Nucleotide Global Alignment
Description
- Query:
- TRCN0000466541
- Subject:
- XM_017312455.1
- Aligned Length:
- 2610
- Identities:
- 1508
- Gaps:
- 906
Alignment
Query 1 ---------------------------ATGATGAGCATCAAAGCCTTTACGCTT-GTCTCTGCTGTGGAGCGGG 46
|||||||.||||||.|||||.|| ||| ||||||||.|||||.||||
Sbjct 1 ATGACTGGGCCAGATCACCCGGTAGACATGATGAACATCAAGGCCTTCAC-CTTGGTCTCTGCAGTGGAACGGG 73
Query 47 AGCTGCTGATGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGC 120
|.||||||||||||||||..||.|.|.|||.|||.|||||.|||||||||||.||||||.|.||.||.||.|||
Sbjct 74 AACTGCTGATGGGCGACAGAGACCACATCAGCATTGAGTGTGTGGAGTGCTGTGGCAGGAATCTTTATGTCGGC 147
Query 121 ACCAACGACTGCTTCGTCTACCACTTCCTGTTGGAGGAG-AGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTG 193
|||||.|||||||||.|.|||||.||||||.|||||||| |||||| |||||.|.|||.||||.||.|||..||
Sbjct 148 ACCAATGACTGCTTCATTTACCATTTCCTGCTGGAGGAGAAGGCCA-TGCCTACAGGGACAGCTACATTCGTTG 220
Query 194 CCACCAAACAGCTGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGAGCTGCGCGCGGCCTCAGCACTCAAC 267
|||||||||||||.||.||||||.|||||||||||||.||.||||||||||||.|.|||||||||||.|||||.
Sbjct 221 CCACCAAACAGCTACACAGACACCTGGGCTTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTCTCAAT 294
Query 268 AGGCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGC 341
||||||||||||||.|||||||||||.||.|.||||||.||||||||||||||.||||||||.||.||.||.||
Sbjct 295 AGGCTGCTGGTGCTCTGTGACAACTCTATAACCCTGGTTAACATGCTGAACCTGGAGCCAGTCCCCTCAGGAGC 368
Query 342 CCGCATCAAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCTGTGAGTGGGGACCCCTTCTGTGTAGAAGTTT 415
|||||||||.|||||..|.||.||||||.|||||||||.|||.||||.|||||||||.|||||.||.||.||.|
Sbjct 369 CCGCATCAAAGGGGCTACAACATTTGCAGTGAACGAGAGCCCCGTGAATGGGGACCCGTTCTGCGTGGAGGTGT 442
Query 416 GCATCATCTCTGTCAAACGCAGAACCATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAG 489
|||||||.||.||.||.|||||.||..||||.||||||||||||||.||||||||.||||||||.||||||||.
