Nucleotide Global Alignment
Description
- Query:
- TRCN0000466206
- Subject:
- XR_925580.2
- Aligned Length:
- 5620
- Identities:
- 764
- Gaps:
- 4834
Alignment
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 1 AGTCCCGTGGCGTCGGCGGGAGCGGCGCAGCGCGGGCCGGGCCGGGACGGGGACTGTCGGCTGCAGGCGGCCAT 74
Query 3 GCCCACCAACTTCACCGTGGTGCCCGTGGAGGCTCACGCCGACGGCGGCGGGGACGAGACTGCCGAGCGGACGG 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCCACCAACTTCACCGTGGTGCCCGTGGAGGCTCACGCCGACGGCGGCGGGGACGAGACTGCCGAGCGGACGG 148
Query 77 AGGCTCCGGGCACCCCCGAGGGCCCCGAGCCCGAGCGCCCCAGCCCGGGAGATGGAAATCCAAGAGAAAACAGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGCTCCGGGCACCCCCGAGGGCCCCGAGCCCGAGCGCCCCAGCCCGGGAGATGGAAATCCAAGAGAAAACAGC 222
Query 151 CCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGAACATGGCACTTTTCGAGGAGGA 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CCATTCCTCAACAATGTCGAGGTGGAACAAGAGAGCTTCTTTGAAGGGAAGAACATGGCACTTTTCGAGGAGGA 296
Query 225 GATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTACACCAACCTGAGCCAGGGCGTGG 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATGGACAGTAACCCCATGGTGTCCTCGCTGCTCAACAAGCTGGCCAACTACACCAACCTGAGCCAGGGCGTGG 370
Query 299 TGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCGCATGGGCACCTTCATCGGCGTC 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGAGCACGAGGAGGACGAGGAGAGCCGGCGGCGGGAGGCCAAGGCTCCGCGCATGGGCACCTTCATCGGCGTC 444
Query 373 TACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGACGTGGATCGTGGGGGTGGCTGG 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TACCTGCCGTGCCTGCAGAACATCCTGGGCGTCATCCTCTTCCTGCGCCTGACGTGGATCGTGGGGGTGGCTGG 518
Query 447 TGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTGACCGCCATTTCCATGAGTGCGA 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGTCCTGGAGTCCTTCCTCATCGTGGCCATGTGCTGCACATGTACAATGCTGACCGCCATTTCCATGAGTGCGA 592
Query 521 TCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCGCTCGCTGGGACCCGAGTTTGGA 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCGCTACCAACGGTGTGGTCCCAGCTGGCGGGTCCTACTACATGATATCGCGCTCGCTGGGACCCGAGTTTGGA 666
Query 595 GGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGTATATTTTGGGGACCATCGAGAT 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCGCTGTCGGCCTCTGCTTCTACCTGGGCACGACGTTTGCAGGGGCCATGTATATTTTGGGGACCATCGAGAT 740
Query 669 TTTTCTGA-----------------------------CAGGCACGGAGGACGGC--GTGGGCAGCCTGGGCCTG 711
|||||||| |||| |||||| |.|| ||||..||.| ||||
Sbjct 741 TTTTCTGACGTACATCTCCCCGGGTGCGGCCATCTTCCAGG--CGGAGG-CTGCAGGTGGCGAGGC--GGCC-- 807
Query 712 GGCTTG--GCCCAGGGAAACA--------GACGGCA----GACACACCTG-TC----CCCCAGTGAT------- 759
|.|.|| ||.| |||| .|||||| .||.|.|.|| || |||..|||.|
Sbjct 808 GCCATGCTGCAC-----AACATGCGTGTGTACGGCACGTGCACGCTCGTGCTCATGGCCCTGGTGGTCTTCGTG 876
Query 760 GCCGCC-----------CAAGCTGCCCATGG-------------------------------GGCTTTCTA--- 788
|.||.| |||||||.|..||| |||..||||
Sbjct 877 GGCGTCAAGTATGTCAACAAGCTGGCGCTGGTCTTCCTGGCCTGCGTCGTGCTGTCCATCCTGGCCATCTATGC 950
Query 789 CGG-------AAGT-----TTC---------------------------------------------------- 798
