Nucleotide Global Alignment

Description

Query:
TRCN0000466541
Subject:
XM_017312455.1
Aligned Length:
2610
Identities:
1508
Gaps:
906

Alignment

Query    1  ---------------------------ATGATGAGCATCAAAGCCTTTACGCTT-GTCTCTGCTGTGGAGCGGG  46
                                       |||||||.||||||.|||||.|| ||| ||||||||.|||||.||||
Sbjct    1  ATGACTGGGCCAGATCACCCGGTAGACATGATGAACATCAAGGCCTTCAC-CTTGGTCTCTGCAGTGGAACGGG  73

Query   47  AGCTGCTGATGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGC  120
            |.||||||||||||||||..||.|.|.|||.|||.|||||.|||||||||||.||||||.|.||.||.||.|||
Sbjct   74  AACTGCTGATGGGCGACAGAGACCACATCAGCATTGAGTGTGTGGAGTGCTGTGGCAGGAATCTTTATGTCGGC  147

Query  121  ACCAACGACTGCTTCGTCTACCACTTCCTGTTGGAGGAG-AGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTG  193
            |||||.|||||||||.|.|||||.||||||.|||||||| |||||| |||||.|.|||.||||.||.|||..||
Sbjct  148  ACCAATGACTGCTTCATTTACCATTTCCTGCTGGAGGAGAAGGCCA-TGCCTACAGGGACAGCTACATTCGTTG  220

Query  194  CCACCAAACAGCTGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGAGCTGCGCGCGGCCTCAGCACTCAAC  267
            |||||||||||||.||.||||||.|||||||||||||.||.||||||||||||.|.|||||||||||.|||||.
Sbjct  221  CCACCAAACAGCTACACAGACACCTGGGCTTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTCTCAAT  294

Query  268  AGGCTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGC  341
            ||||||||||||||.|||||||||||.||.|.||||||.||||||||||||||.||||||||.||.||.||.||
Sbjct  295  AGGCTGCTGGTGCTCTGTGACAACTCTATAACCCTGGTTAACATGCTGAACCTGGAGCCAGTCCCCTCAGGAGC  368

Query  342  CCGCATCAAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCTGTGAGTGGGGACCCCTTCTGTGTAGAAGTTT  415
            |||||||||.|||||..|.||.||||||.|||||||||.|||.||||.|||||||||.|||||.||.||.||.|
Sbjct  369  CCGCATCAAAGGGGCTACAACATTTGCAGTGAACGAGAGCCCCGTGAATGGGGACCCGTTCTGCGTGGAGGTGT  442

Query  416  GCATCATCTCTGTCAAACGCAGAACCATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAG  489
            |||||||.||.||.||.|||||.||..||||.||||||||||||||.||||||||.||||||||.||||||||.
Sbjct  443  GCATCATTTCCGTGAAGCGCAGGACTGTCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAA  516

Query  490  GTGTCGACTGCCGAACAGCCCCTCGCTGTGGCTGTGGACGGCCACTTCCTGTGTCTGGCTCTGACCACTCAGTA  563
            |||||.||..|.||.|||||.||.||||||||||||||.|||.|.|||.||||.|||||..|||||||.||.||
Sbjct  517  GTGTCCACCCCAGAGCAGCCTCTTGCTGTGGCTGTGGATGGCTATTTCTTGTGCCTGGCCTTGACCACACAATA  590

Query  564  CATCATCCACAATTACAGCACAGGCGTCTCCCAGGACCTTTTTCCCTACTGCAGTGAGGAGAGGCCGCCGATCG  637
            ||||||||..||.||||||||||||.|.|||||||||||.||||||||||||||||||||||.|||.||.||||
Sbjct  591  CATCATCCTGAACTACAGCACAGGCCTTTCCCAGGACCTGTTTCCCTACTGCAGTGAGGAGAAGCCACCCATCG  664

