Nucleotide Global Alignment
Description
- Query:
- TRCN0000466223
- Subject:
- NM_001163643.1
- Aligned Length:
- 2703
- Identities:
- 1508
- Gaps:
- 1039
Alignment
Query 1 ATGGCTTGCCTCCATGAGACCCGAACACCCTCTCCTTCCTTTGGGGGCTTTGTGTCTACCCTAAGTGAGGCATC 74
|||||.|||||||||||.||||||||||||||.||||||||||||||||||||||||||.|||||||||||.||
Sbjct 1 ATGGCCTGCCTCCATGAAACCCGAACACCCTCCCCTTCCTTTGGGGGCTTTGTGTCTACTCTAAGTGAGGCTTC 74
Query 75 CATGCGCAAGCTGGACCCAGACACTTCTGACTGCACTCCCGAGAAGGACCTGACGCCTACCCAGTGTGTACTTC 148
.|||||.||||||||.|||||||||||.||||||||.||||||||.|||||||||||.|||||.||||||||||
Sbjct 75 TATGCGAAAGCTGGATCCAGACACTTCAGACTGCACCCCCGAGAAAGACCTGACGCCCACCCAATGTGTACTTC 148
Query 149 GAGATGTGGTACCCCTTGGTGGGCAGGGTGGGGGAGGGCCCAGCCCCTCCCCAGGTGGAGAGCCGCCCCCTGAG 222
|||||||.||.||.||.||||||||||||||.|||||.||||||||||||||||||||||||||.|||||.|||
Sbjct 149 GAGATGTTGTGCCTCTCGGTGGGCAGGGTGGAGGAGGACCCAGCCCCTCCCCAGGTGGAGAGCCTCCCCCAGAG 222
Query 223 CCTTTTGCCAACAGTGTCCTGCAGCTACATGAGCAGGATGCAGGGGGCCCAGGGGGAGCAGCTGGGTCACCTGA 296
|||||||||||.||||||||.||||||||||||||||||.||||.||.|||||||||||..|||||||||||||
Sbjct 223 CCTTTTGCCAATAGTGTCCTCCAGCTACATGAGCAGGATACAGGTGGGCCAGGGGGAGCCACTGGGTCACCTGA 296
Query 297 GAGTCGGGCATCCAGAGTTCGAGCTGACGAGGTGCGACTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAGGGCC 370
||||||.|||||.||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||.||.|
Sbjct 297 GAGTCGAGCATCTAGAGTTCGAGCTGATGAGGTACGTCTGCAGTGCCAGAGTGGCAGTGGCTTCCTTGAAGGTC 370
Query 371 TCTTTGGCTGCCTGCGCCCTGTCTGGACCATGATTGGCAAAGCCTACTCCACTGAGCACAAGCAGCAGCAGGAA 444
|.||||||||||||||||||||||||||.|||||||||||||||||||||||.||.||||||||.|||||||||
Sbjct 371 TTTTTGGCTGCCTGCGCCCTGTCTGGACAATGATTGGCAAAGCCTACTCCACAGAACACAAGCAACAGCAGGAA 444
Query 445 GACCTTTGGGAGGTCCCCTTTGAGGAAATCCTGGACCTGCAGTGGGTGGGCTCAGGGGCCCAGGGTGCTGTCTT 518
|||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||
Sbjct 445 GACCTTTGGGAAGTCCCCTTTGAGGAAATCCTGGACCTGCAGTGGGTAGGCTCAGGGGCTCAGGGTGCTGTTTT 518
Query 519 CCTGGGGCGCTTCCACGGGGAGGAGGTGGCTGTGAAGAAGGTGCGAGACCTCAAAGAAACCGACATCAAGCA-C 591
||||||.||||||||||||||||||||.||||||||||||||.|||||.|||||.||.||.||||||||||| |
Sbjct 519 CCTGGGACGCTTCCACGGGGAGGAGGTAGCTGTGAAGAAGGTTCGAGATCTCAAGGAGACTGACATCAAGCATC 592
Query 592 TTGCGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGGGTGTGTGCACCCAGGCTCCCTGCTACTGCATCCT 665
|| |||||||||||||||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||||
Sbjct 593 TT-CGAAAGCTGAAGCACCCCAACATCATCACTTTCAAGGGTGTTTGCACACAGGCCCCCTGCTACTGCATCCT 665
Query 666 CATGGAGTTCTGCGCCCAGGGCCAGCTGTATGAGGTACTGCGGGCTGGCCGCCCTGTCACCCCCTCCTTACTGG 739
.|||||.||||||||.||.||.|||||.||||||||.||..|.||.|||||||||||||||||||||||.||||
Sbjct 666 TATGGAATTCTGCGCTCAAGGACAGCTATATGAGGTGCTCAGAGCCGGCCGCCCTGTCACCCCCTCCTTGCTGG 739
Query 740 TTGACTGGTCCATGGGCATCGCTGGTGGCATGAACTACCTGCACCTGCACAAGATTATCCACAGGGATCTCAAG 813
||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||.||.|||
Sbjct 740 TTGACTGGTCCATGGGCATCGCTGGTGGCATGAATTACCTGCACCTGCACAAGATTATCCACAGAGACCTGAAG 813
