Nucleotide Global Alignment
Description
- Query:
- TRCN0000466542
- Subject:
- XR_001738699.1
- Aligned Length:
- 1941
- Identities:
- 1157
- Gaps:
- 784
Alignment
Query 1 ------------------------------------------------------------------ATGCCAGG 8
||||||||
Sbjct 1 ATTGTGACCAGAGGGGTTTGTGTGGCTGAAGAGGCAGGAGGAACAGTGTATCCACAGCGTGGGACCATGCCAGG 74
Query 9 CACAAAACGGTTTCAACATGTCATTGAGACCCCGGAGCCTGGCAAGTGGGAGTTGTCTGGGTACGAGGCAGCTG 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CACAAAACGGTTTCAACATGTCATTGAGACCCCGGAGCCTGGCAAGTGGGAGTTGTCTGGGTACGAGGCAGCTG 148
Query 83 TGCCAATCACGGAGAAGTCAAACCCACTGACCCAGGATCTAGACAAAGCAGATGCTGAGAACATTGTTCGACTG 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGCCAATCACGGAGAAGTCAAACCCACTGACCCAGGATCTAGACAAAGCAGATGCTGAGAACATTGTTCGACTG 222
Query 157 CTAGGGCAATGTGATGCTGAGATCTTCCAGGAGGAGGGGCAAGCCCTGTCCACATACCAGAGACTCTACAGCGA 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTAGGGCAATGTGATGCTGAGATCTTCCAGGAGGAGGGGCAAGCCCTGTCCACATACCAGAGACTCTACAGCGA 296
Query 231 ATCCATTCTGACCACCATGGTACAGGTGGCTGGGAAAGTTCAGGAAGTGCTGAAGGAGCCAGATGGGGGGCTGG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATCCATTCTGACCACCATGGTACAGGTGGCTGGGAAAGTTCAGGAAGTGCTGAAGGAGCCAGATGGGGGGCTGG 370
Query 305 TTGTGCTGAGTGGAGGGGGCACCTCTGGCCGGATGGCATTCCTCATGTCGGTGTCCTTTAATCAGCTGATGAAA 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTGTGCTGAGTGGAGGGGGCACCTCTGGCCGGATGGCATTCCTCATGTCGGTGTCCTTTAATCAGCTGATGAAA 444
Query 379 GGTCTGGGACAGAAACCTCTTTACACCTACCTCATTGCAGGTGGTGACAGGTCTGTGGTGGCCTCTAGGGAGGG 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGTCTGGGACAGAAACCTCTTTACACCTACCTCATTGCAGGTGGTGACAGGTCTGTGGTGGCCTCTAGGGAGGG 518
Query 453 GACAGAAGATAGTGCCTTGCACGGGATTGAGGAACTGAAGAAGGTGGCTGCCGGGAAGAAGAGAGTGATTGTCA 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GACAGAAGATAGTGCCTTGCACGGGATTGAGGAACTGAAGAAGGTGGCTGCCGGGAAGAAGAGAGTGATTGTCA 592
Query 527 TTGGCATTTCTGTGGGACTCTCTGCTCCCTTTGTGGCAGGCCAGATGGACTGCTGCATGAACAACACAGCTGTC 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTGGCATTTCTGTGGGACTCTCTGCTCCCTTTGTGGCAGGCCAGATGGACTGCTGCATGAACAACACAGCTGTC 666
Query 601 TTCTTGCCAGTCCTGGTTGGCTTCAATCCAGTGAGCATGGCCAGAAATGACCCCATTGAAGACTGGAGTTCAAC 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCTTGCCAGTCCTGGTTGGCTTCAATCCAGTGAGCATGGCCAGAAATGACCCCATTGAAGACTGGAGTTCAAC 740
Query 675 ATTCCGACAAGTAGCAGAGCGGATGCAGAAAATGCAGGAGAAACAGAAAGCTTTTGTGCTCAATCCTGCCATCG 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTCCGACAAGTAGCAGAGCGGATGCAGAAAATGCAGGAGAAACAGAAAGCTTTTGTGCTCAATCCTGCCATCG 814
Query 749 GGCCCGAGGGTCTCAGCGGCTCCTCCCGGATGAAAGGTGGAAGTGCCACCAAGATTCTGCTGGAAACCCTGTTA 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GGCCCGAGGGTCTCAGCGGCTCCTCCCGGATGAAAGGTGGAAGTGCCACCAAGATTCTGCTGGAAACCCTGTTA 888