||| |||| |||
Sbjct 951 CGGCGTCATCAAGTCTGCCTTCGACCCCCCGGACATCCCGGTCTGCCTCCTGGGGAACCGCACGCTGTCACGGC 1024
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1025 GCAGCTTCGATGCCTGCGTCAAGGCCTACGGCATCCACAACAACTCAGCCACCTCCGCGCTCTGGGGCCTCTTC 1098
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1099 TGCAACGGCTCCCAGCCCAGCGCCGCCTGTGACGAGTACTTCATCCAGAACAACGTCACCGAAATCCAGGGCAT 1172
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1173 CCCGGGCGCGGCCAGTGGTGTCTTCCTGGAGAACCTGTGGAGTACGTACGCGCACGCGGGGGCGTTTGTGGAGA 1246
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1247 AGAAAGGTGTGCCCTCGGTGCCCGTGGCAGAGGAGAGCCGTGCCAGCGCACTGCCCTACGTGCTCACCGACATC 1320
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1321 GCGGCCTCCTTCACCCTGCTGGTTGGCATCTACTTCCCTTCCGTGACCGGTATCATGGCGGGTTCAAACCGGTC 1394
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1395 CGGGGACCTCAAGGATGCACAGAAGTCCATCCCCACGGGGACCATCCTGGCCATAGTGACGACGTCTTTCATCT 1468
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1469 ATCTCTCCTGCATTGTGCTGTTTGGGGCCTGCATTGAAGGCGTGGTCTTACGAGATAAGTTCGGGGAGGCCCTG 1542
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1543 CAGGGGAACCTGGTCATCGGCATGCTGGCCTGGCCCTCCCCCTGGGTCATCGTCATCGGCTCCTTCTTCTCCAC 1616
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1617 CTGCGGTGCCGGCCTGCAGAGCCTCACGGGGGCACCGCGCCTACTGCAGGCCATTGCCCGTGACGGCATCGTCC 1690
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1691 CCTTCCTGCAGGTGTTTGGCCACGGGAAGGCCAACGGGGAGCCCACGTGGGCGCTGCTGCTGACAGTCCTCATC 1764
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1765 TGCGAGACTGGCATCCTCATCGCCTCTCTGGACAGCGTGGCCCCGATCCTCTCCATGTTCTTCCTCATGTGCTA 1838
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1839 CCTGTTCGTGAACCTGGCCTGCGCCGTGCAGACCCTGCTACGTACCCCCAACTGGCGTCCACGCTTCAAGTTCT 1912
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1913 ACCACTGGACCCTGTCCTTTCTGGGTATGAGCCTGTGCCTGGCGCTGATGTTCATCTGCTCCTGGTACTACGCG 1986
Query 799 -------------------------------------------------------------------------- 798
Sbjct 1987 CTGTCCGCCATGCTCATCGCTGGCTGCATCTACAAGTACATCGAGTACCGCGGGGCCGAGAAGGAGTGGGGCGA 2060
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2061 TGGCATCCGTGGCCTATCCCTGAACGCCGCCCGCTACGCCCTGCTGCGCGTGGAGCACGGTCCCCCCCACACCA 2134
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2135 AGAACTGGAGGCCCCAGGTGCTGGTGATGCTGAACCTGGACGCGGAGCAGGCCGTGAAGCACCCCCGCCTGCTG 2208
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2209 TCCTTCACGTCGCAGCTGAAGGCCGGCAAGGGCCTGACCATCGTGGGCTCGGTGCTGGAGGGGACGTACCTGGA 2282
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2283 CAAGCACATGGAGGCTCAGCGGGCCGAGGAGAACATACGGTCCCTAATGAGCACAGAGAAGACCAAGGGCTTCT 2356
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2357 GCCAGCTGGTGGTCTCGTCCAGCCTGCGGGATGGCATGTCCCACCTGATCCAGTCGGCCGGCCTGGGCGGCCTG 2430
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2431 AAGCACAACACGGTGCTCATGGCCTGGCCCGCATCCTGGAAGCAGGAGGACAACCCCTTCTCCTGGAAGAACTT 2504
