Nucleotide Global Alignment
Description
- Query:
- TRCN0000466288
- Subject:
- XR_001779874.1
- Aligned Length:
- 2414
- Identities:
- 980
- Gaps:
- 1360
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CGCGCCTGCGCAGTGCGGCGCCTAGGGGGAACGCGAGAAGGAGACGGACGTTGAGAGAACGAGGAGGAAGGCGA 74
Query 1 ----ATGGCGTCCACGGATTACAGTACCTATAGCCAAGCTGCAGCGCAGCAGGGCTACAGTGCTTACACCGCCC 70
|||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||||||||
Sbjct 75 GAAAATGGCGTCCACGGATTACAGTACCTATAGTCAAGCTGCAGCCCAGCAGGGCTACAGTGCTTACACCGCCC 148
Query 71 AGCCCACTCAAGGATATGCACAGACCACCCAGGCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCCACT 144
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 149 AGCCAACTCAAGGATATGCACAGACCACCCAGGCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCTACT 222
Query 145 GATGTCAGCTATACCCAGGCTCAGACCACTGCAACCTATGGGCAGACCGCCTATGCAACTTCTTATGGACAGCC 218
||||||||||||||.|||||||||||||||||.|||||.||||||||.||.||||||||||||||.||||||||
Sbjct 223 GATGTCAGCTATACTCAGGCTCAGACCACTGCCACCTACGGGCAGACTGCATATGCAACTTCTTACGGACAGCC 296
Query 219 TCCCACT------------------GGTTATACTACTCCAACTGCCCCCCAGGCATACAGCCAGCCTGTCCAGG 274
||||||| |||||||..||||||||||||||.|||||.||||||||||||||.||||
Sbjct 297 TCCCACTGTAGAAGGGACCAGTACAGGTTATAGCACTCCAACTGCCCCGCAGGCGTACAGCCAGCCTGTGCAGG 370
Query 275 GGTATGGCACTGGTGCTTATGATACCACCACTGCTACAGTCACCACCACCCAGGCCTCCTATGCAGCTCAGTCT 348
|.|||||||||||..|||||||.|.|||||||||||||||||||||.||.||||||||.||.|||||||||.||
Sbjct 371 GATATGGCACTGGGACTTATGACAGCACCACTGCTACAGTCACCACAACGCAGGCCTCTTACGCAGCTCAGACT 444
Query 349 GCATATGGCACTCAGCCTGCTTATCCAGCCTATGGGCAGCAGCCAGCAGCCACTGCACCTACAAGACCGCAGGA 422
|||||||||||.||||||||.||.||..|||||||.|||||||||.|||||||.||||||||.|||||.|||||
Sbjct 445 GCATATGGCACCCAGCCTGCCTACCCCACCTATGGCCAGCAGCCAACAGCCACCGCACCTACCAGACCACAGGA 518
Query 423 TGGAAACAAGCCCACTGAGACTAGTCAACCTCAATCTAGCACAGGGGGTTACAACCAGCCCAGCCTAGGATATG 496
|||.||||||||..|||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||
Sbjct 519 TGGTAACAAGCCTGCTGAGACTAGTCAACCTCAATCTAGCACAGGGGGTTATAACCAACCCAGCCTAGGATATG 592
Query 497 GACAGAGTAACTACAGTTATCCCCAGGTACCTGGGAGCTACCCCATGCAGCCAGTCACTGCACCTCCATCCTAC 570
||||||||||||||||.||||||||||||||||||||||||||.||||||||||||||.|||||||||||.||.