Query 814 TCACCCAACATGCTAATCACCTACGACGATGTGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGA 887
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 TCACCCAACATGCTAATCACATACGACGATGTGGTGAAGATCTCAGATTTTGGCACTTCCAAGGAGCTGAGTGA 887
Query 888 CAAGAGCACCAAGATGTCCTTTGCAGGGACAGTAGCCTGGATGGCCCCTGAGGTGATCCGCAATGAACCTGTGT 961
|||||||||||||||||||||||||||.|||||||||||||||||.|||||.||||||.|.|||||||||||||
Sbjct 888 CAAGAGCACCAAGATGTCCTTTGCAGGAACAGTAGCCTGGATGGCTCCTGAAGTGATCAGAAATGAACCTGTGT 961
Query 962 CTGAGAAGGTCGACATCTGGTCCTTTGGCGTGGTGCTATGGGAACTGCTGACTGGTGAGATCCCCTACAAAGAC 1035
||||||||||.|||||||||||||||||.|||||||||||||||||.||||||||.|||||.|||||||||||.
Sbjct 962 CTGAGAAGGTTGACATCTGGTCCTTTGGGGTGGTGCTATGGGAACTACTGACTGGAGAGATTCCCTACAAAGAT 1035
Query 1036 GTAGATTCCTCAGCCATTATCTGGGGTGTGGGAAGCAACAGTCTCCATCTGCCCGTGCCCTCCAGTTGCCCAGA 1109
|||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||.||||||||.||||||||
Sbjct 1036 GTAGATTCCTCAGCCATCATCTGGGGTGTGGGAAGCAACAGTCTCCACCTGCCTGTACCCTCCAGCTGCCCAGA 1109
Query 1110 TGGTTTCAAGATCCTGCTTCGCCAGTGCTGGAATAGCAAACCACGAAATCGCCCATCATTCCGACAGATCCTGC 1183
||||||.||.||.||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||.|||
Sbjct 1110 TGGTTTTAAAATTCTACTTCGCCAGTGCTGGAACAGCAAACCACGAAATCGCCCATCATTCCGACAGATCTTGC 1183
Query 1184 TGCATCTGGACATTGCCTCAGCTGATGTACTCTCCACACCCCAGGAGACTTACTTTAAGTCCCAGGCAGAGTGG 1257
||||.||||||||.|||||.||||||||.|||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 1184 TGCACCTGGACATCGCCTCCGCTGATGTGCTCTCTACACCCCAGGAGACTTACTTTAAGTCCCAGGCAGAGTGG 1257
Query 1258 CGGGAAGAAGTAAAACTGCACTTTGAAAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACT 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CGGGAAGAAGTAAAACTGCACTTTGAAAAGATTAAGTCAGAAGGGACCTGTCTGCACCGCCTAGAAGAGGAACT 1331
Query 1332 GGTGATGAGGAGGAGGGAGGAGCTCAGACACGCCCTGGACATCAGGGAGCACTATGAAAGGAAGCTGGAGAGAG 1405
|||||||.||||.|||||||||||||||||.|||||||||||||||||||||||||||.|||||.|||||||||
Sbjct 1332 GGTGATGCGGAGAAGGGAGGAGCTCAGACATGCCCTGGACATCAGGGAGCACTATGAACGGAAGTTGGAGAGAG 1405
Query 1406 CCAACAACCTGTATATGGAACTTAATGCCCTCATGTTGCAGCTGGAACTCAAGGAGAGGGAGCTGCTCAGGCGA 1479
|||||||||||||.||||||||.||||||||||||.||||.||.||||||||.||||||||..|||||||||||
Sbjct 1406 CCAACAACCTGTACATGGAACTGAATGCCCTCATGCTGCAACTAGAACTCAAAGAGAGGGAATTGCTCAGGCGA 1479
Query 1480 GAGCAAGCTTTAGAGCGGAGGTGCCCAGGCCTGCTGAAGCCACACCCTTCCCGGGGCCCCCAGCTTCCCTCCCT 1553
|||||.||||||||..||.||||.||.||.||.||.|||.||||||||||.||||||| .|||
Sbjct 1480 GAGCAGGCTTTAGAAAGGCGGTGTCCTGGTCTACTAAAGTCACACCCTTCTCGGGGCC------------TCCT 1541
Query 1554 CCAT-GAAAGCCACTCGTATTCCTTGTA------CATAGAGAAA---TATTT---ATATAAATT---------- 1604
.||| |||| |||| .||.| |||..||||| .|..| |.|.|||.|
Sbjct 1542 ACATGGAAA--CACT--------ATGGAGAAGCTCATCAAGAAAAGGAACGTGCCACAGAAACTGTCGCCCCAC 1605
Query 1605 -------------ATATATATATATACATA--------TATATATA-TATATGC-GCCACATAATCAACAGAAA 1655
|||| |.|..|.|||.| ||..||.| ||.|||| |||..| ||...
