Nucleotide Global Alignment
Description
- Query:
- TRCN0000466494
- Subject:
- XR_001737207.1
- Aligned Length:
- 3948
- Identities:
- 334
- Gaps:
- 3590
Alignment
Query 1 ----------------------------------------------ATGGCGACTGATACGTCTCAAGGTGAAC 28
.||||| ||..||.|| ||
Sbjct 1 GGGGGGCGGGGCGGCAGAGCTCGGCGGCTGGGACTGGAGGACAGCGGTGGCG---GAGGCGACT--AG------ 63
Query 29 TCGTCCATCCTAAGGCACTCCCACTTATAGTAGGAGCTCAGCTGA---TCC-------ACGCGGACAAGTTAGG 92
||.| ||| .|||||...||.|| .|| ||||||.| |..|||
Sbjct 64 -CGGC--------GGC---------------GGGAGCGGCGCCGAGAGGCCGTGCGGGACGCGGGC--GCCAGG 111
Query 93 -------------TGAGAAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAACT 153
.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 ACCGGCCGAACGCAGAGAAGGTAGAAGATAGCACCATGCCGATTCGTCGAACTGTGAATTCTACCCGGGAAACT 185
Query 154 CCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTCTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 186 CCTCCCAAAAGCAAGCTTGCTGAAGGGGAGGAAGAAAAGCCAGAACCAGACATAAGTTCAGAGGAATCTGTCTC 259
Query 228 CACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTG 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 260 CACTGTAGAAGAACAAGAGAATGAAACTCCACCTGCTACTTCGAGTGAGGCAGAGCAGCCAAAGGGGGAACCTG 333
Query 302 AGAATGAAGAGAAGGAAGAAAATAAGTCTTCTGAGGAAACCAAAAAGGA-GA---------------------- 352
||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 334 AGAATGAAGAGAAGGAAGAAAATAAGTCTTCTGAGGAAACCAAAAAGGATGAGAAAGATCAGTCTAAAGAAAAG 407
Query 353 GAGCTGATAGT----------ATTCATTCC------ACTCTTT---TCA------TAATTGGTCAG-------- 393
|||..||.||| ||||.|||| ||.|||| .|| || |.|||
Sbjct 408 GAGAAGAAAGTGAAAAAAACAATTCCTTCCTGGGCTACCCTTTCTGCCAGCCAGCTA----GCCAGGGCCCAGA 477
Query 394 AACAGT-------------------------------------------------------------------- 399
||||..
Sbjct 478 AACAAACACCGATGGCTTCTTCCCCACGTCCCAAGATGGATGCAATCTTAACTGAGGCCATTAAGGCATGCTTC 551
Query 400 -------------------------------------------------------------------------- 399
Sbjct 552 CAGAAGAGTGGTGCATCAGTGGTTGCTATTCGAAAATACATCATCCATAAGTATCCTTCTCTGGAGCTGGAGAG 625
Query 400 -------------------------------------------------------------------------- 399
Sbjct 626 AAGGGGTTATCTCCTTAAACAAGCACTGAAAAGAGAATTAAATAGAGGAGTCATCAAACAGGTTAAAGGAAAAG 699
Query 400 -------------------------------------------------------------------------- 399
Sbjct 700 GTGCTTCTGGAAGTTTTGTTGTGGTTCAGAAATCAAGAAAAACACCTCAGAAATCCAGAAACAGAAAGAATAGG 773
Query 400 -------------------------------------------------------------------------- 399
Sbjct 774 AGCTCTGCAGTGGATCCAGAACCACAAGTAAAATTGGAGGATGTCCTCCCACTGGCCTTTACTCGCCTTTGTGA 847
Query 400 -------------------------------------------------------------------------- 399
Sbjct 848 ACCTAAAGAAGCTTCCTACAGTCTCATCAGGAAATATGTGTCTCAGTATTATCCTAAGCTTAGAGTGGACATCA 921
Query 400 -------------------------------------------------------------------------- 399
Sbjct 922 GGCCTCAGCTGTTGAAGAACGCTCTGCAGAGAGCAGTAGAGAGGGGCCAGTTAGAACAGATAACTGGCAAAGGT 995
Query 400 -------------------------------------------------------------------------- 399
Sbjct 996 GCTTCGGGGACATTCCAGGAACTCCGACCCACCTGGTGCAGAGGAGTCTTGTCTTGACCTGCTTTGGGAGAGTG 1069
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1070 TTGTCTTGATGCTTTTCTCTTCCTCCTTGGAAAACAGCTGAAGAAATCAGGGGAGAAACCCCTGCTTGGTGGAA 1143
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1144 GCCTGATGGAATATGCAATCTTGTCTGCCATTGCTGCCATGAATGAGCCGAAGACCTGCTCTACCACTGCTCTG 1217
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1218 AAGAAGTATGTCCTAGAGAATCACCCAGGAACCAATTCTAACTATCAAATGCATTTGCTGAAAAAAACCCTGCA 1291
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1292 GAAATGCGAAAAGAATGGGTGGATGGAACAGATCTCTGGGAAAGGGTTCAGTGGCACCTTCCAGCTCTGTTTTC 1365
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1366 CCTATTATCCCAGCCCAGGAGTTCTGTTTCCGAAGAAAGAGCCAGATGATTCTAGAGATGAGGATGAAGATGAA 1439
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1440 GATGAGTCATCAGAAGAAGACTCTGAGGATGAAGAGCCGCCACCTAAGAGAAGGTTGCAGAAGAAAACCCCAGC 1513
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1514 CAAGTCCCCAGGGAAGGCCGCATCTGTGAAGCAGAGAGGGTCCAAACCTGCACCTAAAGTCTCAGCTGCCCAGC 1587
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1588 GGGGGAAAGCTAGGCCCTTGCCTAAGAAAGCACCTCCTAAGGCCAAAACGCCTGCCAAGAAGACCAGACCCTCA 1661
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1662 TCCACAGTCATCAAGAAACCTAGTGGTGGCTCCTCAAAGAAGCCTGCAACCAGTGCAAGAAAGGAAGTAAAATT 1735