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2505 TGTGGACACCGTCCGCGACACCACCGCCGCGCACCAGGCTCTGCTGGTGGCCAAGAACGTCGACTCGTTTCCGC 2578
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2579 AAAACCAGGAGCGCTTCGGCGGGGGCCACATCGACGTGTGGTGGATCGTGCACGACGGCGGCATGCTCATGCTG 2652
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2653 CTGCCCTTCCTGCTGCGCCAGCACAAGGTGTGGAGGAAGTGCCGGATGCGTATCTTCACCGTGGCCCAGGTGGA 2726
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2727 CGACAACAGCATCCAGATGAAGAAGGACCTGCAGATGTTCTTGTACCACTTGCGCATCAGCGCCGAGGTGGAGG 2800
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2801 TGGTGGAGATGGACATCACAGAAAGCACAGAGCCCCGTGTGTTGCTTGTGGACACCTCGTGTAACACGGGTGTG 2874
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2875 GGTGTTGCCCTAGAGCCGGCATCAGCATCTCCGTGTCCTCCATGGTCCCGTGTCCTCCTCGGCCCGGGACCCCG 2948
Query 799 -------------------------------------------------------------------------- 798
Sbjct 2949 TCCAGGACCTCACACCTCAGTGGTGTTGCCATGGCCGAGGGCTGCAGGCCTGCGTGACGCTGGATGGTTTTCTG 3022
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3023 CCCAGTTTTGTACACTGGGCTTAGTTTCCATGTGGCTGTGTCTTCGGGGACGATGGCTGGAGTTTGTCTTGTTT 3096
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3097 GGACGAGGCTTTGCGGGTTCAAGGTTGAAAACGACATATCTGCTTTCACCTACGAGAGGACACTAATGATGGAG 3170
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3171 CAGAGGTCGCAGATGCTGAAGCAGATGCAGCTGTCCAAGAACGAGCAGGAGCGAGAGGCCCAGCTGATCCACGA 3244
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3245 CAGGAACACCGCGTCCCACACCGCGGCGGCAGCCAGGACCCAAGCGCCGCCTACGCCAGACAAGGTGCAGATGA 3318
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3319 CCTGGACCAGGGAGAAGCTGATCGCTGAGAAGTACAGGAGCAGAGACACCAGCCTATCTGGTTTCAAAGACCTC 3392
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3393 TTCAGCATGAAGCCGGACCAGTCCAACGTCAGGCGGATGCACACGGCTGTGAAGCTCAATGGCGTCGTCCTCAA 3466
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3467 CAAGTCCCAGGATGCGCAGCTGGTCCTGCTCAACATGCCAGGTCCTCCCAAAAACCGGCAGGGAGACGAGAACT 3540
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3541 ACATGGAGTTTCTTGAAGTCCTGACCGAGGGGCTGAACAGAGTCCTCCTGGTCAGGGGTGGCGGCCGGGAGGTG 3614
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3615 ATCACCATCTACTCCTAATGCCCAACAGCATCACGGCACTCTGGGACAGGCACGGAGGACGGCGTGGGCAGCCT 3688
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3689 GGGCCTGGGCTTGGCCCAGGGAAACAGACGGCAGACACACCTGTCCCCCAGTGATGCCGCCCAAGCTGCCCATG 3762
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3763 GGGCTTCCTACGGAAGTTTCTAGGCCCGTCACCTAGGGCTCTCCTGTTCAGCCTTAACAGGCTCAGCAAATCAG 3836
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3837 GGCGTGGCTGGACGATTTCCTTGCATCTGAGGGCAGACGCTGCTACCGGAGTGACCTGGACGTGGCCAGATCTT 3910
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3911 CTCGCAGGTCACAAGAAGCCAGTGAGCCCTTGCCTTGGTTTCTGGAAGTTCTTTTCCTTGGCTGGATTTACCCA 3984
Query 799 -------------------------------------------------------------------------- 798
Sbjct 3985 GTGGTTAGGTTGCATTTCTACCCCATCCAGAACATTCTTGGAAGAGCACCCGGAGCTGAAGCTGTCCCTGATGA 4058
