Nucleotide Global Alignment
Description
- Query:
- TRCN0000466327
- Subject:
- XR_001739082.1
- Aligned Length:
- 2685
- Identities:
- 831
- Gaps:
- 1822
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGCGGGCTCTCGGCAGGCGGGAGGCGGCAGGGCTGGCATTGCAGTGCGGGCCGTGCGGGCTGCGCGGGCGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGCGCGGGCGGCAAACTGCGGGCACCCGGCACCCCGCAGCCAGTACCGGGCGGAGGCGTCAGAGCCGCGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCGGACGAGCAGGCCCAGGCATCCAGTACCCTGCTGACTCTGACATGCCCCCAGCCTCCCCCAGCTCTGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAGCCCTGGTGCCAGAGACCTTCTCCCATTTCTCCCTATGGGTGCCTGACCTGAGGGCAGAGACATCTGAGTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTATAAGCACAGCAGGACACCAGGACCTGGCCTGAAGACATTTCCTCTCCTCCCCTCTGGATTTCTCAGAGAC 370
Query 1 ---------ATGACCACAGCAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACCCGCTGGTGTCTTGCAAGCT 65
|||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTTCTGCGATGACCACAACAAGGTACCGGCCCACCTGGGACCTGGCCCTCGACCCGCTGGTGTCTTGCAAGCT 444
Query 66 CTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCC 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGTCTTGGGGAGTACCCAGTGGAGCAGATGACAACCATAGCCCAGTGCCAATGCATCTTCTGTACTCTGTGCC 518
Query 140 TGAAACAGTATGTTGAGCTCTTGATCAAAGAAGGATTAGAAACCGCAATTAGCTGCCCAGATGCTGCCTGCCCT 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGAAACAGTATGTTGAGCTCTTGATCAAAGAAGGATTAGAAACCGCAATTAGCTGCCCAGATGCTGCCTGCCCT 592
Query 214 AAACAGGGCCACCTACAGGAGAACGAGATTGAGTGCATGGTTGCAGCTGAAATTATGCAAAGATATAAAAAGCT 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAACAGGGCCACCTACAGGAGAACGAGATTGAGTGCATGGTTGCAGCTGAAATTATGCAAAGATATAAAAAGCT 666
Query 288 ACAATTTGAAAGAGAGGTGCTGTTTGATCCCTGTCGGACTTGGTGCCCGGCGTCCACCTGCCAAGCTGTGTGTC 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACAATTTGAAAGAGAGGTGCTGTTTGATCCCTGTCGGACTTGGTGCCCGGCGTCCACCTGCCAAGCTGTGTGTC 740
Query 362 AGCTCCAGGACGTGGGGCTGCAGACCCCCCAGCCAGTGCAGTGCAAAGCCTGCCGTATGGAATTCTGCTCCACC 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCTCCAGGACGTGGGGCTGCAGACCCCCCAGCCAGTGCAGTGCAAAGCCTGCCGTATGGAATTCTGCTCCACC 814
Query 436 TGCAAAGCCAGCTGGCACCCTGGCCAGGGCTGCCCGGAGACCATGCCGATCACCTTCCTCCCCGGGGAGACCAG 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCAAAGCCAGCTGGCACCCTGGCCAGGGCTGCCCGGAGACCATGCCGATCACCTTCCTCCCCGGGGAGACCAG 888
Query 510 TGCTGCTTTCAAAATGGAAGAAGATGACGCGCCCATCAAGCGCTGCCCCAAGTGCAAAGTCTACATCGAGCGAG 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGCTGCTTTCAAAATGGAAGAAGATGACGCGCCCATCAAGCGCTGCCCCAAGTGCAAAGTCTACATCGAGCGAG 962
Query 584 ACGAAGGCTGCGCGCAGATGATGTGCAAGAACTGCAAGCACGCCTTCTGCTGGTACTGCCTGGAGTCTCTGGAC 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACGAAGGCTGCGCGCAGATGATGTGCAAGAACTGCAAGCACGCCTTCTGCTGGTACTGCCTGGAGTCTCTGGAC 1036
Query 658 GATGATTTCCTTCTGATACACTACGATAAGGGACCCTGCCGGAACAAGCTGGGCCACTCCCGGGCATCTGTGAT 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GATGATTTCCTTCTGATACACTACGATAAGGGACCCTGCCGGAACAAGCTGGGCCACTCCCGGGCATCTGTGAT 1110
Query 732 CTGGCATCGGACACAG--------GTTGTGGGCATTTTTGCAGGATTTGG-GCTGCTGCTCTTGGTG-----GC 791
|||||||||||||||| ||..||||.|.|..||.||||..||| |.|.|.| ||||| |.
