Nucleotide Global Alignment

Description

Query:
TRCN0000466542
Subject:
XR_001738699.1
Aligned Length:
1941
Identities:
1157
Gaps:
784

Alignment

Query    1  ------------------------------------------------------------------ATGCCAGG  8
                                                                              ||||||||
Sbjct    1  ATTGTGACCAGAGGGGTTTGTGTGGCTGAAGAGGCAGGAGGAACAGTGTATCCACAGCGTGGGACCATGCCAGG  74

Query    9  CACAAAACGGTTTCAACATGTCATTGAGACCCCGGAGCCTGGCAAGTGGGAGTTGTCTGGGTACGAGGCAGCTG  82
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CACAAAACGGTTTCAACATGTCATTGAGACCCCGGAGCCTGGCAAGTGGGAGTTGTCTGGGTACGAGGCAGCTG  148

Query   83  TGCCAATCACGGAGAAGTCAAACCCACTGACCCAGGATCTAGACAAAGCAGATGCTGAGAACATTGTTCGACTG  156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCCAATCACGGAGAAGTCAAACCCACTGACCCAGGATCTAGACAAAGCAGATGCTGAGAACATTGTTCGACTG  222

Query  157  CTAGGGCAATGTGATGCTGAGATCTTCCAGGAGGAGGGGCAAGCCCTGTCCACATACCAGAGACTCTACAGCGA  230
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CTAGGGCAATGTGATGCTGAGATCTTCCAGGAGGAGGGGCAAGCCCTGTCCACATACCAGAGACTCTACAGCGA  296

Query  231  ATCCATTCTGACCACCATGGTACAGGTGGCTGGGAAAGTTCAGGAAGTGCTGAAGGAGCCAGATGGGGGGCTGG  304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ATCCATTCTGACCACCATGGTACAGGTGGCTGGGAAAGTTCAGGAAGTGCTGAAGGAGCCAGATGGGGGGCTGG  370

Query  305  TTGTGCTGAGTGGAGGGGGCACCTCTGGCCGGATGGCATTCCTCATGTCGGTGTCCTTTAATCAGCTGATGAAA  378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTGTGCTGAGTGGAGGGGGCACCTCTGGCCGGATGGCATTCCTCATGTCGGTGTCCTTTAATCAGCTGATGAAA  444

Query  379  GGTCTGGGACAGAAACCTCTTTACACCTACCTCATTGCAGGTGGTGACAGGTCTGTGGTGGCCTCTAGGGAGGG  452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGTCTGGGACAGAAACCTCTTTACACCTACCTCATTGCAGGTGGTGACAGGTCTGTGGTGGCCTCTAGGGAGGG  518

Query  453  GACAGAAGATAGTGCCTTGCACGGGATTGAGGAACTGAAGAAGGTGGCTGCCGGGAAGAAGAGAGTGATTGTCA  526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GACAGAAGATAGTGCCTTGCACGGGATTGAGGAACTGAAGAAGGTGGCTGCCGGGAAGAAGAGAGTGATTGTCA  592

Query  527  TTGGCATTTCTGTGGGACTCTCTGCTCCCTTTGTGGCAGGCCAGATGGACTGCTGCATGAACAACACAGCTGTC  600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTGGCATTTCTGTGGGACTCTCTGCTCCCTTTGTGGCAGGCCAGATGGACTGCTGCATGAACAACACAGCTGTC  666

Query  601  TTCTTGCCAGTCCTGGTTGGCTTCAATCCAGTGAGCATGGCCAGAAATGACCCCATTGAAGACTGGAGTTCAAC  674
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTCTTGCCAGTCCTGGTTGGCTTCAATCCAGTGAGCATGGCCAGAAATGACCCCATTGAAGACTGGAGTTCAAC  740

Query  675  ATTCCGACAAGTAGCAGAGCGGATGCAGAAAATGCAGGAGAAACAGAAAGCTTTTGTGCTCAATCCTGCCATCG  748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATTCCGACAAGTAGCAGAGCGGATGCAGAAAATGCAGGAGAAACAGAAAGCTTTTGTGCTCAATCCTGCCATCG  814

Query  749  GGCCCGAGGGTCTCAGCGGCTCCTCCCGGATGAAAGGTGGAAGTGCCACCAAGATTCTGCTGGAAACCCTGTTA  822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGCCCGAGGGTCTCAGCGGCTCCTCCCGGATGAAAGGTGGAAGTGCCACCAAGATTCTGCTGGAAACCCTGTTA  888

