Nucleotide Global Alignment
Description
- Query:
- TRCN0000466457
- Subject:
- NR_135106.1
- Aligned Length:
- 4272
- Identities:
- 1220
- Gaps:
- 3051
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGGTGGGAGTCAATCATTTTGACAAGTCTCCTGAAAGGAACAGCTAGCAGGAACTGAAACCTTTTTCCATTT 74
Query 1 ---------------------------------------------ATGATGTGCTCACGGGTGCCCTCTGAACA 29
|||||||||||||||||||||||||||||
Sbjct 75 GGTCTCGTGGCAAAGGCAGAGATTGCTCCAGCAGCTCCACACAAAATGATGTGCTCACGGGTGCCCTCTGAACA 148
Query 30 GTCTTCTGGTACCTCTCTCTTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCCTTGGATGAGGATGGATTGG 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTCTTCTGGTACCTCTCTCTTGCCTAAAGACGGTGCCCCATTTTCTTGGGATTCCTTGGATGAGGATGGATTGG 222
Query 104 ATGACTCCTTGCTGGAGCTGTCAGAGGGAGAAGAAGATGATGGTGATGTAAATTACACAGAGGAAGAGATTGAT 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATGACTCCTTGCTGGAGCTGTCAGAGGGAGAAGAAGATGATGGTGATGTAAATTACACAGAGGAAGAGATTGAT 296
Query 178 GCACTGTTGAAGGAAGATGACCCATCATATGAGCAGTCTTCTGGGGAAGATGATGGTGGGCATGTTGAGAAGGG 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCACTGTTGAAGGAAGATGACCCATCATATGAGCAGTCTTCTGGGGAAGATGATGGTGGGCATGTTGAGAAGGG 370
Query 252 AGAAAGAGGGAGTCAAATTCTACTTGATACTCCCCGAGAGAAAAATTCATCGTACAGCCTGGGACCAGTAGCTG 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGAAAGAGGGAGTCAAATTCTACTTGATACTCCCCGAGAGAAAAATTCATCGTACAGCCTGGGACCAGTAGCTG 444
Query 326 AGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATCAAGTGGTCATGGACCAGCTCATACTAAACCATTA 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGACTCCTGACCTCTTCAAACTACCTCAGCTAAGTACATCAAGTGGTCATGGACCAGCTCATACTAAACCATTA 518
Query 400 AACAGACGCTCTGTACTAGAAAAGAATCTTATAAAAGTAACTGTTGCACCATTTAATCCAACAGTTTGTGATGC 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AACAGACGCTCTGTACTAGAAAAGAATCTTATAAAAGTAACTGTTGCACCATTTAATCCAACAGTTTGTGATGC 592
Query 474 TCTGCTTGATAAGGACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGATGAGAG 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTGCTTGATAAGGACGAGACTGATTCGTCCAAAGATACTGAAAAACTCTCTTCCCTTGGAGAAGAGATGAGAG 666
Query 548 AAGATGGTCTTAGCCCAAATGAAAGCAAACTTTGTACTGAATCTGAAGGGATCAGCCCCAATAACTCTGCCTGG 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGATGGTCTTAGCCCAAATGAAAGCAAACTTTGTACTGAATCTGAAGGGATCAGCCCCAATAACTCTGCCTGG 740
Query 622 AATGGGCCCCAGCTCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTGATAAAAATATGCCTGACAGTGA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AATGGGCCCCAGCTCTCTTCTTCAAACAATAACTTTCAACAGACTGTCTCTGATAAAAATATGCCTGACAGTGA 814
Query 696 GAACCCTACGTCTGTATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAATATGGAGTTATCCTGCAGAAATG 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAACCCTACGTCTGTATTCTCTCGGATCTCAGACCATTCAGAGACTCCTAATATGGAGTTATCCTGCAGAAATG 888
Query 770 GTGGTTCACACAAGTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCACCTCATCAAACAAACAGGATGTTCTT 843
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 889 GTGGTTCACACAAGTCAAGTTGTGAAATGAGATCTCTGGTTGTTTCCACCTCATCAAACAAA---GATGTTCTT 959
Query 844 AACAAGGATTCTGGGAAGATGAAAGGCCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAACTAAGAC 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 AACAAGGATTCTGGGAAGATGAAAGGCCATGAGAGAAGACTAGGCAAAGTCATTCCTGTTCTACAAACTAAGAC 1033
