Nucleotide Global Alignment
Description
- Query:
- TRCN0000466288
- Subject:
- XR_002958676.1
- Aligned Length:
- 3820
- Identities:
- 1041
- Gaps:
- 2759
Alignment
Query 1 -------------------------------------------------------------------ATGGCGT 7
|||||||
Sbjct 1 AGTGCGGCGCCTAGAGGGAAAGCGAGAGGGAGACGGACGTTGAGAGAACGAGGAGGAAGGAGAGAAAATGGCGT 74
Query 8 CCACGGATTACAGTACCTATAGCCAAGCTGCAGCGCAGCAGGGCTACAGTGCTTACACCGCCCAGCCCACTCAA 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CCACGGATTACAGTACCTATAGCCAAGCTGCAGCGCAGCAGGGCTACAGTGCTTACACCGCCCAGCCCACTCAA 148
Query 82 GGATATGCACAGACCACCCAGGCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCCACTGATGTCAGCTA 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGATATGCACAGACCACCCAGGCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCCACTGATGTCAGCTA 222
Query 156 TACCCAGGCTCAGACCACTGCAACCTATGGGCAGACCGCCTATGCAACTTCTTATGGACAGCCTCCCACTGGTT 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TACCCAGGCTCAGACCACTGCAACCTATGGGCAGACCGCCTATGCAACTTCTTATGGACAGCCTCCCACTGGTT 296
Query 230 ATACTACTCCAACTGCCCCCCAGGCATACAGCCAGCCTGTCCAGGGGTATGGCACTGGTGCTTATGATACCACC 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATACTACTCCAACTGCCCCCCAGGCATACAGCCAGCCTGTCCAGGGGTATGGCACTGGTGCTTATGATACCACC 370
Query 304 ACTGCTACAGTCACCACCACCCAGGCCTCCTATGCAGCTCAGTCTGCATATGGCACTCAGCCTGCTTATCCAGC 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACTGCTACAGTCACCACCACCCAGGCCTCCTATGCAGCTCAGTCTGCATATGGCACTCAGCCTGCTTATCCAGC 444
Query 378 CTATGGGCAGCAGCCAGCAGCCACTGCACCTACAAGACCGCAGGATGGAAACAAGCCCACTGAGACTAGTCAAC 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTATGGGCAGCAGCCAGCAGCCACTGCACCTACAAGACCGCAGGATGGAAACAAGCCCACTGAGACTAGTCAAC 518
Query 452 CTCAATCTAGCACAGGGGGTTACAACCAGCCCAGCCTAGGATATGGACAGAGTAACTACAGTTATCCCCAGGTA 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCAATCTAGCACAGGGGGTTACAACCAGCCCAGCCTAGGATATGGACAGAGTAACTACAGTTATCCCCAGGTA 592
Query 526 CCTGGGAGCTACCCCATGCAGCCAGTCACTGCACCTCCATCCTACCCTCCTACCAGCTATTCCTCTACACAGCC 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTGGGAGCTACCCCATGCAGCCAGTCACTGCACCTCCATCCTACCCTCCTACCAGCTATTCCTCTACACAGCC 666
Query 600 GACTAGTTATGATCAGAGCAGTTACTCTCAGCAGAACACCTATGGGCAACCGAGCAGCTATGGACAGCAGAGTA 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GACTAGTTATGATCAGAGCAGTTACTCTCAGCAGAACACCTATGGGCAACCGAGCAGCTATGGACAGCAGAGTA 740
Query 674 GCTATGGTCAACAAAGCAGCTATGGGCAGCAGCCTCCCACTAGTTACCCACCCCAAACTGGATCCTACAGCCAA 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCTATGGTCAACAAAGCAGCTATGGGCAGCAGCCTCCCACTAGTTACCCACCCCAAACTGGATCCTACAGCCAA 814
Query 748 GCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAGAGTTCATTCCGACAGGACCACCCCAGTAG 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCTCCAAGTCAATATAGCCAACAGAGCAGCAGCTACGGGCAGCAGAGTTCATTCCGACAGGACCACCCCAGTAG 888
Query 822 CATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGACCAGGAGAGAACCGGAGCATGAGTGGCCCTGATA 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CATGGGTGTTTATGGGCAGGAGTCTGGAGGATTTTCCGGACCAGGAGAGAACCGGAGCATGAGTGGCCCTGATA 962
