||||||||||||
Sbjct 136 CCCAGGGAAAACAGCCCTTTCATCAATAATGTGGAGGTGGAAAGAGAGAGCTACTTCGAGGGGAAGAACATGGC 209
Query 210 ACTTTTCGAGGAGGAGATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTACACCAACC 283
||||||.|||||.|||||||||||.||||||||||||||.||.|||||.|||||||||||||||||.|||||||
Sbjct 210 ACTTTTTGAGGAAGAGATGGACAGCAACCCCATGGTGTCATCACTGCTGAACAAGCTGGCCAACTATACCAACC 283
Query 284 TGAGCCAGGGCGTGGTGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCGCATGGGC 357
||||||||||.|||||.|||||.|||||.||.|||||.||||||.||||.||||.||||||.||.|||||||||
Sbjct 284 TGAGCCAGGGTGTGGTAGAGCATGAGGAAGATGAGGACAGCCGGAGGCGAGAGGTCAAGGCCCCACGCATGGGC 357
Query 358 ACCTTCATCGGCGTCTACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGACGTGGAT 431
|||||||||||.|||||||||||||||||||||||||||.||||.||.|||||.||||||||.|||||.|||||
Sbjct 358 ACCTTCATCGGAGTCTACCTGCCGTGCCTGCAGAACATCTTGGGTGTTATCCTTTTCCTGCGTCTGACCTGGAT 431
Query 432 CGTGGGGGTGGCTGGTGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTGACCGCCA 505
.|||||||..||||||||..||||||||||||||||.|||||||||||||||||.||||||||||||||.||||
Sbjct 432 TGTGGGGGCAGCTGGTGTTATGGAGTCCTTCCTCATTGTGGCCATGTGCTGCACCTGTACAATGCTGACAGCCA 505
Query 506 TTTCCATGAGTGCGATCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCGCTCGCTG 579
|.||||||||.||.||||||||||||||.|||||||||||.||.||.||.|||||||||||.||.||.||||||
Sbjct 506 TCTCCATGAGCGCCATCGCTACCAACGGCGTGGTCCCAGCGGGAGGCTCGTACTACATGATCTCCCGTTCGCTG 579
Query 580 GGACCCGAGTTTGGAGGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGTATATTTT 653
||.||.|||||||||||.|||||.|||||||||||||||.||||||||||.||||||||.||||||||.||..|
Sbjct 580 GGGCCTGAGTTTGGAGGTGCTGTTGGCCTCTGCTTCTACTTGGGCACGACATTTGCAGGCGCCATGTACATCCT 653
Query 654 GGGGACCATCGAGATTTTTCTGA-----------------------------CAGGC----ACGGAGGACGGCG 694
|||.|||||||||||.||.|||| ||||| ||||.|||.||||
Sbjct 654 GGGTACCATCGAGATCTTCCTGACCTACATCTCTCCAAGTGCGGCCATCTTCCAGGCAGAGACGGCGGATGGCG 727
Query 695 TGG-----GCA--------------GCCTGGGCCTGG--GCTTGGCCCAGGGAAACA-GACGG----------- 735
.|| ||| ||.||.|..||| |||..||||.||.|..|| |.|||
Sbjct 728 AGGCGGCCGCACTGTTGAACAACATGCGTGTGTATGGCAGCTGTGCCCTGGCACTCATGGCGGTGGTGGTCTTT 801
Query 736 -----------------CAGACA------CAC---------------------------CTGTCC--CCCA--- 754
|| ||| ||| ||.||| .|||
Sbjct 802 GTTGGTGTCAAATATGTCA-ACAAGCTGGCACTGGTCTTCTTAGCCTGTGTTGTGCTTTCTATCCTGGCCATCT 874
Query 755 --------GTGAT-------GCC---GCCCAAGCTG----CCCATGGG---GCTTTCTACGGAAGTTTC----- 798
||.|| ||| ||||.|.||| ||| || ||.|||||.|||| |
Sbjct 875 ATGCTGGTGTCATCAAGACAGCCTTTGCCCCACCTGACATCCC---GGTCTGCCTTCTAGGGAA----CCGCAC 941
Query 799 -------------------------------------------------------------------------- 798
Sbjct 942 GCTGGCAAATCGCAACTTTGATACCTGTGCCAAGATGCAGGTTGTCAGCAACGGTACAGTGACCACTGCACTCT 1015
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1016 GGCGCCTCTTCTGCAATGGCTCCAGCTTGGGTGCCACCTGTGATGAGTACTTTGCACAGAACAACGTTACTGAG 1089
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1090 ATACAGGGCATCCCTGGTGTGGCCAGTGGTGTCTTCCTGGATAACCTGTGGAGCACATATTCAGACAAGGGGGC 1163
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1164 ATTTGTGGAAAAGAAAGGTGTGTCCTCAGTGCCTGTGTCCGAGGAGAGCCGGCCTGGTGGATTGCCATACGTCC 1237
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1238 TCACAGACATCATGACCTACTTCACCATGCTAGTTGGCATCTACTTCCCGTCTGTAACTGGGATCATGGCAGGA 1311
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1312 TCCAACCGCTCCGGGGACCTCAAAGACGCCCAGAAGTCTATTCCAACAGGGACCATTCTGGCCATCGTGACTAC 1385
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1386 ATCTTTCATTTATCTTTCCTGCATAGTGCTGTTTGGGGCCTGCATTGAAGGTGTAGTCCTGCGAGATAAGTTTG 1459