Query 918 CAGGACTAATGTTCCGACGTTTTCACAGTCAAATCTAGAACAGCAGAAGCAGCTTTATCTCAGGAGTGTCATTG 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 CAGGACTAATGTTCCGACGTTTTCACAGTCAAATCTAGAACAGCAGAAGCAGCTTTATCTCAGGAGTGTCATTG 1107
Query 992 CTCATATAGAAGACCCAGAGGACACTAACCAA------------------------------------------ 1023
||||||||||||||||||||||||||||||||
Sbjct 1108 CTCATATAGAAGACCCAGAGGACACTAACCAAGCCAAAAAATACTGGAAACAGCTTTGATAAAATGTTGATAAA 1181
Query 1024 --------------------------------GGTATCTCGGGGGAGCTTTGTGCCTTGATGGATCAAGTTCAT 1065
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 TGAAGGATGAATCCCTAGAAGTGGAATTGCTGGGTATCTCGGGGGAGCTTTGTGCCTTGATGGATCAAGTTCAT 1255
Query 1066 CATATGCAGCACTCAAAATGGCAGCATCCTTCGGACCTCACCACGCGAAACTACGCCCGCCGACAGAAACATCT 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 CATATGCAGCACTCAAAATGGCAGCATCCTTCGGACCTCACCACGCGAAACTACGCCCGCCGACAGAAACATCT 1329
Query 1140 GCAAAGATACAGTCTGACTCAGTGGGTTGACAGGAACATGCGAAGCCACCATCGGTTCCAGCGTCTCCCAGACT 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 GCAAAGATACAGTCTGACTCAGTGGGTTGACAGGAACATGCGAAGCCACCATCGGTTCCAGCGTCTCCCAGACT 1403
Query 1214 TCTCGTACAGA--------------------------------------------------------------- 1224
||||||||||.
Sbjct 1404 TCTCGTACAGTTAATTTGTGTCATCCCATCAGCAATGAAGGTCCCTATCCAGGGTCCTGCTTGGAGCAGCATTT 1477
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1478 CATGTTCTTTTGCTGTTTTGTGCTTTGCCGATTTTGGATTTTATTTTTCACAAAATTTTTATTTAAAAAACTCG 1551
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1552 TCACCTTTTGGAAATGCCCATTGCCGACTTGAATTTTTTTGTATGAAGTCCCTCCTGATTTTGTGTGTGTGTGT 1625
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1626 CTGTGTTTAAGCAAGCGTTCGGTTGGTATAGTTTTTTTTTGTTTTTTTAATTTAAATTGAAGGTAGCTGCCTCC 1699
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1700 TGAAAGCCAGCATTAAGCCAGAACACCCAGGTTCAAGCAAAAGACCCACCTCTCTGCAGAGGCAAAGTCTACTT 1773
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1774 TCTGGTACCTCAAAGAAATCATTGTTCAATCTTCCATAAGGAAGAGATTCTTTACCAGGCTGTGAGCCAGTGTT 1847
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1848 AGATAACTTGTGAATGGATATAAGTTACTTTTAACAACCCCTCTTACTTTTTTATTTGAATCCTCTGAATACCT 1921
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1922 GTCAGTATTTTAAAGTTGGCAATCCAGGACATTATAAGTAGGATGGAGCAGGAGAAGAATCCTATTGAAAGGAC 1995
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 1996 AAATTAAAATAGTAAATCCTCTCCTCTCCCTTCTGTAGGTACTAGCTGCCTTGATTTTTTTTTGTGGGTGGGGG 2069
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2070 GGATTTTTTCATTCCTTATTGAACTTATTTTGCACAATAGTGTTTACAAATCTTATACATCTTACTTTGACAGA 2143
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2144 AGACTTATAATACCTTGTGGTCTTGAGACTGGTTGTCTCCTTTGCCTTTCTTCAAGGATTTTCCTTTTTCTTTT 2217
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2218 TACCCCCCAGTGACCACTCTGCTCTTTAGGATTCTAGTGGCAGTATTCTTGTAACCTGTTAGACGTGGATATAC 2291
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2292 CTCTTCAGGATGGCCTCCTTGCTGTCTTTATTGAAGAGCTGCCCACCCAGAGTCTTGACTCTAGGGCAGGCTAG 2365
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2366 TGCTATTGTGGTGTCAGTTGATATTTAGTTTCATTTGCTGAACCCCAAATTTGAGTGTTAGTTAGGGAGCCTCC 2439
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2440 ATTCTGTGGGAGAGTGTGGAAAGGCACTCTTTTTTCTCCATATTAGTTAACAAGAGGTGTCTTTAGGCCCTGGA 2513
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2514 TGTTACCATCTCATTTGGTCAAGCCCCTGATACCTAGTTTCACATGGATGCTAACGTGGATGTAATATAGTTGT 2587