Sbjct 443 GCATCATTTCCGTGAAGCGCAGGACTGTCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAA 516
Query 490 GTGTCGACTGCCGAACAGCCCCTCGCTGTGGCTGTGGACGGCCACTTCCTGTGTCTGGCTCTGACCACTCAGTA 563
|||||.||..|.||.|||||.||.||||||||||||||.|||.|.|||.||||.|||||..|||||||.||.||
Sbjct 517 GTGTCCACCCCAGAGCAGCCTCTTGCTGTGGCTGTGGATGGCTATTTCTTGTGCCTGGCCTTGACCACACAATA 590
Query 564 CATCATCCACAATTACAGCACAGGCGTCTCCCAGGACCTTTTTCCCTACTGCAGTGAGGAGAGGCCGCCGATCG 637
||||||||..||.||||||||||||.|.|||||||||||.||||||||||||||||||||||.|||.||.||||
Sbjct 591 CATCATCCTGAACTACAGCACAGGCCTTTCCCAGGACCTGTTTCCCTACTGCAGTGAGGAGAAGCCACCCATCG 664
Query 638 TCAAGAGGATAGGGAGACAGGAGTTCCTGCTGGCGGGCCCCGGAGGGCTGGGCATGTTTGCCACAGTCGCAGGG 711
|||||||||||||.||||||||||||||||||||.|||||.|||||..||||||||||||||||.||.||.|||
Sbjct 665 TCAAGAGGATAGGCAGACAGGAGTTCCTGCTGGCTGGCCCAGGAGGCTTGGGCATGTTTGCCACCGTGGCCGGG 738
Query 712 ATATCCCAGCGTGCCCCCGTGCACTGGTCGGAGAATGTGATTGGGGCGGCTGTGTCCTTTCCATACGTCATAGC 785
||.||||||||||||||.|||||||||||.||.||||||||||||||.|||||.|.|||.||.||.||||||||
Sbjct 739 ATTTCCCAGCGTGCCCCTGTGCACTGGTCAGAAAATGTGATTGGGGCAGCTGTTTGCTTCCCCTATGTCATAGC 812
Query 786 GCTCGATGACGAATTCATCACAGTCCACAGCATGTTGGATCAGCAACAGAAGCAGACGCTGCCCTTTAAGGAGG 859
||||||||||||||||||||||||.||||||||||||||||||||.|||||.|||||.||||||||||||||||
Sbjct 813 GCTCGATGACGAATTCATCACAGTTCACAGCATGTTGGATCAGCAGCAGAAACAGACCCTGCCCTTTAAGGAGG 886
Query 860 GCCATATCCTACAGGACTTTGAAGGAAGAGTGATCGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTA 933
|.||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct 887 GGCACATCCTGCAGGACTTTGAAGGAAGAGTGATTGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTA 960
Query 934 CCTTTGGAAAAACAAATACAGGATCTTCTAGCAAGCCGCAGAGTAGAAGAGGCTTTGGTTTTAGCAAAAGGAGC 1007
|||.||||||||||||||||||||||..||||||.|||.|||||.||.|||||||||||.||.|||||||||||
Sbjct 961 CCTCTGGAAAAACAAATACAGGATCTGTTAGCAAACCGGAGAGTGGAGGAGGCTTTGGTCTTGGCAAAAGGAGC 1034
Query 1008 CCGGAGGAACATTCCAAAGGAAAAATTTCAGGTAATGTACAGAAGGATTCTGCAGCAGGCGGGATTTATACAGT 1081
|||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.||.||||||||||
Sbjct 1035 CCGGAGGAACATTCCAAAGGAGAAATTTCAGGTAATGTACAGGAGGATTCTGCAGCAGGCAGGCTTTATACAGT 1108
Query 1082 TTGCACAACTTCAGTTCCTGGAAGCTAAAGAGCTCTTCAGAAGCGGCCAGCTTGATGTCCGGGAGCTGATCTCT 1155
||||||||||.||||||||||||||.||||||||||||||||||.|||||||.|||||||||||||||||||||
Sbjct 1109 TTGCACAACTCCAGTTCCTGGAAGCCAAAGAGCTCTTCAGAAGCAGCCAGCTGGATGTCCGGGAGCTGATCTCT 1182
Query 1156 CTCTACCCCTTCCTGTTGCCCACCTCCTCCTCCTTCACCCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCT 1229
|||||||||||.|||.|||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct 1183 CTCTACCCCTTTCTGCTGCCCACCTCCTCCTCCTTCACCCGCTCTCACCCTCCTCTTCATGAGTACGCAGACCT 1256
Query 1230 GAACCAGCTGACCCAGGGGGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACGAGG 1303
|||||||||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||.||..