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4059 TGAAGGTGAAACGTCAGCCCTGGCCATGGCTCCGCTCAGGGCCCCGGTCACCTCCGAGTCACTCTGTTCCTTGA 4132
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4133 CTGTCTTTGTGTTTCTGTACCTCAAGGCACTGAAGCTGGAGGACTCTGTCCATGCCCGTGTCACCCTCGTGTGG 4206
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4207 GAGCCTCTGGGCTCGGCAGGTCCACATTTCATGAGCTGAGGCGTGGGCCAGGGCCATCTGGAAAGGGAACTCGG 4280
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4281 CTTTTCCAGAACGTGGTGGATCATCTGTCGGGTGTGTGGTGAACACGTTCAGTTCATCAGGGCCTACGCTCCGG 4354
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4355 GAAGGGGCCCCCAGCTGTGGCTCTGCCATGCCGGGCTGTGTTTGCAGCTGTCCGAGTCTCCATCCACCTTTAGA 4428
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4429 AAACCAGCCACTTCTTTTCATAAGCACTGACAGGGCCCAGCCCACAGCCACAGGTGCGATCAGTGCCTCACGCA 4502
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4503 GGCAAATGCACTGAAACCCAGGGGCACACGCGCGCAGAGTGAACAGTGAGTTCCCCCGACAGCCCACGACAGCC 4576
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4577 AGGACTGCCCTCCCCACCCCACCCCACCCCAGGAGCACGGCACACAGTTCAGCCTCTGAGCTGGCTCACACGTG 4650
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4651 CCATCCCCACCCCGGTGCTCCAGGGAAGGAGGACACGGACCCGACGTGGGAGGTCCTCAGGCAGCAGTGGCGCC 4724
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4725 TGGTGTCAGGTCTGTCTGGCTGAGTCCCGGGCGTCCCCTGCCATGGCCTGTGCCTTGCATGGAGGCGGCGGTGG 4798
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4799 CACTGAAGAGATAGCTTTCAAGGGCCCAACACTTTGCACTTCGGCTGGCTGTGAGTTTCTGCTTTGTAGGTTGT 4872
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4873 GGTCACATTTGCAGGCTGCGGGCAGTGGCACCGACTTGGGCCTCCCTTTCTATGTGGCATATTTATTTATTTAA 4946
Query 799 -------------------------------------------------------------------------- 798
Sbjct 4947 ACACCCCAGGGAGTTACGTGGTAACAAGGTTGTCCATAAAGAGGTTGCTTCTATATACTAGAGGCCCCAGATGG 5020
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5021 CCAGGCCTTGGGCTACGTCTGGCTTGCATGGTCTCCCAAGGGAATCAGCCCCATCAACAAAGTTCAAATCGGGG 5094
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5095 CAGAGGCTGCACTTGTGCCCCCAGATGTTTCTGAGGAGCCAGACTAGGGCTGGCATTGCTGTAGAGTGACGGCT 5168
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5169 GCTGCCCAGAGCGTGTCCCAGACATCACAGCGGGGCTCAGCAGTTCCCACAGCCTCTGCCTGCCTTGGCTAAGC 5242
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5243 ATGAGTTAAGCAGCAAAACGCTCCTCCATGTCTGGATGGGGCCGGCAGGTCCTGTGTCCCCTGCACCTGGAGGA 5316
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5317 GAGCAGGCTAGAGGCACAGCGGCCACATGGTGCTGGCTCTGAACGTTGGTTGGTGGCTGGAAAACAGCCCTGCT 5390
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5391 TCTGAGGGCCGCTCAGTTCTGCACACGAAACCACCTCCTGAGGGCTCAGCTCTGCCCCCGCCCTGGGCTGCAGC 5464
Query 799 -------------------------------------------------------------------------- 798
Sbjct 5465 CTCTGCACGCAAGCACCAGGCATCCTTTGTGTTGTCAACTCCGTGTAACCAGTAACTACAGCCATTTACAATTG 5538
Query 799 ---------------------------------------------------------------------- 798
Sbjct 5539 ACTCCGTTTCCTTTTGTAGGTTTCCCTGTCTGTCTGTGTTAGTAGAAAAATAAAATCCTATGAAATCTGA 5608
