Nucleotide Global Alignment

Description

• Query: TRCN0000466433
• Subject: NM_001017967.4
• Aligned Length: 1362
• Identities: 963
• Gaps: 291

Alignment

Query    1  ATGGAAGATCCGTCGGGGGCTCGCGAGCCCCGGGCCCGGCCGAGAGAGCGGGACCCGGGACGGCGCCCCCACCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAAGATCCGTCGGGGGCTCGCGAGCCCCGGGCCCGGCCGAGAGAGCGGGACCCGGGACGGCGCCCCCACCC  74

Query   75  AGACCAAGGCCGCACCCACGATCGACCGCGGGACCGACCCGGGGACCCGCGCAGGAAGCGAAGCAGCGACGGGA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGACCAAGGCCGCACCCACGATCGACCGCGGGACCGACCCGGGGACCCGCGCAGGAAGCGAAGCAGCGACGGGA  148

Query  149  ACCGGCGAAGGGACGGGGACCGGGACCCGAAGAGAGACCAGGAGAGGGACGGGAACCGCGACCGGAACCGGGAC  222
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACCGGCGAAGGGACGGGGACCGGGACCCGGAGAGAGACCAGGAGAGGGACGGGAACCGCGACCGGAACCGGGAC  222

Query  223  CGGGAGAGGGAGAGAGAGAGGGAAAGAGACCCGGACCGAGGCCCCCGCCGGGACACACACAGGGACGCGGGCCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGGGAGAGGGAGAGAGAGAGGGAAAGAGACCCGGACCGAGGCCCCCGCCGGGACACACACAGGGACGCGGGCCC  296

Query  297  TCGCGCAGGTGAACACGGAGTTTGGGAAAAACCGCGCCAAAGCCGGACGCGGGACGGAGCCCGGGGACTGACCT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCGCGCAGGTGAACACGGAGTTTGGGAAAAACCGCGCCAAAGCCGGACGCGGGACGGAGCCCGGGGACTGACCT  370

Query  371  GGGACGCAGCCGCGCCTCCTGGGCCCGCGCCCTGGGAAGCCCCGGAGCCGCCGCAGCCGCAGAGGAAGGGAGAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGGACGCAGCCGCGCCTCCTGGGCCCGCGCCCTGGGAAGCCCCGGAGCCGCCGCAGCCGCAGAGGAAGGGAGAC  444

Query  445  CCCGGGCGCCGCAGACCCGAAAGTGAACCCCCTTCGGAGAGATATCTGCCCTCGACCCCCAGGCCTGGACGAGA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CCCGGGCGCCGCAGACCCGAAAGTGAACCCCCTTCGGAGAGATATCTGCCCTCGACCCCCAGGCCTGGACGAGA  518

Query  519  GGAGGTGGAATATTACCAGTCAGAGGCGGAAGGACTCCTGGAATGCCACAAATGCAAATACTTGTGCACTGGGA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGAGGTGGAATATTACCAGTCAGAGGCGGAAGGACTCCTGGAATGCCACAAATGCAAATACTTGTGCACTGGGA  592

Query  593  GA-GCCTGCTGCCAAATGCTGGAGGTTCTCCTGAA----------CT----TGCTGATCCTGGCCTGCAGCTCT  651
            || |..||.|| ||.||..|||||||..||.||||          ||    |||  |||.||||||.|..||.|
Sbjct  593  GAGGTGTGGTG-CAGATAGTGGAGGTGGTCTTGAATGGGATGGTTCTCATATGC--ATCGTGGCCTCCTACTTT  663

Query  652  GTGTCT-------TACAGTTCCA-------CAGGGGGCTACACGG-GCATCACCAGCTTGGGGGGCATTTACTA  710
            || .||       |.||||.|||       |||.||      ||| |        ||||.|||..||..|||||
Sbjct  664  GT-CCTTGCCGGATTCAGTGCCAGCTTTTCCAGCGG------CGGTG--------GCTTTGGGAACAACTACTA  722

