Nucleotide Global Alignment
Description
- Query:
- TRCN0000466206
- Subject:
- XM_011513940.2
- Aligned Length:
- 3296
- Identities:
- 692
- Gaps:
- 2572
Alignment
Query 1 ATGCCCACCAACTTCACCGTGGTGCCCGTGGA-GGCTCACGCCGACGGC-----GGCGGGGACGAGACTGCCGA 68
| |||||| ||||.| || ||||.||
Sbjct 1 -------------------------------ATGGCTCA----GACGTCACTCTGG-----------CTGCTGA 28
Query 69 GCGGACGGAGGCTCCGGGCACCCCCGAGG-----------GCCCCGAGCCCGAGCGCCCCAGCCCGG---GAGA 128
| ||| ||||||| |.||| ||| |||.||.|.|.||| .|..||| ||||
Sbjct 29 G-GGA-GGAGGCT----GGACC----AGGACCAGCAAACAGCCACGTGACAGAG------GGTTCGGGAAGAGA 86
Query 129 TGGAAATCCAAGAGAAAACAGCCCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGA 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 87 TGGAAATCCAAGAGAAAACAGCCCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGA 160
Query 203 ACATGGCACTTTTCGAGGAGGAGATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTAC 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 161 ACATGGCACTTTTCGAGGAGGAGATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTAC 234
Query 277 ACCAACCTGAGCCAGGGCGTGGTGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCG 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 ACCAACCTGAGCCAGGGCGTGGTGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCG 308
Query 351 CATGGGCACCTTCATCGGCGTCTACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 CATGGGCACCTTCATCGGCGTCTACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGA 382
Query 425 CGTGGATCGTGGGGGTGGCTGGTGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTG 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 CGTGGATCGTGGGGGTGGCTGGTGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTG 456
Query 499 ACCGCCATTTCCATGAGTGCGATCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCG 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 ACCGCCATTTCCATGAGTGCGATCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCG 530
Query 573 CTCGCTGGGACCCGAGTTTGGAGGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGT 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 CTCGCTGGGACCCGAGTTTGGAGGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGT 604
Query 647 ATATTTTGGGGACCATCGAGATTTTTCTGA-----------------------------CAGGCACGGAGGACG 691
|||||||||||||||||||||||||||||| |||| |||||| |.
Sbjct 605 ATATTTTGGGGACCATCGAGATTTTTCTGACGTACATCTCCCCGGGTGCGGCCATCTTCCAGG--CGGAGG-CT 675
Query 692 GC--GTGGGCAGCCTGGGCCTGGGCTTG--GCCCAGGGAAACA--------GACGGCA----GACACACCTG-T 748
|| ||||..||.| |||| |.|.|| ||.| |||| .|||||| .||.|.|.|| |
Sbjct 676 GCAGGTGGCGAGGC--GGCC--GCCATGCTGCAC-----AACATGCGTGTGTACGGCACGTGCACGCTCGTGCT 740
Query 749 C----CCCCAGTGAT-------GCCGCC-----------CAAGCTGCCCATGG--------------------- 779
| |||..|||.| |.||.| |||||||.|..|||
Sbjct 741 CATGGCCCTGGTGGTCTTCGTGGGCGTCAAGTATGTCAACAAGCTGGCGCTGGTCTTCCTGGCCTGCGTCGTGC 814
Query 780 ----------GGCTTTCTA---CGG-------AAGT-----TTC------------------------------ 798
|||..|||| ||| |||| |||
Sbjct 815 TGTCCATCCTGGCCATCTATGCCGGCGTCATCAAGTCTGCCTTCGACCCCCCGGACATCCCGGTCTGCCTCCTG 888
Query 799 -------------------------------------------------------------------------- 798
Sbjct 889 GGGAACCGCACGCTGTCACGGCGCAGCTTCGATGCCTGCGTCAAGGCCTACGGCATCCACAACAACTCAGCCAC 962
Query 799 -------------------------------------------------------------------------- 798
Sbjct 963 CTCCGCGCTCTGGGGCCTCTTCTGCAACGGCTCCCAGCCCAGCGCCGCCTGTGACGAGTACTTCATCCAGAACA 1036
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1037 ACGTCACCGAAATCCAGGGCATCCCGGGCGCGGCCAGTGGTGTCTTCCTGGAGAACCTGTGGAGTACGTACGCG 1110
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1111 CACGCGGGGGCGTTTGTGGAGAAGAAAGGTGTGCCCTCGGTGCCCGTGGCAGAGGAGAGCCGTGCCAGCGCACT 1184
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1185 GCCCTACGTGCTCACCGACATCGCGGCCTCCTTCACCCTGCTGGTTGGCATCTACTTCCCTTCCGTGACCGGTA 1258
