Nucleotide Global Alignment
Description
- Query:
- TRCN0000466300
- Subject:
- XM_006522624.1
- Aligned Length:
- 2361
- Identities:
- 1034
- Gaps:
- 1176
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGAGCCGGGCGCCGCTGAGAGCCGCGCGCAGCCCCCAGGGTCCCGGAGGCCCGGCCGCGCCCGCCGCCAC 74
Query 1 -------------------------------------ATGCCT-----------CTGTTCCTC----------C 16
.|.||| ||..||||| |
Sbjct 75 CGGCCGGGCCGCGCTGCCCAGCGCCGGCTGCTGTCCCCTCCCTCCTGGCCGCAACTCCTCCTCCAGGCCTCGAC 148
Query 17 TGCTCTTACTTGTCCTGCTGCTGCTGCTCGAGGACGCTGGAGCCCAGCAAGGTGATGGATGTGGACACACTGTA 90
||||| |||.|.|||||.||.||||||.||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 149 TGCTC---CTTCTGCTGCTCCTACTGCTCCAGGACGCTGGAGGCCAGCAAGGTGATGGATGTGGACACACTGTA 219
Query 91 CTAGGCCCTGAGAGTGGAACCCTTACATCCATAAACTACCCACAGACCTATCCCAACAGCACTGTTTGTGAATG 164
||||||||||||||||||||||||||||||||.|||||||||||.||||||||.|||||||||||.||||||||
Sbjct 220 CTAGGCCCTGAGAGTGGAACCCTTACATCCATCAACTACCCACATACCTATCCTAACAGCACTGTGTGTGAATG 293
Query 165 GGAGATCCGTGTAAAGATGGGAGAGAGAGTTCGCATCAAATTTGGTGACTTTGACATTGAAGATTCTGATTCTT 238
||||||.||.||.|.||.||||||.||..|||||||||||||.||||||||||||||||||||||||||||.||
Sbjct 294 GGAGATTCGAGTCAGGACGGGAGAAAGGATTCGCATCAAATTCGGTGACTTTGACATTGAAGATTCTGATTATT 367
Query 239 GTCACTTTAATTACTTGAGAATTTATAATGGAATTGGAGTCAGCAGAACTGAAATAGGCAAATACTGTGGTCTG 312
|||||.||||||||.|||.|||.|.||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 368 GTCACCTTAATTACCTGAAAATCTTTAATGGAATTGGAGTCAGCAGAACGGAAATAGGCAAATACTGTGGTCTG 441
Query 313 GGGTTGCAAATGAACCATTCAATTGAATCAAAAGGCAATGAAATCACATTGCTGTTCATGAGTGGAATCCATGT 386
||.||.||||||||.||.||||||||.||.|||||||.||||.|||||.||||||||||||||||||.|||||.
Sbjct 442 GGTTTACAAATGAATCAGTCAATTGAGTCCAAAGGCAGTGAAGTCACAGTGCTGTTCATGAGTGGAACCCATGC 515
Query 387 TTCTGGACGCGGATTTTTGGCCTCATACTCTGTTATAGATAAACAAGATCTAATTACTTGTTTGGACACTGCAT 460
|.||||.||.|||||||||||.||||||||.||||||||||||.|||||.||||.|||||||||||.||||.||
Sbjct 516 TGCTGGGCGAGGATTTTTGGCTTCATACTCAGTTATAGATAAAGAAGATTTAATCACTTGTTTGGATACTGTAT 589
Query 461 CCAATTTTTTGGAACCTGAGTTCAGTAAGTACTGCCCAGCTGGTTGTCTGCTTCCTTTTGCTGAGATATCTGGA 534
|.||||||||||||||.||||||||||||||||||||||||||.|||||..|.|||||||||||.|||||||||
Sbjct 590 CTAATTTTTTGGAACCAGAGTTCAGTAAGTACTGCCCAGCTGGCTGTCTTTTGCCTTTTGCTGAAATATCTGGA 663
Query 535 ACAATTCCTCATGGATATAGAGATTCCTCGCCATTGTGCATGGCTGGTGTGCATGCAGGAGTAGTGTCAAACAC 608
|||||||||||||||||.||||||||.||.||||||||.||||||||..|.|||||||||||||||||||||..
Sbjct 664 ACAATTCCTCATGGATACAGAGATTCTTCACCATTGTGTATGGCTGGAATCCATGCAGGAGTAGTGTCAAACGT 737
Query 609 GTTGGGCGGCCAAATCAGTGTTGTAATTAGTAAAGGTATCCCCTATTATGAAAGTTCTTTGGCTAACAACGTCA 682
|.||||.|||||||||||..||||.|||||.|||||.|.|||.|||||||||||.||||||||.|||||.||||
Sbjct 738 GCTGGGTGGCCAAATCAGCATTGTGATTAGCAAAGGGACCCCATATTATGAAAGCTCTTTGGCCAACAATGTCA 811
Query 683 CATCTGTGGTGGGACACTTATCTACAAGTCTTTTTACATTTAAGACAAGTGGATGTTATGGAACACTGGGGATG 756
|.||...|||||||.||||||||.|||||||.||||||||||||||||||||.||.|||||.||.|||||||||
Sbjct 812 CTTCCACGGTGGGATACTTATCTGCAAGTCTGTTTACATTTAAGACAAGTGGTTGCTATGGGACTCTGGGGATG 885
Query 757 GAGTCTGGTGTGATCGCGGATCCTCAAATAACAGCATCATCTGTGCTGGAGTGGACTGACCACACAGGGCAAGA 830
||||||||||||||.||.|||||.||.|||||||||||.||||..|||||||||||||||||||..|||||.||
Sbjct 886 GAGTCTGGTGTGATTGCCGATCCCCAGATAACAGCATCGTCTGCACTGGAGTGGACTGACCACATGGGGCAGGA 959
Query 831 GAACAGTTGGAAACCCAAAAAAGCCAGGCTGAAAAAACCTGGACCGCCTTGGGCTGCTTTTGCCACTGATGAAT 904
||||||.||||.|.|..|.||.||||||||||.||||||.||.||.||.|||||||||||||||||||||||..
