Nucleotide Global Alignment
Description
- Query:
- TRCN0000466306
- Subject:
- XR_871695.2
- Aligned Length:
- 3255
- Identities:
- 1130
- Gaps:
- 1999
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCCGCCCCGCTCGCGCGCCTGAGGGCGGGCCTCCGGTCACATGACGGCTGCGCAGGTGAGCACCGCTTCCGGG 74
Query 1 ----------------------------------------------------------ATGGCGTCCTCCTCGG 16
||||||||||||||.|
Sbjct 75 TCGGGCTTCGGAGTCGCGGCTAGCTCCCGCTTCCACTCGCTCGGGTGCGCGGGAGACTATGGCGTCCTCCTCCG 148
Query 17 TCCCACCAGCCACGGTATCGGCGGCGACAGCAGGCCCCGGCCCAGGTTTCGGCTTCGCCTCCAAGACCAAGAAG 90
||||.||.|||||.|.|.|.|||||..|.|.||||||||||||.||.|||||||||||||||||.|||||||||
Sbjct 149 TCCCTCCCGCCACCGCACCCGCGGCAGCTGGAGGCCCCGGCCCGGGATTCGGCTTCGCCTCCAAAACCAAGAAG 222
Query 91 AAGCATTTCGTGCAGCAGAAGGTGAAGGTGTTCCGGGCGGCCGACCCGCTGGTGGGTGTGTTCCTGTGGGGCGT 164
|||||||||||.||||||||.|||||||||||||||||.||.||||||||||||||.|||||||||||||||||
Sbjct 223 AAGCATTTCGTACAGCAGAAAGTGAAGGTGTTCCGGGCCGCGGACCCGCTGGTGGGCGTGTTCCTGTGGGGCGT 296
Query 165 AGCCCACTC----------------------------------------------------------------- 173
.||.|||||
Sbjct 297 CGCTCACTCGGTCCAGCCCCAGGCTACAGGGACTGGCCAGGATCCGGCTGCAGCCAGAGGGACATTAAGGGGAG 370
Query 174 ------------------GATCAATGAGCTCAGCCAGGTGCCTCCCCCGGTGATGCTGCTGCCAGATGACTTTA 229
|||||||||||||||||||||.||.|||||.||||||.||||||||||||||||||
Sbjct 371 TGGCTCTGAAGGGTTATTGATCAATGAGCTCAGCCAGGTACCGCCCCCAGTGATGTTGCTGCCAGATGACTTTA 444
Query 230 AGGCCAGCTCCAAGATCAAGGTCAACAATCACCTTTTCCACAGGGAAAATCTGCCCAGTCATTTCAAGTTCAAG 303
|.||||||||||||||||||||||||||||||.|||||||.||.||||||||.|||||||||||||||||||||
Sbjct 445 AAGCCAGCTCCAAGATCAAGGTCAACAATCACTTTTTCCATAGAGAAAATCTTCCCAGTCATTTCAAGTTCAAG 518
Query 304 GAGTATTGTCCCCAGGTCTTCAGGAACCTCCGTGATCGATTTGGCATTGATGACCAAGATTACTTGGTGTCCCT 377
|||||||||||||||||||||||||||||..|.|||||.||||.|||.|||||.||.|||||||||||||||||
Sbjct 519 GAGTATTGTCCCCAGGTCTTCAGGAACCTGAGAGATCGGTTTGCCATCGATGATCACGATTACTTGGTGTCCCT 592
Query 378 TACCCGAAACCCCCCCAGCGAAAGTGAAGGCAGTGATGGTCGCTTCCTTATCTCCTACGATCGGACTCTGGTCA 451
|||.||||.||||||.|||||||.|||||||||||||||.||.||||||||||||||.||.||.||||||||||
Sbjct 593 TACTCGAAGCCCCCCAAGCGAAACTGAAGGCAGTGATGGCCGTTTCCTTATCTCCTATGACCGCACTCTGGTCA 666
Query 452 TCAAAGAAGTATCCAGTGAGNACATTGNTGACATNCATAGCAACNTNNCCAACTATCACCAGTACATTGTGAAG 525
||||.|||||.||.||.||..|.||||..||.||.||.||||||.|..|||||||.|||||||||||.|||||.