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2588 GACAGCCTATGCACAAAAGCATTACCTGATCTTAAGGTTTGGTATTCTAACCAAAGTTGACAGACTGTGCGTCT 2661
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2662 GTCTTAATGGATGTCTTAGGAGTTGGTTATTCTCTCTTTTTTTTTTGAGACGGAGTTTCGCTGTTGTTGCCCAG 2735
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2736 GCTGGAGTGCAATGGCGTATCTCCACTCACCACAACCTCCGCCTCCTGGGTTCAAGGGATTCTCCTGTCTTAGC 2809
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2810 CTCCTGAGTAGCTGTGATTACAGGCATGCGCCACCATGCCTGGCTAATTTCATATTTTTTAGTAGAGACAGGAT 2883
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2884 TTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCTGCCCACCTCGGCCTCCTAAAGTGCT 2957
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 2958 GGGATTACAGGCATGAGCCACTGCACCTGGCCGGTTATTCTCTCTTTACAGATAGCTATAGACATCATTTTAGG 3031
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3032 AAGTGTTGCAGTCTGGCATTTGTGCTATTGTTCATTCTCTGTGAAGGCTGTTCATAGTTGCTATAGCCTGTGTT 3105
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3106 TAGTTTTGTGATTTCATCAATCCCATCTTTCTGTGTGAGTAATGCATTCTAAACATCCTACCCCACTTTAGAAA 3179
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3180 CGGACGTGGGGAACGCTTGGTCATTTAAGCCAACAATAAATTTAGGTGAATGTCCCTAAGTGTTTACTGTTTTT 3253
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3254 ATCCAGTCAAGGATTTGCTTTTCCTTGAACATTTGTTTTAAATTCTGGGGCCAAAATGCAAAGGAGAAGTTCTA 3327
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3328 TTCAAAGGCAGTAGTTGAAATCTATTATTTTAGTTAGCCTACTTGGCATTTACTACATCGGTCACTTCTCCAGG 3401
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3402 CTGCCCTAAATTAGGTTGATGGAGTGAGACATGCCAAACATCCACCTTTGGGACCATAGCATAGTTAAAATTAA 3475
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3476 ATGTAGTTGGAATAGCTAGCATTGCAGCTACAGTAGGGAACTGTAGTCTAGTTCCCTACAGAAAACCCAAGGAG 3549
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3550 TGAAGGGACAGGATTTTGCCTAGGCAAAAATCTAAGACTCGTGCCCTCCTGGTACATGGGGTTTTAAGACTGAA 3623
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3624 TGTGTAATAGGAGCACTGCCTTTGCCAAATCAAATGAGTGACAGGTTAACTAGAAAATGTGACAATCACATTTC 3697
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3698 CTCTTAGCTCAAATAATTCTGTTTTTCCAAAGCTTTAGCAGCTTAATTAAATCTGTTGGACTGGGGGAGGAGAG 3771
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3772 AGCTGTTCTCTAGTGGTTAACATGGTATTCTTTAAGAAGAAAAAACAAAGCCAAAGAAAACTCATTATCTGGCA 3845
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3846 TGTTCGCCTTAAAGATGGTACTGGGTAGAATCTGGAGTTTTCATCTCTTTTCAAAGCTGCATATCTCTTATATT 3919
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3920 TGGTATTGGCCTCTAAGTCTAATATTGCAGTTGGAATTCTTGCTGTATTATTTTTTAAGCAAGTGTTAGGTGCA 3993
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 3994 TTTAACTGCTTTCTTCATCCATGACGACATTCCCACCATGGGGGTCTTGACAAAGCAGAGTAAAAATATGCTGT 4067
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 4068 TTACATTGTTTACTTACAAGTAAGGAGCCTGAAATAACCTGTAGTTTCGAATGCAGGCCCTGATTTACTGGCGT 4141
Query 1225 -------------------------------------------------------------------------- 1224
Sbjct 4142 TGTCAGTTTCAATTATGAAACTGAAGTTTGGTGCCTCCTCTTTATCATGTTTTTTCCCTTGTAGCAGTTGTGTT 4215
Query 1225 ------------------------------------------------------ 1224
Sbjct 4216 TAATGTCATTAAAAAGAAATAAAAGTTCTTTGTCAGTGACATAAAAAAAAAAAA 4269