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1259 TCATGGCGGGTTCAAACCGGTCCGGGGACCTCAAGGATGCACAGAAGTCCATCCCCACGGGGACCATCCTGGCC 1332
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1333 ATAGTGACGACGTCTTTCATCTATCTCTCCTGCATTGTGCTGTTTGGGGCCTGCATTGAAGGCGTGGTCTTACG 1406
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1407 AGATAAGTTCGGGGAGGCCCTGCAGGGGAACCTGGTCATCGGCATGCTGGCCTGGCCCTCCCCCTGGGTCATCG 1480
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1481 TCATCGGCTCCTTCTTCTCCACCTGCGGTGCCGGCCTGCAGAGCCTCACGGGGGCACCGCGCCTACTGCAGGCC 1554
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1555 ATTGCCCGTGACGGCATCGTCCCCTTCCTGCAGGTGTTTGGCCACGGGAAGGCCAACGGGGAGCCCACGTGGGC 1628
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1629 GCTGCTGCTGACAGTCCTCATCTGCGAGACTGGCATCCTCATCGCCTCTCTGGACAGCGTGGCCCCGATCCTCT 1702
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1703 CCATGTTCTTCCTCATGTGCTACCTGTTCGTGAACCTGGCCTGCGCCGTGCAGACCCTGCTACGTACCCCCAAC 1776
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1777 TGGCGTCCACGCTTCAAGTTCTACCACTGGACCCTGTCCTTTCTGGGTATGAGCCTGTGCCTGGCGCTGATGTT 1850
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1851 CATCTGCTCCTGGTACTACGCGCTGTCCGCCATGCTCATCGCTGGCTGCATCTACAAGTACATCGAGTACCGCG 1924
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1925 GGGCCGAGAAGGAGTGGGGCGATGGCATCCGTGGCCTATCCCTGAACGCCGCCCGCTACGCCCTGCTGCGCGTG 1998
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1999 GAGCACGGTCCCCCCCACACCAAGAACTGGAGGCCCCAGGTGCTGGTGATGCTGAACCTGGACGCGGAGCAGGC 2072
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2073 CGTGAAGCACCCCCGCCTGCTGTCCTTCACGTCGCAGCTGAAGGCCGGCAAGGGCCTGACCATCGTGGGCTCGG 2146
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2147 TGCTGGAGGGGACGTACCTGGACAAGCACATGGAGGCTCAGCGGGCCGAGGAGAACATACGGTCCCTAATGAGC 2220
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2221 ACAGAGAAGACCAAGGGCTTCTGCCAGCTGGTGGTCTCGTCCAGCCTGCGGGATGGCATGTCCCACCTGATCCA 2294
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2295 GTCGGCCGGCCTGGGCGGCCTGAAGCACAACACGGTGCTCATGGCCTGGCCCGCATCCTGGAAGCAGGAGGACA 2368
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2369 ACCCCTTCTCCTGGAAGAACTTTGTGGACACCGTCCGCGACACCACCGCCGCGCACCAGGCTCTGCTGGTGGCC 2442
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2443 AAGAACGTCGACTCGTTTCCGCAAAACCAGGAGCGCTTCGGCGGGGGCCACATCGACGTGTGGTGGATCGTGCA 2516
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2517 CGACGGCGGCATGCTCATGCTGCTGCCCTTCCTGCTGCGCCAGCACAAGGTGTGGAGGAAGTGCCGGATGCGTA 2590
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2591 TCTTCACCGTGGCCCAGGTGGACGACAACAGCATCCAGATGAAGAAGGACCTGCAGATGTTCTTGTACCACTTG 2664
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2665 CGCATCAGCGCCGAGGTGGAGGTGGTGGAGATGGTTGAAAACGACATATCTGCTTTCACCTACGAGAGGACACT 2738
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2739 AATGATGGAGCAGAGGTCGCAGATGCTGAAGCAGATGCAGCTGTCCAAGAACGAGCAGGAGCGAGAGGCCCAGC 2812
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2813 TGATCCACGACAGGAACACCGCGTCCCACACCGCGGCGGCAGCCAGGACCCAAGCGCCGCCTACGCCAGACAAG 2886
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2887 GTGCAGATGACCTGGACCAGGGAGAAGCTGATCGCTGAGAAGTACAGGAGCAGAGACACCAGCCTATCTGGTTT 2960
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2961 CAAAGACCTCTTCAGCATGAAGCCAGAATGGGGAAACCTGGACCAGTCCAACGTCAGGCGGATGCACACGGCTG 3034
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3035 TGAAGCTCAATGGCGTCGTCCTCAACAAGTCCCAGGATGCGCAGCTGGTCCTGCTCAACATGCCAGGTCCTCCC 3108
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3109 AAAAACCGGCAGGGAGACGAGAACTACATGGAGTTTCTTGAAGTCCTGACCGAGGGGCTGAACAGAGTCCTCCT 3182
Query 799 ---------------------------------------- 798
Sbjct 3183 GGTCAGGGGTGGCGGCCGGGAGGTGATCACCATCTACTCC 3222