Query  823  TTAGCAGCCCATAAGACTGTGGACCAGGGCATTGCAGCATCTCAAAGATGCCTCCTGGAAATCTTGCGGACATT  896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TTAGCAGCCCATAAGACTGTGGACCAGGGCATTGCAGCATCTCAAAGATGCCTCCTGGAAATCTTGCGGACATT  962

Query  897  TGAGCGAGCTCATCAGGTGACCTACAGCCAAAGCCCCAAGATTGCCACCCTGATGAAGAGTGTCAGCACCAGTC  970
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct  963  TGAGCGAGCTCATCAGGTGACCTACAGCCAAAGCCCCAAGATTGCCACCCTGATGAAGAGTGTCAGC-------  1029

Query  971  TGGAGAAGAAAGGCCACGTGTACCTGGTTGGCTGGCAGACCCTGGGCATCATTGCCATCATGGATGGAGTAGAG  1044
                                                                                      
Sbjct 1030  --------------------------------------------------------------------------  1029

Query 1045  TGCATCCACACCTTTGGTGCTGATTTCCGAGATGTCCGTGGCTTTCTCATTGGTGATCACAGTGACATGTTTAA  1118
                                                                                      
Sbjct 1030  --------------------------------------------------------------------------  1029

Query 1119  CCAGAAGGCTGAGCTCACCAACCAGGGTCCCCAGTTCACCTTCTCCCAGGAGGACTTCCTGACTTCCATCCTTC  1192
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1030  --------------------ACCAGGGTCCCCAGTTCACCTTCTCCCAGGAGGACTTCCTGACTTCCATCCTTC  1083

Query 1193  CCTCTCTCACGGAAATCGATACTGTGGTCTTCATTTTCACCCTGGATGACAACCTCACGGAGGTGCAGACTATA  1266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084  CCTCTCTCACGGAAATCGATACTGTGGTCTTCATTTTCACCCTGGATGACAACCTCACGGAGGTGCAGACTATA  1157

Query 1267  GTGGAGCAGGTGAAAGAGAAGACCAACCACATCCAGGCCCTGGCACACAGCACCGTGGGTCAGACCTTGCCGAT  1340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct 1158  GTGGAGCAGGTGAAAGAGAAGACCAACCACATCCAGGCCCTGGCACACAGCACCGTGGGTCAGACC--------  1223

Query 1341  CCCTCTGAAGAAGCTCTTTCCCTCCATCATCAGCATCACATGGCCACTGCTTTTCTTTGAATATGAAGGGAACT  1414
                                                                                      
Sbjct 1224  --------------------------------------------------------------------------  1223

Query 1415  TCATCCAGAAGTTCCAGCGTGAGCTAAGCACCAAATGGGTGCTGAATACAGTGAGTACAGGTGCTCATGTGCTT  1488
                                                                                      
Sbjct 1224  --------------------------------------------------------------------------  1223

Query 1489  CTTGGTAAGATCCTACAAAACCACATGTTGGACCTTCGGATTAGCAACTCCAAGCTCTTCTGGCGGGCGCTGGC  1562
                                                                                      
Sbjct 1224  --------------------------------------------------------------------------  1223

Query 1563  CATGCTGCAGCGGTTCTCTGGACAGTCCAAGGCTCGATGCATCGAGAGCCTCCTCCGAGCGATCCACTTTCCCC  1636
                                                                                      
Sbjct 1224  --------------------------------------------------------------------------  1223

Query 1637  AGCCACTGTCAGATGATATTCGGGCTGCTCCCATCTCCTGCCATGTCCAGGTTGCACATGAGAAGGAACAGGTG  1710
                                                                                      
Sbjct 1224  --------------------------------------------------------------------------  1223

Query 1711  ATACCCATCGCCTTGCTGAGCCTCCTATTCCGGTGCTCGATCACTGAGGCTCAGGCACACCTGGCTGCAGCTCC  1784
                                                                                      
Sbjct 1224  --------------------------------------------------------------------------  1223

Query 1785  TTCTGTCTGTGAGGCTGTCAGGAGTGCTCTTGCTGGGCCAGGTCAGAAGCGCACTGCGGACCCCCTCGAGATCC  1858
                                                                                      
Sbjct 1224  --------------------------------------------------------------------------  1223

Query 1859  TAGAGCCTGACGTTCAG  1875
                             
Sbjct 1224  -----------------  1223

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