Query  711  CTATCAGTTCGGAGGGGCTTACAGTG-GCTTTGATGGTGCTGACGGGGAGAAGGCCCAGCAACTGGATGTCCAG  783
            ||..|.|||| |||||     ||.|| |||                .|||.|||..|.|||.|||||   ||||
Sbjct  723  CTCACCGTTC-GAGGG-----CACTGAGCT----------------AGAGCAGGTTCGGCAGCTGGA---CCAG  771

Query  784  TTCTACCAGCTAAA---------GCT-GCCCATGGT-CACTGTGGCAATGGCCTGTAGTGGAGCCCTCACAGCC  846
                  ||| ||.|         ||| ||||.||.| .||.||||| .||| ||||                  
Sbjct  772  ------CAG-TACACGATCCTCCGCTCGCCCCTGATATACGGTGGC-GTGG-CTGT------------------  818

Query  847  CTCTGCTGCCTCT-----TCGTTGCCATGGGTGTCCTGCGGGTCC--CGTGGCA----TTGTCCACTGTTG-CT  908
            .||| |||..|||     ||.|..||||||||||..|.|   |||  .|.|.||    |.|..||.||||| |.
Sbjct  819  TTCT-CTGGGTCTGGGGGTCCTCACCATGGGTGTTTTAC---TCCAAGGAGCCAAGAGTCGAACAATGTTGTCA  888

Query  909  G----GTGAC------CGAAGG----CTTGTTGGACATGCTCATCGCG---GGGGGGTACATC-CCGGCCTTGT  964
            |    |||.|      ||.|||    |||      ||..|||.|.|||   |.|||.|||..| |.|||.|||.
Sbjct  889  GGGAAGTGGCTCCTCACGGAGGCCGCCTT------CAGCCTCCTAGCGGCAGTGGGCTACTGCACAGGCATTGG  956

Query  965  ACTTCTACTTCCACTACCT--CTCTGCTG-CCTATGGCTCTC----CTGTGTGTA----AAGAGAGGCAGGCGC  1027
            ..|| |||.|||   ||.|  ||||||.| .|.||.||.| |    ||   ||.|    |||||||  ||||.|
Sbjct  957  TGTT-TACCTCC---ACGTGGCTCTGCAGATCAATAGCAC-CGACACT---TGCAAAACAAGAGAG--AGGCTC  1020

Query 1028  TGTACCAAAGCAAAGG-CT-----------ACAGCGGTTTCGGCT-GCAGTTTCC-ACGGAGCAGATATAGGAG  1087
            |.|.||  .||||.|| ||           ||.||     |.||| ||||...|| |||||||         ||
Sbjct 1021  TATGCC--CGCAAGGGTCTCACCTGGATGGACTGC-----CAGCTGGCAGGCACCGACGGAGC---------AG  1078

Query 1088  CTGGAATCTTTGCTGCCCTGGGCATTGTGGTCTTTGCCCTG---------GGGGC------GGTCCTGGCCATA  1146
            |.|..|.||||||           ||||..|||    |.||         ||.||      |||.||||||.| 
Sbjct 1079  CAGCCACCTTTGC-----------TTGTCTTCT----CGTGATCATGTACGGCGCCAGCGTGGTGCTGGCCCT-  1136

Query 1147  AAGG----GCTACCGAAAAGTTAGGAA--GCTAAAAGAGAAGCCAGC--AGAA--------ATGTT--------  1196
               |    ||||||||.||   ..|||  ||||.|    |||.||||  ||||        |.|||        
Sbjct 1137  ---GCGTAGCTACCGAGAA---CAGAAGCGCTACA----AAGGCAGCCGAGAACAGCCCGGAAGTTACAGTGAT  1200

Query 1197  -----TGAATTT------------------  1203
                 .||||.|                  
Sbjct 1201  GCACCGGAATATCTGTGGTCTGGAACTCTT  1230