Nucleotide Global Alignment
Description
- Query:
- TRCN0000466206
- Subject:
- XM_006517175.2
- Aligned Length:
- 3272
- Identities:
- 508
- Gaps:
- 2686
Alignment
Query 1 ATGCCCACCAACTTCACCGTGGTGCCCGTGGAGGCTCACGCCGACGGCGGCGGGGACGAGACTGCCGAGCGGAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGAGGCTCCGGGCACCCCCGAGGGCCCCGAGCCCGAGCGCCCCAGCCCGGGAGATGGAAATCCAAGAGAAAACA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GCCCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGAACATGGCACTTTTCGAGGAG 222
|||||||||||.|||||.
Sbjct 1 --------------------------------------------------------ATGGCACTTTTTGAGGAA 18
Query 223 GAGATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTACACCAACCTGAGCCAGGGCGT 296
|||||||||||.||||||||||||||.||.|||||.|||||||||||||||||.|||||||||||||||||.||
Sbjct 19 GAGATGGACAGCAACCCCATGGTGTCATCACTGCTGAACAAGCTGGCCAACTATACCAACCTGAGCCAGGGTGT 92
Query 297 GGTGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCGCATGGGCACCTTCATCGGCG 370
|||.|||||.|||||.||.|||||.||||||.||||.||||.||||||.||.||||||||||||||||||||.|
Sbjct 93 GGTAGAGCATGAGGAAGATGAGGACAGCCGGAGGCGAGAGGTCAAGGCCCCACGCATGGGCACCTTCATCGGAG 166
Query 371 TCTACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGACGTGGATCGTGGGGGTGGCT 444
||||||||||||||||||||||||||.||||.||.|||||.||||||||.|||||.|||||.|||||||..|||
Sbjct 167 TCTACCTGCCGTGCCTGCAGAACATCTTGGGTGTTATCCTTTTCCTGCGTCTGACCTGGATTGTGGGGGCAGCT 240
Query 445 GGTGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTGACCGCCATTTCCATGAGTGC 518
|||||..||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||.||||||||.||
Sbjct 241 GGTGTTATGGAGTCCTTCCTCATTGTGGCCATGTGCTGCACCTGTACAATGCTGACAGCCATCTCCATGAGCGC 314
Query 519 GATCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCGCTCGCTGGGACCCGAGTTTG 592
.||||||||||||||.|||||||||||.||.||.||.|||||||||||.||.||.||||||||.||.|||||||
Sbjct 315 CATCGCTACCAACGGCGTGGTCCCAGCGGGAGGCTCGTACTACATGATCTCCCGTTCGCTGGGGCCTGAGTTTG 388
Query 593 GAGGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGTATATTTTGGGGACCATCGAG 666
||||.|||||.|||||||||||||||.||||||||||.||||||||.||||||||.||..||||.|||||||||
Sbjct 389 GAGGTGCTGTTGGCCTCTGCTTCTACTTGGGCACGACATTTGCAGGCGCCATGTACATCCTGGGTACCATCGAG 462
Query 667 ATTTTTCTGA-----------------------------CAGGC----ACGGAGGACGGCGTGG-----GCA-- 700
||.||.|||| ||||| ||||.|||.||||.|| |||
Sbjct 463 ATCTTCCTGACCTACATCTCTCCAAGTGCGGCCATCTTCCAGGCAGAGACGGCGGATGGCGAGGCGGCCGCACT 536
Query 701 ------------GCCTGGGCCTGG--GCTTGGCCCAGGGAAACA-GACGG------------------------ 735
||.||.|..||| |||..||||.||.|..|| |.|||
Sbjct 537 GTTGAACAACATGCGTGTGTATGGCAGCTGTGCCCTGGCACTCATGGCGGTGGTGGTCTTTGTTGGTGTCAAAT 610
Query 736 ----CAGACA------CAC---------------------------CTGTCC--CCCA-----------GTGAT 759
|| ||| ||| ||.||| .||| ||.||
Sbjct 611 ATGTCA-ACAAGCTGGCACTGGTCTTCTTAGCCTGTGTTGTGCTTTCTATCCTGGCCATCTATGCTGGTGTCAT 683
Query 760 -------GCC---GCCCAAGCTG----CCCATGGG---GCTTTCTACGGAAGTTTC------------------ 798
||| ||||.|.||| ||| || ||.|||||.|||| |
Sbjct 684 CAAGACAGCCTTTGCCCCACCTGACATCCC---GGTCTGCCTTCTAGGGAA----CCGCACGCTGGCAAATCGC 750
Query 799 -------------------------------------------------------------------------- 798
Sbjct 751 AACTTTGATACCTGTGCCAAGATGCAGGTTGTCAGCAACGGTACAGTGACCACTGCACTCTGGCGCCTCTTCTG 824
Query 799 -------------------------------------------------------------------------- 798
Sbjct 825 CAATGGCTCCAGCTTGGGTGCCACCTGTGATGAGTACTTTGCACAGAACAACGTTACTGAGATACAGGGCATCC 898
Query 799 -------------------------------------------------------------------------- 798
Sbjct 899 CTGGTGTGGCCAGTGGTGTCTTCCTGGATAACCTGTGGAGCACATATTCAGACAAGGGGGCATTTGTGGAAAAG 972
Query 799 -------------------------------------------------------------------------- 798
Sbjct 973 AAAGGTGTGTCCTCAGTGCCTGTGTCCGAGGAGAGCCGGCCTGGTGGATTGCCATACGTCCTCACAGACATCAT 1046