Sbjct 1606 AGCAAAAGGCCAGATAT-TCTCAAGACAGAGTCGTTGCTACCTAAACTAGATGCAGCCCTA--------AGTGG 1670
Query 1656 GATGGGGC--------TGTCCCAGCCGTAAG---------TCAGGCTCGAGGGAGACTG-------ATCCCC-- 1703
|.|||||| ||||| |||| ||| .||.||.||||.|.| |..|||
Sbjct 1671 GGTGGGGCTTCCTGGGTGTCC------TAAGGGCCCCCCTTCA-CCTGGAAGGAGTCGGCGTGGCAAGACCCGT 1737
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 1738 CACCGAAAGGCCAGTGCCAAGGGCAGCTGTGGAGACCTGCCTGGGCTTCGTGCAGCTTTGCCACCCCATGAGCC 1811
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 1812 TGGAGGACTAGGAAGCCCAGGGGGCCTAGGAGTGGGCCCTTCAGCTTGGGATGCTTGCCCCCCTGCTCTCCGTG 1885
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 1886 GACTCCACCATGACCTTCTACTCCGAAAGATGTCATCATCATCCCCAGACCTGCTATCAGCAGCGCTGGGAGCC 1959
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 1960 CGAGGCCGAGGGGCTACAGGGGGAGCTCGGGATCCTGGCTCACCACCTCCACCCCAGGGCGATACTCCTCCAAG 2033
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 2034 TGAGGGATCAGCTCCTGGTTCCACCAGCCCAGATTCGCCTGGGGGAGCTAAAGGGGAACCCCCTCCACCAGTAG 2107
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 2108 GGCCTGGAGAAGGTGTGGGGCTGCTGGGAACTGGAAGGGAAGGGACTGCAGGCCGGGGAGGAAACCGGGCTGGG 2181
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 2182 TCCCAGCACTTGACCCCCGCTGCGCTGCTGTACAGGGCTGCTGTGACTCGAAGTCAGAAACGTGGTATCTCATC 2255
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 2256 TGAAGAAGAAGAAGGAGAGGTAGACAGTGAAGTAGAGCTACCCCCAAGTCAAAGGTGGCCTCAGGGCCCGAACA 2329
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 2330 TGCGTCAGTCACTATCTACATTCAGCTCAGAGAACCCATCAGATGTGGAGGAAGGTACAGCTAGTGAGCCTTCC 2403
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 2404 CCAAGTGGCACACCAGAAGTTGGCAGTACCAACACTGATGAGCGACCAGATGAACGATCTGATGACATGTGCTC 2477
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 2478 ACAGGGCTCAGAAATTCCACTGGACCTACCTACTTCAGAGGTGGTCCCTGAACGTGAAGCCAGCTCCTTGCCCA 2551
Query 1704 -------------------------------------------------------------------------- 1703
Sbjct 2552 TGCAACACCAGGATGGCCAGGGCCCCAATCCTGAAGACTCAGACTGTGACAGCACTGAATTGGACAACTCCAAC 2625
Query 1704 --------------------------------------- 1703
Sbjct 2626 AGCATTGATGCCTTGCGGCCCCCAGCCTCCCTTCCTCCA 2664