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1460 GGGAGGCCTTGCAAGGGAACCTGGTCATTGGCATGCTGGCCTGGCCATCTCCCTGGGTCATTGTGATTGGCTCC 1533
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1534 TTCTTCTCCACCTGTGGTGCTGGCCTGCAGAGCCTGACTGGGGCACCCCGCCTACTGCAGGCCATTGCGCGTGA 1607
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1608 CGGAATCATCCCCTTCCTACAGGTGTTTGGTCATGGAAAGGCCAACGGGGAGCCCACATGGGCCCTGCTGCTCA 1681
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1682 CGGCTCTCATCTGTGAGACCGGTATCCTCATCGCCTCCCTGGACAGTGTGGCCCCCATCCTGTCCATGTTCTTC 1755
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1756 CTCATGTGCTACATGTTCGTCAATCTGGCCTGTGCCGTACAGACCCTGCTACGCACACCCAACTGGCGTCCACG 1829
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1830 CTTCAAGTTCTACCACTGGACCCTCTCCTTCCTTGGGATGAGTCTCTGCCTCGCGCTGATGTTCATCTGCTCCT 1903
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1904 GGTACTACGCCCTTTTCGCCATGCTCATTGCCGGCTGCATCTACAAGTACATCGAGTACCGCGGGGCTGAGAAG 1977
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1978 GAGTGGGGGGATGGCATCAGGGGCCTGTCACTGAATGCTGCCCGCTACGCCCTGCTGCGTGTGGAACATGGGCC 2051
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2052 CCCACATACCAAGAACTGGAGGCCCCAGGTGTTGGTGATGCTGAACCTGGACTCGGAGCAGTGTGTAAAGCACC 2125
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2126 CCCGCCTGCTGTCCTTCACCTCTCAGCTGAAGGCTGGCAAGGGCCTGACCATCGTGGGATCTGTGCTAGAGGGC 2199
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2200 ACCTACTTAGACAAGCATGTGGAGGCCCAGAGGGCTGAAGAGAATATCCGGTCTCTGATGAGTGCAGAGAAGAC 2273
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2274 GAAGGGCTTCTGCCAGCTGGTGGTGTCCTCCAACCTGCGAGATGGTGCGTCCCACCTGATCCAGTCGGCTGGCC 2347
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2348 TCGGTGGCATGAAACACAACACTGTCCTCATGGCCTGGCCAGAGGCTTGGAAGGAGGCAGATAATCCTTTCTCC 2421
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2422 TGGAAGAACTTTGTAGACACAGTCCGTGACACTACAGCAGCACATCAGGCCTTGTTGGTGGCCAAGAACATTGA 2495
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2496 CTTATTCCCACAAAACCAAGAGCGCTTCAGCGACGGGAACATTGATGTGTGGTGGATCGTGCATGACGGGGGCA 2569
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2570 TGCTCATGCTTCTGCCCTTTCTGCTGCGCCAGCACAAGGTGTGGCGAAAGTGCCGGATGCGCATCTTCACTGTG 2643
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2644 GCCCAGGTGGATGATAACAGCATCCAGATGAAGAAGGACCTGCAGATGTTCCTGTACCACCTCAGGATCAGTGC 2717
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2718 CGAGGTGGAGGTGGTGGAGATGGTTGAAAATGATATTTCCGCATTCACCTATGAGAAGACGCTAATGATGGAGC 2791
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2792 AGAGGTCACAGATGCTGAAACAGATGCAGTTGTCAAAGAATGAGCGGGAGAGAGAGGCCCAGCTGATTCATGAC 2865
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2866 AGGAACACTGCATCCCATACCACAGCAACTGCTAGAACCCAAGCCCCACCAACACCCGACAAAGTGCAGATGAC 2939
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2940 ATGGACGAAAGAGAAACTCATTGCAGAGAAACACAGGAACAAGGACACTGGCCCATCAGGCTTCAAAGACCTCT 3013
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3014 TCAGCCTAAAGCCAGAGTGGGGAAACCTGGACCAGTCCAACGTCAGGAGGATGCATACTGCTGTGAAGCTCAAC 3087
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3088 GGCGTAGTTCTCAACAAGTCCCAGGATGCCCAACTGGTCCTGCTGAATATGCCAGGCCCCCCAAAAAGTCGGCA 3161
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3162 GGGGGACGAGAACTACATGGAGTTCCTCGAGGTCCTGACGGAAGGGCTGAACAGGGTCCTCCTGGTCAGGGGTG 3235
Query 799 ----------------------------- 798
Sbjct 3236 GTGGCCGAGAAGTCATCACCATCTACTCC 3264