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1736 GCCGGGCAAGGGCAAATCCACCATGAAGAAGTCTTTCAGAGTGAAAAAGTAAATTTTATAGGAAAAAAGGGTAT 1809
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1810 CATGATGAAATTCAAAATCTTATTTTCTAAGGTCAGTGTGCATTTGTTTAGTTTTGATGCTTTTCAAATTACAT 1883
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1884 TATTTTCCTCCCCTATGAACATTGTGGGGAGGGACTCTAAATAAACCAGTTTAGGCATTTGCTAGCTTTAGGTG 1957
Query 400 -------------------------------------------------------------------------- 399
Sbjct 1958 CTTTTATTGGTGCCTGCCCTTTTCCTTGTTCATTTTAATTTCTGCAATAATCCTGGACTTTCCTAAACTATGTA 2031
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2032 ATGTATACTTGTCCTTTTTCTCTGCCTCCCCCAACCCCCTGTTGTTTTTATGGTCAGCTTTGCCTTTTTTTTTT 2105
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2106 CTTCCAATTTTATCTAAACAGTTGCAGAGATTTTTATATTTGTAGAAAGCATCAAGAACGGTATGCCAGTCAGG 2179
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2180 TCCTGGAAGTAAAATGGAGGCACAATATAGCACTGACTGAGTTGTAAAGCCTCCTGCCTGGAGACTTCAGTTAT 2253
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2254 AGCTGTAATAATTAATCTTATTTATAAAAGCCACTCCACTAACCTTTTCTCTCCAACTGTAAACACAGAGACAG 2327
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2328 CTTTGGGAATAAGCCAAAAACAGGGTGATCTCATTAGATTTTGAAGATATATGACTCCTTTGGGCTACATTTCA 2401
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2402 TATTGATCAATTTCTAGGTATTTTTCACTGGCCCAAAGTATTGCATTCCCTTAACAGCAAGCACAAGTTCTCTA 2475
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2476 TATCACTTGTTTTTTGTTGTTGTTGTTGTTGTCGTCGTTGTTTTGAGACGGAGTCTTGCTCAGGTGCCCCGGAG 2549
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2550 TGCAGTGGTGCAATCTCAGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCTTCAGCCTCCCG 2623
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2624 AGTAGCTGGGATTACAGGTGTGTACCACCACGCCTGGCAATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCGC 2697
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2698 CGTGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGAT 2771
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2772 TACAGGAGTGAGCCACTGTGCCTGGCCTATCCCACTTGGTTTTTGACTGAAGGGGAAGTGTAGAAATATATTGA 2845
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2846 TTTGTGATTTCTGGTGTCACCTGTGTTACCAAAAATCAAAACAAATCTTTTTTATTTTTTATTATTATTATTAT 2919
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2920 TTTTGAGACAGAGTCTCGCTCTGTCGCCCAGTGTGGAGTGCAGTGGTGTGATCTTGGCTCACTGCAAACTCCGC 2993
Query 400 -------------------------------------------------------------------------- 399
Sbjct 2994 CTCCCAGGTTCAAGCGATTCTCCCACCTCAGCCTCCTGAGTTGGGTCCTACAGGCGCACACGACCACGCCCAGC 3067
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3068 TAATTTTTTGTATTTTTAGTAGAGTTGGGGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTG 3141
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3142 ATCCACTCACCTCAGCCTCCCAAAATCCTGGGGTTACAGATGTGAGCTACCACTCACGGCCCAAATCTTCTTGA 3215
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3216 TCATATGTTTAAATATATTTTTTAATATTTGGAGCATGAGTTGTCACTTCTTGTTTGCCTTTTTTATAAGGAAA 3289
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3290 TGTTGGAGAGTTACATCATTGCTAATGTAGAAATGTTAAGTGGAAAAATATACAGTTTGGTAAAATAAACTAGA 3363
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3364 TTCTACATTTATTTGTGGGTTTTTTTCCCCTCCTTTCTTTCCACAGCACTTTTGATATCAAGCAAGTGGCTTCC 3437
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3438 TTTTTGAGATATTAAAAAAAAAAAGAAAAGGAAAAAAGTAAATGAAGCCCAACTACCTAACCCTTTCTTATTTG 3511
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3512 TATTTGTTTTAGTATTGTGAAGTTGTGTTAAATAGTACTAGCTAGAAATACAAATTTCTGGTTATCATTTCTCT 3585
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3586 TCCCTGTGGCACTTGACATTTTAATTGTCTTAAAGTTTTTGAAGTACATCTTCTGGCCCCTTGAGTACTGCCAG 3659
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3660 AGGCAAAAGATGTTTGTTTCTTATTCATTCCACTTTTGTCTCCTGGGATCCCTTCTGTAGCCTAAAGTATGGCT 3733
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3734 GGGAAATGGACTTGAGAAGATTGGCTTGAATTAGATCATAATCATGTGTGATCCCATCATGAATTCATTGGAAT 3807
Query 400 -------------------------------------------------------------------------- 399
Sbjct 3808 TTGTGTTGCATGTAAGGCAATCTTTCCTGTTGTAAATCTTCCTTTTTTAATGTACATATATTTTGAAAAATATG 3881
Query 400 -------------------------- 399
Sbjct 3882 AATAAACATGAAATTTTAAAAGCTGC 3907