Query  638  TCAAGAGGATAGGGAGACAGGAGTTCCTGCTGGCGGGCCCCGGAGGGCTGGGCATGTTTGCCACAGTCGCAGGG  711
            |||||||||||||.||||||||||||||||||||.|||||.|||||..||||||||||||||||.||.||.|||
Sbjct  665  TCAAGAGGATAGGCAGACAGGAGTTCCTGCTGGCTGGCCCAGGAGGCTTGGGCATGTTTGCCACCGTGGCCGGG  738

Query  712  ATATCCCAGCGTGCCCCCGTGCACTGGTCGGAGAATGTGATTGGGGCGGCTGTGTCCTTTCCATACGTCATAGC  785
            ||.||||||||||||||.|||||||||||.||.||||||||||||||.|||||.|.|||.||.||.||||||||
Sbjct  739  ATTTCCCAGCGTGCCCCTGTGCACTGGTCAGAAAATGTGATTGGGGCAGCTGTTTGCTTCCCCTATGTCATAGC  812

Query  786  GCTCGATGACGAATTCATCACAGTCCACAGCATGTTGGATCAGCAACAGAAGCAGACGCTGCCCTTTAAGGAGG  859
            ||||||||||||||||||||||||.||||||||||||||||||||.|||||.|||||.||||||||||||||||
Sbjct  813  GCTCGATGACGAATTCATCACAGTTCACAGCATGTTGGATCAGCAGCAGAAACAGACCCTGCCCTTTAAGGAGG  886

Query  860  GCCATATCCTACAGGACTTTGAAGGAAGAGTGATCGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTA  933
            |.||.|||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  887  GGCACATCCTGCAGGACTTTGAAGGAAGAGTGATTGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTA  960

Query  934  CCTTTGGAAAAACAAATACAGGATCTTCTAGCAAGCCGCAGAGTAGAAGAGGCTTTGGTTTTAGCAAAAGGAGC  1007
            |||.||||||||||||||||||||||..||||||.|||.|||||.||.|||||||||||.||.|||||||||||
Sbjct  961  CCTCTGGAAAAACAAATACAGGATCTGTTAGCAAACCGGAGAGTGGAGGAGGCTTTGGTCTTGGCAAAAGGAGC  1034

Query 1008  CCGGAGGAACATTCCAAAGGAAAAATTTCAGGTAATGTACAGAAGGATTCTGCAGCAGGCGGGATTTATACAGT  1081
            |||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.||.||||||||||
Sbjct 1035  CCGGAGGAACATTCCAAAGGAGAAATTTCAGGTAATGTACAGGAGGATTCTGCAGCAGGCAGGCTTTATACAGT  1108

Query 1082  TTGCACAACTTCAGTTCCTGGAAGCTAAAGAGCTCTTCAGAAGCGGCCAGCTTGATGTCCGGGAGCTGATCTCT  1155
            ||||||||||.||||||||||||||.||||||||||||||||||.|||||||.|||||||||||||||||||||
Sbjct 1109  TTGCACAACTCCAGTTCCTGGAAGCCAAAGAGCTCTTCAGAAGCAGCCAGCTGGATGTCCGGGAGCTGATCTCT  1182

Query 1156  CTCTACCCCTTCCTGTTGCCCACCTCCTCCTCCTTCACCCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCT  1229
            |||||||||||.|||.|||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||
Sbjct 1183  CTCTACCCCTTTCTGCTGCCCACCTCCTCCTCCTTCACCCGCTCTCACCCTCCTCTTCATGAGTACGCAGACCT  1256

Query 1230  GAACCAGCTGACCCAGGGGGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACGAGG  1303
            |||||||||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||.||..
Sbjct 1257  GAACCAGCTGACCCAAGGTGACCAGGAGAAGATGGCCAAGTGCAAGCGCTTCCTCATGAGCTACCTGAATGAAA  1330

Query 1304  TCCGCAGCACAGAGGTAGCAAATGGCTACAAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCT  1377
            |||||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||.|||||||||||||||
Sbjct 1331  TCCGCAGCACAGAGGTAGCTAATGGCTACAAGGAAGACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGCT  1404