Query 823 TTAGCAGCCCATAAGACTGTGGACCAGGGCATTGCAGCATCTCAAAGATGCCTCCTGGAAATCTTGCGGACATT 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTAGCAGCCCATAAGACTGTGGACCAGGGCATTGCAGCATCTCAAAGATGCCTCCTGGAAATCTTGCGGACATT 962
Query 897 TGAGCGAGCTCATCAGGTGACCTACAGCCAAAGCCCCAAGATTGCCACCCTGATGAAGAGTGTCAGCACCAGTC 970
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGAGCGAGCTCATCAGGTGACCTACAGCCAAAGCCCCAAGATTGCCACCCTGATGAAGAGTGTCAGC------- 1029
Query 971 TGGAGAAGAAAGGCCACGTGTACCTGGTTGGCTGGCAGACCCTGGGCATCATTGCCATCATGGATGGAGTAGAG 1044
Sbjct 1030 -------------------------------------------------------------------------- 1029
Query 1045 TGCATCCACACCTTTGGTGCTGATTTCCGAGATGTCCGTGGCTTTCTCATTGGTGATCACAGTGACATGTTTAA 1118
Sbjct 1030 -------------------------------------------------------------------------- 1029
Query 1119 CCAGAAGGCTGAGCTCACCAACCAGGGTCCCCAGTTCACCTTCTCCCAGGAGGACTTCCTGACTTCCATCCTTC 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1030 --------------------ACCAGGGTCCCCAGTTCACCTTCTCCCAGGAGGACTTCCTGACTTCCATCCTTC 1083
Query 1193 CCTCTCTCACGGAAATCGATACTGTGGTCTTCATTTTCACCCTGGATGACAACCTCACGGAGGTGCAGACTATA 1266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 CCTCTCTCACGGAAATCGATACTGTGGTCTTCATTTTCACCCTGGATGACAACCTCACGGAGGTGCAGACTATA 1157
Query 1267 GTGGAGCAGGTGAAAGAGAAGACCAACCACATCCAGGCCCTGGCACACAGCACCGTGGGTCAGACCTTGCCGAT 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1158 GTGGAGCAGGTGAAAGAGAAGACCAACCACATCCAGGCCCTGGCACACAGCACCGTGGGTCAGACC-------- 1223
Query 1341 CCCTCTGAAGAAGCTCTTTCCCTCCATCATCAGCATCACATGGCCACTGCTTTTCTTTGAATATGAAGGGAACT 1414
Sbjct 1224 -------------------------------------------------------------------------- 1223
Query 1415 TCATCCAGAAGTTCCAGCGTGAGCTAAGCACCAAATGGGTGCTGAATACAGTGAGTACAGGTGCTCATGTGCTT 1488
Sbjct 1224 -------------------------------------------------------------------------- 1223
Query 1489 CTTGGTAAGATCCTACAAAACCACATGTTGGACCTTCGGATTAGCAACTCCAAGCTCTTCTGGCGGGCGCTGGC 1562
Sbjct 1224 -------------------------------------------------------------------------- 1223
Query 1563 CATGCTGCAGCGGTTCTCTGGACAGTCCAAGGCTCGATGCATCGAGAGCCTCCTCCGAGCGATCCACTTTCCCC 1636
Sbjct 1224 -------------------------------------------------------------------------- 1223
Query 1637 AGCCACTGTCAGATGATATTCGGGCTGCTCCCATCTCCTGCCATGTCCAGGTTGCACATGAGAAGGAACAGGTG 1710
Sbjct 1224 -------------------------------------------------------------------------- 1223
Query 1711 ATACCCATCGCCTTGCTGAGCCTCCTATTCCGGTGCTCGATCACTGAGGCTCAGGCACACCTGGCTGCAGCTCC 1784
Sbjct 1224 -------------------------------------------------------------------------- 1223
Query 1785 TTCTGTCTGTGAGGCTGTCAGGAGTGCTCTTGCTGGGCCAGGTCAGAAGCGCACTGCGGACCCCCTCGAGATCC 1858
Sbjct 1224 -------------------------------------------------------------------------- 1223
Query 1859 TAGAGCCTGACGTTCAG 1875
Sbjct 1224 ----------------- 1223