Query 896 ACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGAGGTGGGCGGGGAGGAGGACGCGGTGTA 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 963 ACCGGGGCAGGGGAAGAGGGGGATTTGATCGTGGAGGCATGAGCAGAGGTGGGCGGGGAGGAGGACGCGGTGGA 1036
Query 970 ATGGGGTTACA------AAGTG---AGAGC--------------CTTGT--ATACACTTCAATACT-TAAAAA- 1016
||||||...|| ||| | |||.| |.||| ||.||..|.||.||| |.|.||
Sbjct 1037 ATGGGGACCCATGGATGAAG-GACCAGATCTTGATCTAGGCCCACCTGTAGATCCAGATGAAGACTCTGACAAC 1109
Query 1017 ------------GTACCCGTACT------CAGT---ACTC------AGCCGGC-----------AGCA------ 1046
||||..|.|.| |||| |||| |.|.||| ||||
Sbjct 1110 AGTGCAATTTATGTACAAGGATTAAATGACAGTGTGACTCTAGATGATCTGGCAGACTTCTTTAAGCAGTGTGG 1183
Query 1047 ------TA--ATGAA------AAGTGGG--AC------------------------------------------ 1062
|| ||||| ||.|||| ||
Sbjct 1184 GGTTGTTAAGATGAACAAGAGAACTGGGCAACCCATGATCCACATCTACCTGGACAAGGAAACAGGAAAGCCCA 1257
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1258 AAGGCGATGCCACAGTGTCCTATGAAGACCCACCCACTGCCAAGGCTGCCGTGGAATGGTTTGATGGTGAGATG 1331
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1332 TACTCACTGGCATTCTTAATCTCCCTGGCTATAGAATATGGCATGAGGGAGAAACTTGTGAACCATAGGAGCAA 1405
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1406 GAAGACCTTCCATCTCTTCCTGGGGGAGGTAGATGGCCGGTCTCCCTGCAGTAGTAGTAGCACCCAGCCATTGA 1479
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1480 CCCTGGATTTGGAGATCCCTTTATTTTGAGGCATTAGTATTACAAATCAACCTTGCTTAAAGTGGCAAACACTT 1553
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1554 CCTAAGCACAGATTATCAGAAGGTACAGAAAACCCTTCAAAAGAACATCTTAGCCAGTGTACATTTGCATATAG 1627
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1628 ATAAATATATATATTTAAATGAGGCCTTGACATTAATGGTGGGATTTCACTTCAGACAAAACCAACTTGAAAGC 1701
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1702 ATTGAATGACTTGGCCATGTCCAGTGGCTTGCACCTGTAATCCCAGCACTTTGGGAGGCCAACATCGGTGCATT 1775
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1776 GCTTGAATCCAGGGGCTTGAGACCAGCCTGGGGAACATGGCAAAACCCTGTCTCTACAAAAAAAATACAAAAAT 1849
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1850 TAGCCAGGTGTTGTGGCACACTCCTATACCTATAGTACCAGCCACTCAGGAGGCTGAGGTGGGAGGATCACTTG 1923
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1924 AGCCCGGAGAGTTTGAAGCTCCAGTGAGCTGAGATTGCACCACTGCACTCCAACCTGGGCAACGGAGCAAGACT 1997
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1998 CTGTCTCAAAGAAAGTGTCAAATAACAAGTCCTGGTTCTGTTTTCTTGGTCATGCAGTCAGCTTCCCACCAGCT 2071
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2072 TATTTTCCTCCTTATGGTAGACAGTGTTTTTTGCTTGTGTTGTTTTTTTTGAGATGGTCTCACTTTGTCACCCA 2145
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2146 GGCTGGAGTGCAGTGACACAAGCCATCTCAGCTTACTGCAACCTCCACCTCCCAGGTTCAAGCCAATCTTGTGC 2219
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2220 GTCAGCCACTCGAGTAGCTGCTGGACTACAGGCGCATGTCACCACGCTGAGCCTAACTTTTGTATTTTTTAGTA 2293