Query 1378  GACCACGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTCTT-CTGACGGACAGTGCTGCCTGGCTAG  1450
            ||||||||||||||.|||||||||.|||||||||||||.||||| ||| |||||.|||||||||||||||||.|
Sbjct 1405  GACCACGACAGCCTCCTGGACCTCTTGGTCACTGAGAATTTCTG-CTTGCTGACAGACAGTGCTGCCTGGCTGG  1477

Query 1451  AGAAGCACAAAAAGTATTTTGCACTTGGACTGCTCTATCATTATAATAACCAAGATGCTGCTGCAGTTCAGTTG  1524
            ||||||||||||||||.||||||||.||.||||||||||||||.||.||.||||||||..||||.|||||||||
Sbjct 1478  AGAAGCACAAAAAGTACTTTGCACTGGGGCTGCTCTATCATTACAACAAACAAGATGCCTCTGCGGTTCAGTTG  1551

Query 1525  TGGGTGAACATTGTGAATGGCGATGTCCAGGACTCCACACGCTCAGACCTGTATGAATACATCGTGGATTTTCT  1598
            ||||||||||||||||||||.||..||||||||||.||||||||.||||||||||||||||||||.|||||.||
Sbjct 1552  TGGGTGAACATTGTGAATGGGGACATCCAGGACTCTACACGCTCGGACCTGTATGAATACATCGTTGATTTCCT  1625

Query 1599  TACCTACTGCTTAGACGAGGAACTAGTGTGGGCCTATGCTGATTGGGTCCTGCAGAAAAGTGAAGAGGTCGGAG  1672
            ||||||||||.|||||.|.||.||.||||||.||.|||||||.|||.|.||||||||||        .|.||||
Sbjct 1626  TACCTACTGCCTAGACCAAGAGCTGGTGTGGACCCATGCTGACTGGCTGCTGCAGAAAA--------ATTGGAG  1691

Query 1673  TTCAGGTTTTCACCAAGAGACCTTTGGATGAACAGCAGAAGAACAGTTTTAATCCAGACGACATTATCAATTGC  1746
            ||||..||||||||||||||||||||||.||.||||||                |||||               
Sbjct 1692  TTCAAATTTTCACCAAGAGACCTTTGGACGAGCAGCAG----------------CAGAC---------------  1734

Query 1747  CTTAAAAAATACCCTAAAGCCCTTGTGAAGTATCTGGAACATCTTGTGATAGACAAGAGACTGCAGAAAGAAGA  1820
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 1821  GTATCACACCCACTTAGCTGTGCTGTACCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTG  1894
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 1895  CAGAGGCCACCGAGACGCAGGCCAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATACCGAGTCCACTTTCTT  1968
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 1969  CTCGAGAGGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAA  2042
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2043  GGCGCTGCATATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGG  2116
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2117  GCCGAGACCCACCCCACCGCCAGCAACTCTTTCACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACTGCC  2190
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2191  CACGAGCTGGCCGTGGCTGCCGTGGACCTGCTGAACCGCCACGCCACCGAATTTGATGCAGCCCAGGTGCTGCA  2264
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2265  GATGCTGCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATTCCTGATGGGGGCCATGAGGGACAGCATCCATG  2338
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2339  CCAGGAGGACCATGCAGGTGGCTCTCGGCCTGGCCAGGTCCGAAAACTTAATCTACACCTACGATAAGATGAAG  2412
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2413  TTGAAAGGAAGCTCAATCCAACTCTCAGACAAAAAGCTTTGTCAGATATGCCAAAATCCCTTTTGTGAGCCTGT  2486
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2487  GTTTGTTAGATACCCAAATGGTGGTCTTGTGCACACCCACTGTGCCGCCAGCAGACACACAAACCCCAGCTCAT  2560
                                                                                      
Sbjct 1735  --------------------------------------------------------------------------  1734

Query 2561  CCAGTCCTGGCACTCGGACT  2580
                                
Sbjct 1735  --------------------  1734

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