Nucleotide Global Alignment

Description

Query:
TRCN0000466537
Subject:
XM_017010814.1
Aligned Length:
1342
Identities:
634
Gaps:
626

Alignment

Query    1  ATGCGGGTCACGGCGCCCCGAACCGTCCTCCTGCTGCTCTCGGGAGCCCTGGCCCTGACCGAGACCTGGGCCGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCCCACTCCATGAGGTATTTCTACACCGCCATGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCTCAGTGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCTACGTGGACGACACGCAGTTCGTGAGGTTCGACAGCGACGCCGCGAGTCCGAGAGAGGAGCCGCGGGCGCCG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGGATAGAGCAGGAGGGGCCGGAGTATTGGGACCGGAACACACAGATCTGCAAGACCAACACACAGACTTACCG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGAGAGCCTGCGGAACCTGCGCGGCTACTACAACCAGAGCGAGGCCGGGTCTCACACCCTCCAGAGGATGTACG  370
                                                                               |||.|.|
Sbjct    1  -------------------------------------------------------------------ATGAATG  7

Query  371  GCTGCGACGTGGGGCCGGACGGGCGCCTCCTCCGCGGGCATGACCAGTACGCCTACGACGGCAAGGATTACATC  444
            ||||||||.|||||||.|||||.|||||||||||||||.||.|||||.||||.|||||||||||||||||||||
Sbjct    8  GCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGATTACATC  81

Query  445  GCCCTGAACGAGGACCTGAGCTCCTGGACCGCGGCGGACACGGCGGCTCAGATCACCCAGCGCAAGTGGGAGGC  518
            .|||||||||||||||||.||||||||||||||||||||||.|.|||||||||||||||||||...|..|||||
Sbjct   82  TCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGCTTCTATGAGGC  155

Query  519  GGCCCGTGAG------GCGGAGCAGCTGAGAGCCTACCTGGAGGGCCTGTGCGTGGAGTGGCTCCGCAGATACC  586
                  .|||      ||.|||.||.|.||..||||||||||||||..||||.||||||.|||||||||||||.
Sbjct  156  ------AGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCAGATACT  223

Query  587  TGGAGAACGGGAAGGAGACGCTGCAGCGCGCGGACCCCCCAAAGACACATGTGACCCACCACCCCATCTCTGAC  660
            |||||||.||||||||||||||.||||||||.||.||.||||||.||||.||..||||||||||||||||||||
Sbjct  224  TGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATCTCTGAC  297

Query  661  CATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCGGGATGG  734
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  298  CATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCGGGATGG  371

Query  735  CGAGGACCAAACTCAGGACACCGAGCTTGTGGAGACCAGACCAGCAGGAGATAGAACCTTCCAGAAGTGGGCAG  808
            .|||||.||.||.||||||||.|||||||||||||||||.||.|||||.|||.|||||||||||||||||||.|
Sbjct  372  GGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGTGGGCCG  445

Query  809  CTGTGGTGGTGCCTTCTGGAGAAGAGCAGAGATACACATGCCATGTACAGCATGAGGGGCTGCCGAAGCCCCTC  882
            ||||||||||||||.|||||||.||.||||||||||||||||||||.|||||.|||||||||||..||||||||
Sbjct  446  CTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAGCCCCTC  519

Query  883  ACCCTGAGATGGGAGCCATCTTCCCAGTCCACCATCCCCATCGTGGGCATTGTTGCTGGCCTGGCTGTCCTAGC  956
            |.||||||||||||||..|||.|||||.||||||||||||||||||||||.|||||||||||.|.||||||.|.
Sbjct  520  ATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGTCCTTGG  593

Query  957  AGTTGTGGTCATCGGAGCTGTGGTCGCTACTGTGATGTGTAGGAGGAAGAGCTCAGGTGGAAAAGGAGGGAGCT  1030
            ||.||||||||..|||||||||||||||.||||||||||.||||.|||||||||||.|.||||..|||||||||
Sbjct  594  AGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATAGAAACAGAGGGAGCT  667

Query 1031  ACTCTCAGGCTGC-------------GTCCAGCG--------------ACA--GTGCCCA--------------  1061
            |||||||||||||             || |||||              |||  |||..||              
Sbjct  668  ACTCTCAGGCTGCAGCCTACTCAGTGGT-CAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATTTCTCCT  740

Query 1062  ----GGGCTCT------GAT-------GTGTCTC-----TCACAG---CT------------------------  1086
                |.|||||      |||       .||.|||     ||||||   ||                        
Sbjct  741  GGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCGGAAGGTGGGTGACA  814

Query 1087  --------------------------------------------------------------------------  1086
                                                                                      
Sbjct  815  TGTGGATCTTGTTTTTTTTGTGGCTGTGGACATCTTTCAACACTGCCTTCTTGGCCTTGCAAAGCCTTCGCTTT  888

Query 1087  --------------------------------------------------------------------------  1086
                                                                                      
Sbjct  889  GGCTTCGGCTTTAGGAGGGGCAGGAGCTTCCTTCTTCGTTCTTGGCACCATCTTATGAAAAGGGTCCAGATTAA  962

Query 1087  ----------  1086
                      
Sbjct  963  GATTTTTGAC  972