Sbjct 960 GAACAGCTGGACAGCGGAGAAGGCCAGGCTGAGAAAACCCGGGCCTCCCTGGGCTGCTTTTGCCACTGATGAGC 1033
Query 905 ACCAGTGGTTACAAATAGATTTGAATAAGGAAAAGAAAATAACAGGCATTATAACCACTGGATCCACCATGGTG 978
|.||||||.|.||.|||||..|.||.|||||.|||||.||||||||.||..||||||||||.||.||||||.|.
Sbjct 1034 ATCAGTGGCTGCAGATAGACCTTAACAAGGAGAAGAAGATAACAGGTATCGTAACCACTGGGTCTACCATGATA 1107
Query 979 GAGCACAATTACTATGTGTCTGCCTACAGAATCCTGTACAGTGATGATGGGCAGAAATGGACTGTGTACAGAGA 1052
||.||||.||||||||||||||||||||||.|||||||||||||.||||||||||.||||||||||||||||||
Sbjct 1108 GAACACAGTTACTATGTGTCTGCCTACAGAGTCCTGTACAGTGACGATGGGCAGAGATGGACTGTGTACAGAGA 1181
Query 1053 GCCTGGTGTGGAGCAAGATAAGATATTTCAAGGAAACAAAGATTATCACCAGGATGTGCGTAATAACTTTTTGC 1126
.|||||||||| |||||||
Sbjct 1182 ACCTGGTGTGG------------------------------------ACCAGGA-------------------- 1199
Query 1127 CACCAATTATTGCACGTTTTATTAGAGTGAATCCTACCCAATGGCAGCAGAAAATTGCCATGAAAATGGAGCTG 1200
|| ||||||||.|||..|||.|||||.||||||||||||||||||.||||.|||
Sbjct 1200 CA---------------------AGAGTGAACCCTGTCCAGTGGCAACAGAAAATTGCCATGAAAGTGGAACTG 1252
Query 1201 CTCGGATGTCAGTTTATTCCTAAAGGTCGTCCTCCAAAACTTACTCAACCTCCACCTCCTCGGAACAGCAATGA 1274
||||||||||||||||.||..||||||||.|.||||||.|||| |||||||||||||||||.||||
Sbjct 1253 CTCGGATGTCAGTTTACTCTCAAAGGTCGCCTTCCAAAGCTTA------CTCCACCTCCTCGGAACGGCAA--- 1317
Query 1275 CCTCAAAAACACTACAGCCCCTCCAAAAATAGCCAAAGGTCGTGCCCCAAAATTTACGCAACCACTACAACCTC 1348
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1349 GCAGTAGCAATGAATTTCCTGCACAGACAGAACAAACAACTGCCAGTCCTGATATCAGAAATACTACCGTAACT 1422
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1423 CCAAATGTAACCAAAGATGTAGCGCTGGCTGCAGTTCTTGTCCCTGTGCTGGTCATGGTCCTCACTACTCTCAT 1496
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1497 TCTCATATTAGTGTGTGCTTGGCACTGGAGAAACAGAAAGAAAAAAACTGAAGGCACCTATGACTTACCTTACT 1570
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1571 GGGACCGGGCAGGTTTTTATTTAATGGTCTCTTTGGCTTGCCGTCACAATGAAGGTTGGTGGAAAGGAATGAAG 1644
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1645 CAGTTTCTTCCTGCAAAAGCAGTGGACCATGAGGAAACCCCAGTTCGCTATAGCAGCAGTGAAGTTAATCACCT 1718
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1719 GAGTCCAAGAGAAGTCACCACAGTGCTGCAGGCTGACTCTGCAGAGTATGCTCAGCCACTGGTAGGAGGAATTG 1792
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1793 TTGGTACACTTCATCAAAGATCTACCTTTAAACCAGAAGAAGGAAAAGAAGCAGGCTATGCAGACCTAGATCCT 1866
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1867 TACAACTCACCAGGGCAGGAAGTTTATCATGCCTATGCTGAACCACTCCCAATTACGGGGCCTGAGTATGCAAC 1940
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 1941 CCCAATCATCATGGACATGTCAGGGCACCCCACAACTTCAGTTGGTCAGCCCTCCACATCCACTTTCAAGGCTA 2014
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 2015 CGGGGAACCAACCTCCCCCACTAGTGGGAACTTACAATACACTTCTCTCCAGGACTGACAGCTGCTCCTCAGCC 2088
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 2089 CAGGCCCAGTATGATACCCCGAAAGCTGGGAAGCCAGGTCTACCTGCCCCAGACGAATTGGTGTACCAGGTGCC 2162
Sbjct 1318 -------------------------------------------------------------------------- 1317
Query 2163 ACAGAGCACACAAGAAGTATCAGGAGCAGGAAGGGATGGGGAATGTGATGTTTTTAAAGAAATCCTT 2229
Sbjct 1318 ------------------------------------------------------------------- 1317