Sbjct 667 TCAAGGAAGTGTCGAGCGAAGATATTGCGGATATGCACAGCAACCTCTCCAACTACCACCAGTACATAGTGAAA 740
Query 526 TGCCATGGCAACACGCNTNTGCCCCAGTTCNTGGGGATGTACCGAGTCAGTGTGGACAACGAAGACAGCTACAT 599
||.|||||||||||||.|.|||||||||||.||||.|||||||||||||||||.||.||.||||||||||||||
Sbjct 741 TGTCATGGCAACACGCTTCTGCCCCAGTTCCTGGGCATGTACCGAGTCAGTGTAGAAAATGAAGACAGCTACAT 814
Query 600 GCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGT 673
|||.||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||.|||||||
Sbjct 815 GCTCGTGATGCGCAATATGTTTAGTCATCGTCTTCCTGTGCATAGGAAGTATGACCTCAAGGGCTCTCTAGTGT 888
Query 674 CCCGGGAAGCCAGCGATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAANGATATGGACTTTCTCAACAAGAAC 747
|||||||||||||||||||||||||||||||||||.||||.||.||.||.||||||||||||||.|||||||||
Sbjct 889 CCCGGGAAGCCAGCGATAAGGAAAAGGTTAAAGAACTGCCAACACTAAAGGATATGGACTTTCTTAACAAGAAC 962
Query 748 CAGAAAGTATATATTGGTGANNNGNAGAAGAAAA-----TATTTCTGGAGAAGCTGAA--GAAGNNGATGTGGA 814
||||||||.||||||||||| ||||||||| ||||.|||||||||||||| || ||||||||
Sbjct 963 CAGAAAGTGTATATTGGTGA-----AGAAGAAAAGAAAGTATTCCTGGAGAAGCTGAAGCGA----GATGTGGA 1027
Query 815 GTTTCTAGTGCAGCTGAAGATCATGGACTACAGCCTTCTGCTAGGCATCCACGACATCATTCGGGGCTCTGAAC 888
||||||||||||||||||||||||||||||||||||.|||.|.|||||||||||||||||.|||||||||||||
Sbjct 1028 GTTTCTAGTGCAGCTGAAGATCATGGACTACAGCCTCCTGTTGGGCATCCACGACATCATCCGGGGCTCTGAAC 1101
Query 889 CAGAGGAGGAAGCGCCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGACTGCAGCCTGACTGGACCTCCTGCT 962
|.|||||.||.|.|||.|||.|||||||.|||||.|||..||||||||||||.|.||||.||||||||||.||.
Sbjct 1102 CCGAGGAAGAGGGGCCTGTGAGGGAGGAGGAGTCTGAGTGGGATGGGGACTGTAACCTGGCTGGACCTCCCGCC 1175
Query 963 CTGGTGGGCTCCTATGGCACCTCCCCAGAGGGTATCGGAGGCTACATCCATTCCCATCGGCCCCTGGGCCCAGG 1036
|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|||||.|||||||||||
Sbjct 1176 CTGGTGGGCTCCTATGGTACCTCCCCTGAGGGTATCGGAGGCTACATCCATTCCCACCGGCCACTGGGCCCAGG 1249
Query 1037 AGAGTTTGAGTCCTTCATTGATGTCTATGCCATCCGGAGTGCTGAAGGAGCCCCCCAGAAGGAGGTCTACTTCA 1110
||||||||||||||||||.|||||||||||.|||||||||||.||.||.|||||||||||||||||.||.||||
Sbjct 1250 AGAGTTTGAGTCCTTCATCGATGTCTATGCTATCCGGAGTGCGGAGGGGGCCCCCCAGAAGGAGGTGTATTTCA 1323
Query 1111 TGGGCCTCATTGATATCCTTACACAGTATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAAACTGTCAAGCA- 1183
|||||||||||||.||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1324 TGGGCCTCATTGACATTCTGACACAGTATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAGACTGTCAAGCAC 1397
Query 1184 ---------------------------------------------------------------TGGGGCTGGGG 1194
||||||.||||
Sbjct 1398 GGGGTGAGGGTTCCCCACAGCCTTTCCTCTCCTGGCCTGACTGTTCTCTGGAAAGAACGCTTCTGGGGCGGGGG 1471
Query 1195 CAGAGATCTCTACTGTCCATCCGGAGCAGTATGCTAAGCGATTCCTGGATTTTATTACCAACATCTTTGCC--- 1265
||||||||||.|||||||||||.||||||||||||||||||||||||||.||||||.||||||||||||||
Sbjct 1472 CAGAGATCTCCACTGTCCATCCTGAGCAGTATGCTAAGCGATTCCTGGACTTTATTGCCAACATCTTTGCCTAA 1545
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 1546 GAGGCTGCCTGACTCCAGGGAGGAGCTGGGGGAGGGGTTGTTTGCCATCTTCGGGACCTGACTGAACAGTGGAC 1619
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 1620 TTGGCTCAAGCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAAACTGAATGTCTGGATTTTGCTGATACTTT 1693