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1047 GACCTACTTCACCATGCTAGTTGGCATCTACTTCCCGTCTGTAACTGGGATCATGGCAGGATCCAACCGCTCCG 1120
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1121 GGGACCTCAAAGACGCCCAGAAGTCTATTCCAACAGGGACCATTCTGGCCATCGTGACTACATCTTTCATTTAT 1194
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1195 CTTTCCTGCATAGTGCTGTTTGGGGCCTGCATTGAAGGTGTAGTCCTGCGAGATAAGTTTGGGGAGGCCTTGCA 1268
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1269 AGGGAACCTGGTCATTGGCATGCTGGCCTGGCCATCTCCCTGGGTCATTGTGATTGGCTCCTTCTTCTCCACCT 1342
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1343 GTGGTGCTGGCCTGCAGAGCCTGACTGGGGCACCCCGCCTACTGCAGGCCATTGCGCGTGACGGAATCATCCCC 1416
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1417 TTCCTACAGGTGTTTGGTCATGGAAAGGCCAACGGGGAGCCCACATGGGCCCTGCTGCTCACGGCTCTCATCTG 1490
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1491 TGAGACCGGTATCCTCATCGCCTCCCTGGACAGTGTGGCCCCCATCCTGTCCATGTTCTTCCTCATGTGCTACA 1564
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1565 TGTTCGTCAATCTGGCCTGTGCCGTACAGACCCTGCTACGCACACCCAACTGGCGTCCACGCTTCAAGTTCTAC 1638
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1639 CACTGGACCCTCTCCTTCCTTGGGATGAGTCTCTGCCTCGCGCTGATGTTCATCTGCTCCTGGTACTACGCCCT 1712
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1713 TTTCGCCATGCTCATTGCCGGCTGCATCTACAAGTACATCGAGTACCGCGGGGCTGAGAAGGAGTGGGGGGATG 1786
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1787 GCATCAGGGGCCTGTCACTGAATGCTGCCCGCTACGCCCTGCTGCGTGTGGAACATGGGCCCCCACATACCAAG 1860
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1861 AACTGGAGGCCCCAGGTGTTGGTGATGCTGAACCTGGACTCGGAGCAGTGTGTAAAGCACCCCCGCCTGCTGTC 1934
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1935 CTTCACCTCTCAGCTGAAGGCTGGCAAGGGCCTGACCATCGTGGGATCTGTGCTAGAGGGCACCTACTTAGACA 2008
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2009 AGCATGTGGAGGCCCAGAGGGCTGAAGAGAATATCCGGTCTCTGATGAGTGCAGAGAAGACGAAGGGCTTCTGC 2082
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2083 CAGCTGGTGGTGTCCTCCAACCTGCGAGATGGTGCGTCCCACCTGATCCAGTCGGCTGGCCTCGGTGGCATGAA 2156
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2157 ACACAACACTGTCCTCATGGCCTGGCCAGAGGCTTGGAAGGAGGCAGATAATCCTTTCTCCTGGAAGAACTTTG 2230
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2231 TAGACACAGTCCGTGACACTACAGCAGCACATCAGGCCTTGTTGGTGGCCAAGAACATTGACTTATTCCCACAA 2304
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2305 AACCAAGAGCGCTTCAGCGACGGGAACATTGATGTGTGGTGGATCGTGCATGACGGGGGCATGCTCATGCTTCT 2378
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2379 GCCCTTTCTGCTGCGCCAGCACAAGGTGTGGCGAAAGTGCCGGATGCGCATCTTCACTGTGGCCCAGGTGGATG 2452
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2453 ATAACAGCATCCAGATGAAGAAGGACCTGCAGATGTTCCTGTACCACCTCAGGATCAGTGCCGAGGTGGAGGTG 2526
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2527 GTGGAGATGGTTGAAAATGATATTTCCGCATTCACCTATGAGAAGACGCTAATGATGGAGCAGAGGTCACAGAT 2600
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2601 GCTGAAACAGATGCAGTTGTCAAAGAATGAGCGGGAGAGAGAGGCCCAGCTGATTCATGACAGGAACACTGCAT 2674
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2675 CCCATACCACAGCAACTGCTAGAACCCAAGCCCCACCAACACCCGACAAAGTGCAGATGACATGGACGAAAGAG 2748
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2749 AAACTCATTGCAGAGAAACACAGGAACAAGGACACTGGCCCATCAGGCTTCAAAGACCTCTTCAGCCTAAAGCC 2822
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2823 AGAGTGGGGAAACCTGGACCAGTCCAACGTCAGGAGGATGCATACTGCTGTGAAGCTCAACGGCGTAGTTCTCA 2896
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2897 ACAAGTCCCAGGATGCCCAACTGGTCCTGCTGAATATGCCAGGCCCCCCAAAAAGTCGGCAGGGGGACGAGAAC 2970
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2971 TACATGGAGTTCCTCGAGGTCCTGACGGAAGGGCTGAACAGGGTCCTCCTGGTCAGGGGTGGTGGCCGAGAAGT 3044
Query 799 ---------------- 798
Sbjct 3045 CATCACCATCTACTCC 3060