Sbjct 1257 GAACCAGCTGACCCAAGGTGACCAGGAGAAGATGGCCAAGTGCAAGCGCTTCCTCATGAGCTACCTGAATGAAA 1330
Query 1304 TCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCT 1377
|||||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||.|||||||||||||||
Sbjct 1331 TCCGCAGCACAGAGGTAGCTAATGGCTACAAGGAAGACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGCT 1404
Query 1378 GACCACGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTCTT-CTGACGGACAGTGCTGCCTGGCTAG 1450
||||||||||||||.|||||||||.|||||||||||||.||||| ||| |||||.|||||||||||||||||.|
Sbjct 1405 GACCACGACAGCCTCCTGGACCTCTTGGTCACTGAGAATTTCTG-CTTGCTGACAGACAGTGCTGCCTGGCTGG 1477
Query 1451 AGAAGCACAAAAAGTATTTTGCACTTGGACTGCTCTATCATTATAATAACCAAGATGCTGCTGCAGTTCAGTTG 1524
||||||||||||||||.||||||||.||.||||||||||||||.||.||.||||||||..||||.|||||||||
Sbjct 1478 AGAAGCACAAAAAGTACTTTGCACTGGGGCTGCTCTATCATTACAACAAACAAGATGCCTCTGCGGTTCAGTTG 1551
Query 1525 TGGGTGAACATTGTGAATGGCGATGTCCAGGACTCCACACGCTCAGACCTGTATGAATACATCGTGGATTTTCT 1598
||||||||||||||||||||.||..||||||||||.||||||||.||||||||||||||||||||.|||||.||
Sbjct 1552 TGGGTGAACATTGTGAATGGGGACATCCAGGACTCTACACGCTCGGACCTGTATGAATACATCGTTGATTTCCT 1625
Query 1599 TACCTACTGCTTAGACGAGGAACTAGTGTGGGCCTATGCTGATTGGGTCCTGCAGAAAAGTGAAGAGGTCGGAG 1672
||||||||||.|||||.|.||.||.||||||.||.|||||||.|||.|.|||||||||| .|.||||
Sbjct 1626 TACCTACTGCCTAGACCAAGAGCTGGTGTGGACCCATGCTGACTGGCTGCTGCAGAAAA--------ATTGGAG 1691
Query 1673 TTCAGGTTTTCACCAAGAGACCTTTGGATGAACAGCAGAAGAACAGTTTTAATCCAGACGACATTATCAATTGC 1746
||||..||||||||||||||||||||||.||.|||||| |||||
Sbjct 1692 TTCAAATTTTCACCAAGAGACCTTTGGACGAGCAGCAG----------------CAGAC--------------- 1734
Query 1747 CTTAAAAAATACCCTAAAGCCCTTGTGAAGTATCTGGAACATCTTGTGATAGACAAGAGACTGCAGAAAGAAGA 1820
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 1821 GTATCACACCCACTTAGCTGTGCTGTACCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTG 1894
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 1895 CAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATACCGAGTCCACTTTCTT 1968
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 1969 CTCGAGAGGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAA 2042
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 2043 GGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGG 2116
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 2117 GCCGAGACCCACCCCACCGCCAGCAACTCTTTCACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACTGCC 2190
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 2191 CACGAGCTGGCCGTGGCTGCCGTGGACCTGCTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCA 2264
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 2265 GATGCTGCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATTCCTGATGGGGGCCATGAGGGACAGCATCCATG 2338
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 2339 CCAGGAGGACCATGCAGGTGGCTCTCGGCCTGGCCAGGTCCGAAAACTTAATCTACACCTACGATAAGATGAAG 2412
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 2413 TTGAAAGGAAGCTCAATCCAACTCTCAGACAAAAAGCTTTGTCAGATATGCCAAAATCCCTTTTGTGAGCCTGT 2486
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 2487 GTTTGTTAGATACCCAAATGGTGGTCTTGTGCACACCCACTGTGCCGCCAGCAGACACACAAACCCCAGCTCAT 2560
Sbjct 1735 -------------------------------------------------------------------------- 1734
Query 2561 CCAGTCCTGGCACTCGGACT 2580
Sbjct 1735 -------------------- 1734