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 1694 TATGGGGCACTTTGTGGCATGCTTCCTCCCTGGTAAGCCCTGGAATGGAGGGCTTTCAGGATGCTCCAGATGTG 1767
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 1768 GGTGCAGGCATTCACACATGGACAGTCTGGCCTGGAGGTCAGGTGGGGAGTGGTCAGCAGGCTGGCACCTCACA 1841
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 1842 AGGCAGGACCTAAGCCTAAGCGGACTTTTGTGACTATGCAGATGATGGAGAAGGTCCCTGTGGAGCAACGACTG 1915
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 1916 TTCCCGACTGTTCCCGTTCTCCCACCCCACCCCACCCCACGTCCACCTCTTTCTGTGAGCACTTTGGGTGCAGG 1989
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 1990 AGCCCAGAGGCTAGCGGTGCCCGAGCTTAGGTGCAGGTGTGAGACTCGGGCTGCTCTTCCCACAACCCTGTGCC 2063
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2064 TTGCTGGTGAGCAGGGAGAGCAGTAGAGGCCGGGACAGGTCGGAGTGCAGGGTTCATTGCCTGGGTGACACCCT 2137
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2138 TTCTTCCTGTCTCACTACTCCTGGGCTTCTTTCTAGCAGAGGGGAACAGTACCATCTCCATAATTTGGGGAGGA 2211
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2212 TAGAGCTCTCGAGTGAAGGAGCCTCCGCATCCCTGGGGCATGTGTACCTAGAACTCCCCCTCCTTCTCAAAACC 2285
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2286 CTTTCTGGTTGGAGTTGTTATTCTGTCCCATCTTCCACTGCTAATGTGTCTCCCAGGGGACAGATGGCCTTCTT 2359
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2360 TGTCATCTCCCCTCTCCGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAGACAG 2433
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2434 CTGAATATTAATGCACGCCATCCTCAGAATGGAGAGGACCTGCTAGGCATCTTAGCTCTCCCAGCTCGTGCCTG 2507
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2508 TAAAGCCAGCACTCAGGAGGCTCTGAGAGTTCAAGTCCAGCCTGGGCTACTGAGTGAGACCTGGTCTCAGGAAC 2581
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2582 ACTCCAAATAGGTTTGGGTTTGAGCGCTGGAGATCATAGCTGAGTTGGTAGTGTGCTTGCCTAGCATGTACAAA 2655
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2656 GCTCTGGGATCCACCCCCAGCACCACTTAAGCCAGGCGTGGCGGTGCACGCCTGCACTCCTGGCCCTGGGAAGT 2729
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2730 AGTGGTAAGCAGGATGGGGCATTCAAGGTCATCGCCAGTTAGTTACTTGACGAGGTTGAGGCCAGCCAAGGAAA 2803
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2804 CAGGAGACCATCTTGGGGAAAATGATTCTAAGGAGAGATAGATTGTCTTTGTCTCTGCCTAAAGCCTTTGGAAG 2877
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2878 CAAGCCACTCATCTTCGCTGTTTGGCGCTCTGGAGGTGGGGTGGGCATTGAAGGCAAGGAGCTGCTTTGCTGTG 2951
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 2952 TGTCCATGAGGTCCTCAGGGAGAAGCCCACCTCCCTCACCAAAGGAAGCAGCAAGATGGGTGCCCGGTTGGGGT 3025
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 3026 GGGTGGGACCTGCTGAGTCTCCCATCCCTCAAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTCCC 3099
Query 1266 -------------------------------------------------------------------------- 1265
Sbjct 3100 TTAACAACTGGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTTGCCATCTTCACTTACTGCTTCCGTTTTC 3173
Query 1266 ------------------------------------------------------------------------- 1265
Sbjct 3174 CATCTGTTTTGTTAATAAAATATGTATATTTACTCCCGATATCACAATAAAATAAATTATTTGATCTAAGTCA 3246