Sbjct 1111 CTGGCATCGGACACAGCCTACCGTGTGCTGGGTACTGCTGTAGGAGCTGGAGATACAG----TGGTGCGTGAGA 1180
Query 792 CTCACCTTTCCTACTCCTGGCCACTCCCTT-TGTACTTT------------------GCTGCAAGTGCAAGTGC 846
|..|..|.||||.||.| |..|||.|.|| || ||| ||.|||||..|| |
Sbjct 1181 CAGATGTGTCCTTCTAC--GGAACTACGTTCTG---TTTAGGGACAGAGATGATAAAGCAGCAAGGACA----C 1245
Query 847 AG----------------TAAAGGTGAC--------------------------------GAC-GACCCGTT-- 869
|| ||.||||||| ||| |||||.||
Sbjct 1246 AGAACCTAATAAATCAGCTAGAGGTGACGTGATGGGGAGATGGTCAGAGATGATGGCAGGGACAGACCCTTTTA 1319
Query 870 ------------------ACCCACC------------------------------------------------- 876
|.|.|||
Sbjct 1320 GGGCCTGGCAGTCCACAGAGCAACCCTGGATCTTGTGCTGGGTGAGTGGGAAGCTGCTGAGGGATTAGTGGCAG 1393
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1394 GAGGCACATTGGCTGCTGCTCCCTGCCTGCTCCTCGAGAGGCGTGAAGGGCTCAAGTCTGTGACTCCTTCAGGA 1467
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1468 GAGCCTCTGAGGCACATGTGTCAGCCTCATCTAAAAGATGGAGAAACTCAGTCTCAAGGCAGTTGCCAGGACGA 1541
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1542 GGGAAAGGTCCACCTACAGCTGCACTTCCTGGACAATCTTAAATGCCGACCACGTGGCAGAGCCTGTGGGCGTC 1615
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1616 CACAGCAGGCGATAAGACACGCCTCCCATCAGAGAGCAGATGCTGAGCATTCTTGGCCTCGCAGGCCGTAGGCC 1689
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1690 TCTGCTGCACCTGTCAACTCCACCTGGCGGCACAGAAGCTGCCAACGGTACGTCAGTGAGTTACCTTGGCCGTG 1763
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1764 TTCCAGTGAAACTGTTTACACAGGCAGGTGGAAGTGACTGTGGTGATGGTTGCGTAACTCTGTGAACACACTGG 1837
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1838 AAACCATTGAATGTGTGTACTTGATCTGAATTGCGTGGCACAGGAATTATGTCCCAATAAAGCTGTATGGATAA 1911
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1912 ACAAAACAGAACAGATGATGAAGGCAGATTTGGCCCCCGGGCCATGGCGTACTGCCCTCTGGTCTAGAGAGTTG 1985
Query 877 -------------------------------------------------------------------------- 876
Sbjct 1986 GTTTGAGCTCCTCTGACTGTTCTCTTTGCACGTGGCCCGGCACGGCTTGAATCCACGCCCCTTGCAGCTCTGCT 2059
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2060 GGAATCCGCGCCCCTTGCAGCTCTGCTGGAATCCGCGCCCCTTGCAGCTCTGCTGGAATCCGCGCCCCTTGCAG 2133
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2134 CTCTGCTGGAATCCGCGCCCCTTGCAGCTCTGCTGGAATCCGCGCCCCTTGCAGCTCTGCTGGAATCCGCGCCC 2207
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2208 CTTGCAGCTCTGCTCGAATCCGCGCCCCTTGCAGCTCTGCTCTGGCTGCTGTGACAAAGCGCTGCAGACTGGGT 2281
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2282 GGCTCAGAACAGCAGAAATGTATTGGCTCAGTCCTGGAGCTCAGAATTCTGAAATCGAGGTGTCAGCAGGGCCC 2355
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2356 TGCCTGCTCTGAAACCTGTAGGAGAGTCCCTCCGGCCTTGTCCAGCTTCTGTGGTTCGCCAGCCATCTGCGGCA 2429
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2430 TTCCTGGACAGATCGATGCGTCACTGCAATCCTCCGTCTTCCTCCGGCTGCCTCTTCCCTGTGCGTCTCCACCT 2503
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2504 CGTCTTCCATCATTGTCCAAATCCCCCCTTTCTATCAGGACATCAGTGGTATGGGATCGAGGCCCACGCTAATC 2577
Query 877 -------------------------------------------------------------------------- 876
Sbjct 2578 ACCTCATGGTTGTGGGCATTTTTGCAGGATTTGGGCTGCTGCTCTTGGTGGCCTCACCTTTCCTACTCCTGGCC 2651
Query 877 --------------------- 876
Sbjct 2652 ACTCCCTTTGTACTTTGCTGC 2672