Sbjct 593 GACAGAGTAACTACAGCTATCCCCAGGTACCTGGGAGCTACCCAATGCAGCCAGTCACCGCACCTCCATCTTAT 666
Query 571 CCTCCTACCAGCTATTCCTCTACACAGCCGACTAGTTATGATCAGAGCAGTTACTCTCAGCAGAACACCTATGG 644
||||||||||||||.||||||.||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 667 CCTCCTACCAGCTACTCCTCTTCACAGCCGACTAGTTACGATCAGAGCAGTTACTCTCAGCAGAACACCTATGG 740
Query 645 GCAACCGAGCAGCTATGGACAGCAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAGCAGCCTCCCACTAGTT 718
|||.|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 741 GCAGCCGAGCAGCTATGGACAACAGAGTAGCTATGGTCAACAAAGCAGCTATGGGCAGCAGCCTCCTACTAGTT 814
Query 719 ACCCACCCCAAACTGGATCCTACAGCCAAGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAG 792
||||.||.||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCCCCCTCAGACTGGATCCTACAGCCAGGCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAG 888
Query 793 AGTTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGACCAGG 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGTTCATTCCGACAGGACCACCCCAGTAGCATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGACCAGG 962
Query 867 AGAGAACCGGAGCATGAGTGGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCA 940
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGAGAACCGGAGCTTGAGTGGCCCTGATAACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCA 1036
Query 941 GAGGTGGGCGGGGAGGAGGACGCGGTGTAATGGGGTTACA------AAGTG---AGA-----------GCCTT- 993
|||||||||||||||||||||||||||.|.|||||...|| ||| | ||| |||||
Sbjct 1037 GAGGTGGGCGGGGAGGAGGACGCGGTGGACTGGGGACCCATGGATGAAG-GACCAGATCTTGATCTAGGCCTTC 1109
Query 994 GTAT-----------------------ACACTTCAAT------------ACTTAA-----AAAGTACCCGTACT 1027
.||| |||.|.|||| | |||| ||.|| .|||
Sbjct 1110 CTATAGATCCCGATGAAGACTCTGACAACAGTGCAATTTATGTGCAAGGA-TTAAATGACAATGT-----GACT 1177
Query 1028 CAGTACTCAGCCGGCAG-------------------------CATAATGAA-AAGTG----GGAC--------- 1062
|.|.| |.|.|.||||| ||..||||| |||.| ||||
Sbjct 1178 CTGGA-TGATCTGGCAGACTTCTTTAAGCAGTGTGGGGTTGTCAAGATGAACAAGAGAACTGGACAACCCATGA 1250
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1251 TCCATATCTACCTGGATAAGGAGACAGGAAAGCCTAAAGGGGACGCCACAGTGTCCTATGAAGATCCACCAACT 1324
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1325 GCAAAGGCTGCCGTGGAATGGTTTGATGGGAAAGATTTTCAAGGAAGCAAACTTAAAGTGTCTCTTGCCCGAAA 1398
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1399 GAAGCCTCCAATGAACAGCATGCGGGGAGGCATGCCACCTCGTGAGGGCAGGGGGATGCCACCACCACTTCGTG 1472
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1473 GAGGTCCTGGTGGCCCAGGAGGCCCTGGAGGACCCATGGGTCGCATGGGAGGCCGTGGAGGAGACAGAGGGGGC 1546
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1547 TTCCCTCCAAGAGGGCCCCGAGGCTCCAGAGGAAACCCCTCTGGAGGAGGAAATGTCCAGCACCGAGCTGGAGA 1620
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1621 CTGGCAGTGTCCCAATCCGGGCTGTGGAAACCAGAACTTCGCTTGGAGAACAGAATGCAACCAGTGTAAGGCCC 1694
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1695 CTAAGCCCGAGGGCTTCCTCCCGCCACCCTTTCCACCTCCGGGTGGTGATCGTGGACGAGGTGGCCCTGGTGGC 1768
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1769 ATGCGAGGAGGAAGAGGAGGACTCATGGACCGTGGTGGTCCTGGAGGAATGTTCAGAGGTGGCAGAGGTGGAGA 1842
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1843 CAGAGGAGGCTTCCGAGGTGGCCGTGGAATGGACCGAGGTGGCTTTGGTGGAGGAAGACGAGGTGGTCCTGGGG 1916
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1917 GGCCTCCTGGACCTTTAATGGAACAGATGGGAGGAAGAAGAGGCGGACGTGGAGGACCTGGGAAAATGGATAAA 1990
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1991 GGCGAGCACCGTCAGGAACGCAGAGACCGGCCCTACTAGAGACCTGCAGAGCTGCATTGACGACCAGATTTATT 2064
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2065 TTTTAAACCAGAAAATGTTTTAAATTTATAATTCCATATTTATAATGTTGGCGACAACATTATGATTATTCCTT 2138
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2139 GTCTGTACTTTAGTATTTTCACCATTTGTGAAGAAACATTAAAACAAGTTAAATAGTAGTGTGCTGAGTTTTTT 2212
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2213 TTTGTTGTTGTTGTTTTTTGATTTGTTCTTTTTTTTTTCCTTTTTAAGATGGTTGTTTTAAGACTTAACAATGG 2286
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2287 GAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTAATTGTAACAATGTTCATGGTT 2360
Query 1063 ---------------------------------------------- 1062
Sbjct 2361 GTGATTTTTTTTTTTAAATAAAATTCCAAATGTTTATAAACTGTCA 2406
