Nucleotide Global Alignment

Description

Query:
TRCN0000466494
Subject:
NM_001285478.1
Aligned Length:
1686
Identities:
340
Gaps:
1311

Alignment

Query    1  ATGGCGACTGATACGTCTCAAGGTGAACTCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGAT  74
            |||||.|||||||.||||||||||||||||.||||||||||||||||||||||||||||||||||.||||||||
Sbjct    1  ATGGCAACTGATATGTCTCAAGGTGAACTCATCCATCCTAAGGCACTCCCACTTATAGTAGGAGCGCAGCTGAT  74

Query   75  CCACGCGGACAAGTTAGGTGAGAAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGG  148
            ||||||||||||||||||||||||.|.||||||||.|||||||||.||.||||||.|.||||||||||||||||
Sbjct   75  CCACGCGGACAAGTTAGGTGAGAAAGCAGAAGATACCACCATGCCTATACGTCGAGCCGTGAATTCTACCCGGG  148

Query  149  AAACTCCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCT  222
            |||||||.|||||||||||.|||||||||||||||||||||||.|||||||||||...||||||||||||||||
Sbjct  149  AAACTCCACCCAAAAGCAAACTTGCTGAAGGGGAGGAAGAAAAACCAGAACCAGATGGAAGTTCAGAGGAATCT  222

Query  223  GTCTCCACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGA  296
            .||||.||||||||||||||.||||||||.||||||||||||||.||.|||||||||||||||||.||||||||
Sbjct  223  ATCTCTACTGTAGAAGAACAGGAGAATGAGACTCCACCTGCTACATCCAGTGAGGCAGAGCAGCCCAAGGGGGA  296

Query  297  ACCTGAGAATGAAGAGAAGGAAG------AAAATAAGTCTTCTGAGGAAACCAAAAAGGA-GAGAGCTGATAGT  363
            .|||||||.||.|||||||||||      |.||.||||||.||||||||.|||||||||| ||||      ||.
Sbjct  297  GCCTGAGAGTGGAGAGAAGGAAGAGAACAACAACAAGTCTGCTGAGGAACCCAAAAAGGATGAGA------AGG  364

Query  364  ATTCATTCCACTCTTTTCATAATTGGTCAGAACAGT--------------------------------------  399
            | |||.||           |||      ||||.||.                                      
Sbjct  365  A-TCAGTC-----------TAA------AGAAAAGGAGAAGAAAGTGAAAAAGACGATTCCTGCCTGGGCGACT  420

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  421  CTCTCTGCCAGCCAGCTAGCCAGGGCCCAGAGACAAACCCCCATGGCTTCCTCCCCACGGCCCAAGATGGACGC  494

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  495  AATCTTAACTGAGGCCATTAAGGCATGCTTCCAGAAGACTGGCGCCTCGGTGGTTGCGATTCGAAAGTACATCA  568

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  569  TTCATAAGTACCCGTCTCTGGGTCTGGAGAGAAGGGGCTATCTGCTCAAGCAAGCGCTGAAGAGAGAGTTAAAC  642

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  643  AGAGGAGTCATCAGACAGGTAAAAGGAAAAGGTGCATCTGGCAGTTTTGTTGTGGTCCAGAAATCAAAACCACC  716

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  717  TCAGAAATCCAAAAACAGAAAGAAGGGCTCGGCTCTGGATCCAGAACCACAAGTAAAACTGGAAGATGTTCTCC  790

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  791  CGTTGGCTTTTACTCGGCTCTGTGAACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATACGTGTCTCAGTAT  864

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  865  TACCCTAAGCTCAGAGTGGACATCAGGCCCCAGTTGTTGAAGAATGCTCTGCAGCGAGCAGTAGAGAGAGGCCA  938

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct  939  GCTCGAGCAGATAACTGGCAAGGGTGCTTCGGGGACATTTCAGCTGAAGAAATCAGGGGAGAAGCCCCTGCTGG  1012

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1013  GTGGAAGCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAACGAGCCTAAGACCTGCTCCACCACT  1086

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1087  GCTCTGAAGAAGTATGTCCTGGAGAACCACCCAGGGGCCAACTCTAACTATCAGATGCATTTGCTGAAAAAAAC  1160

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1161  CCTGCAGAAATGTGAGAAGAACGGGTGGCTGGAGCAGATCTCTGGGAAGGGGTTCAGCGGCACCTTCCAGCTGT  1234

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1235  CCTTCCCCTACTACCCTAGCCCAGGAGTTCTATTTCCGAAGAAAGAATCCGGTGGCTCTGACGATGAAGATGAA  1308

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1309  GATGACGATGACGATGAATCATCAGAAGACTCTGAGGATGAGGAACCACCACCCAAGAGGAGCTTACAGAAGAA  1382

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1383  AACACCAGCCAAGTCCCAAGGGAAGACAGCCTCCATGAAGCAGAGAGGGTCGAAGCCTGCGCGGAAAGTCCCGG  1456

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1457  CTGCCCAGAGAGGGAAAGTGAGGCCGCTGCCTAAGAAAGCTCCACCCAAGGCCAAGACCCCTGCCAGGAAAGCC  1530

Query  400  --------------------------------------------------------------------------  399
                                                                                      
Sbjct 1531  AGACCCTCTCCCTCAGTCATCAAGAAGCCTAGTGGGAGCTCCTCCAGAAAGCCCATAGCCAGTGCACGAAAGGA  1604

Query  400  ----------------------------------------------------------  399
                                                                      
Sbjct 1605  AGCGAAACTGCCCGGGAAGGGCAAATCTGCCATGAAGAAGTCTTTCAAGACAAAAAAG  1662