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2294 GAGATGGGGTTTCACCATGTTGGTCAGGCTGTAGGAAGGTTTTTAAGTGTATTTAAGTATGGCCTTTTTCTGGC 2367
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2368 CAGGCACAGTGGCTCTTGCCTATAATCCTACCACTTCAGGAGGCCAAGGCAGGAGGATTGTTTGAACCAAGGAG 2441
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2442 TTCACTAGCAGCCTGGGCAACCTAGTGAGACACTGCCTCTACAAACAATTTTGTAAAATTAGTCGGGCATGGTG 2515
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2516 ATGCGTGCCTGTAGTCCCAGCTACTTGGGAGGATTGCTTGAGCAAGTGAGATTGAAACTGCAGTGAGCTGTGCC 2589
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2590 ACTGCACTCCAGCCCGGGCAACAGAGTGAGACTCCCATCTCAAAAAAAGCCTTTTTCTGGCCTTGTCATTAAAG 2663
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2664 ATCTTAGAGAAGATTACAGGCAGACCTAATGCATCTGGGAGTGGTCATTTGATGATGATGTGGAGTTGGTGAAC 2737
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2738 AGGGAGTACAGGGGAGTAATTGATGTTCTGTTGTCTTGTTCCAGGGAAAGATTTTCAAGGGAGCAAACTTAAAG 2811
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2812 TCTCCCTTGCTCGGAAGAAGCCTCCAATGAACAGTATGCGGGGTGGTCTGCCACCCCGTGAGGGCAGAGGCATG 2885
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2886 CCACCACCACTCCGTGGAGGTCCAGGAGGCCCAGGAGGTCCTGGGGGACCCATGGGTCGCATGGGAGGCCGTGG 2959
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2960 AGGAGATAGAGGAGGCTTCCCTCCAAGAGGACCCCGGGGTTCCCGAGGGAACCCCTCTGGAGGAGGAAACGTCC 3033
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3034 AGCACCGAGCTGGAGACTGGCAGTGTCCCAATCCGGGTTGTGGAAACCAGAACTTCGCCTGGAGAACAGAGTGC 3107
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3108 AACCAGTGTAAGGCCCCAAAGCCTGAAGGCTTCCTCCCGCCACCCTTTCCGCCCCCGGGTGGTGATCGTGGCAG 3181
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3182 AGGTGGCCCTGGTGGCATGCGGGGAGGAAGAGGTGGCCTCATGGATCGTGGTGGTCCCGGTGGAATGTTCAGAG 3255
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3256 GTGGCCGTGGTGGAGACAGAGGTGGCTTCCGTGGTGGCCGGGGCATGGACCGAGGTGGCTTTGGTGGAGGAAGA 3329
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3330 CGAGGTGGCCCTGGGGGGCCCCCTGGACCTTTGATGGAACAGATGGGAGGAAGAAGAGGAGGACGTGGAGGACC 3403
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3404 TGGAAAAATGGATAAAGGCGAGCACCGTCAGGAGCGCAGAGATCGGCCCTACTAGATGCAGAGACCCCGCAGAG 3477
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3478 CTGCATTGACTACCAGATTTATTTTTTAAACCAGAAAATGTTTTAAATTTATAATTCCATATTTATAATGTTGG 3551
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3552 CCACAACATTATGATTATTCCTTGTCTGTACTTTAGTATTTTTCACCATTTGTGAAGAAACATTAAAACAAGTT 3625
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3626 AAATGGTAGTGTGCGGAGTTTTTTTTTCTTCCTTCTTTTAAAAATGGTTGTTTAAGACTTTAACAATGGGAACC 3699
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 3700 CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGTGA 3773
Query 1063 ---------------------------------------------- 1062
Sbjct 3774 TGTTTTTTTTTTTTTTTTAAATAAAATTCCAAATGTTTATAAAGAG 3819
