Nucleotide Global Alignment

Description

Query:
TRCN0000466550
Subject:
NR_163905.1
Aligned Length:
3116
Identities:
1935
Gaps:
1181

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGTCGCTAAGGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGA  74

Query    1  -----------------------ATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG  51
                                   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGCCGCGCTCCGCCCCCGCTACCATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG  148

Query   52  CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAG--------------------------------------  87
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct  149  CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAGGATGAAGTGTCACTCTGTCACCCAGGCTGGAATGCAAT  222

Query   88  --------------------------------------------------------------------------  87
                                                                                      
Sbjct  223  GGCGCGATCTCGGCTCACTGTAACCTCCGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCGAGTAGC  296

Query   88  --------------------------------------------------------------------------  87
                                                                                      
Sbjct  297  TGGGACTACAGGCGCGTGCCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGATTGGGTTTCACCATATTG  370

Query   88  --------------------------------------------------------------------------  87
                                                                                      
Sbjct  371  GCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAAGTGT  444

Query   88  --------------------------------------------------------------------------  87
                                                                                      
Sbjct  445  GAGCCACCGCGCCCGGCCAGGAAAGTTTTAAGGAGAGTCACCACCAGCTTTGTAACCAGTCTGGGTGTTTTCCA  518

Query   88  ----GATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGAGGAGGAGGAGGAGGAAGATGATGATGAGGAAG  157
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTCAGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGAGGAGGAGGAGGAGGAAGATGATGATGAGGAAG  592

Query  158  AAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCCTAAATGATGCAAACTTTGATAATTTTGTGGCT  231
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCCTAAATGATGCAAACTTTGATAATTTTGTGGCT  666

Query  232  GACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGTGGACATTGCAAGCAGTTTGCTCCGGAATATGA  305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGTGGACATTGCAAGCAGTTTGCTCCGGAATATGA  740

Query  306  AAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCGTCTG  379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCGTCTG  814

Query  380  TGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCAAGATCCTTAAGAAGGGGCAGGCTGTAGACTAC  453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCAAGATCCTTAAGAAGGGGCAGGCTGTAGACTAC  888

Query  454  GAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCCTCCACC  527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCCTCCACC  962

Query  528  AGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGATATCATTCTGGTGGAGT  601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGATATCATTCTGGTGGAGT  1036

Query  602  TTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAG  675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAGCAAG  1110

Query  676  CGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCCAAGAGGTTTGATGTCTC  749
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCCAAGAGGTTTGATGTCTC  1184

Query  750  TGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAACGGCCCACGAGAAAAATATGGAA  823
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAACGGCCCACGAGAAAAATATGGAA  1258

Query  824  TCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGGTCCAGGAGTTC  897
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGGTCCAGGAGTTC  1332

Query  898  CTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTGACCCAGCCTACCAGCAATACCA  971
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTGACCCAGCCTACCAGCAATACCA  1406

Query  972  GGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCACACTTTCAGCACAGAAATAGCAAAGTTCTTGA  1045
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCACACTTTCAGCACAGAAATAGCAAAGTTCTTGA  1480

Query 1046  AAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATG  1119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCACATG  1554

Query 1120  ATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTGG  1193
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  ATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGGTTGG  1628

Query 1194  CCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTGGTCGTCTACTACAGTGTGGACT  1267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTGGTCGTCTACTACAGTGTGGACT  1702

Query 1268  TCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAG  1341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAG  1776

Query 1342  TACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACCTGGGGCTCAGCGAGAGTGGGGA  1415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACCTGGGGCTCAGCGAGAGTGGGGA  1850

Query 1416  GGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGTTTGACTCTGACA  1489
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGTTTGACTCTGACA  1924

Query 1490  CCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAG  1563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCCCAAG  1998

Query 1564  AACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGATGGACCCCAAGAAGGACGT  1637
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  AACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGATGGACCCCAAGAAGGACGT  2072

Query 1638  CCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTACAACAGCCTGGCCAAGA  1711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  CCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTACAACAGCCTGGCCAAGA  2146

Query 1712  AGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGCCAACGACGTCCCCAGCGACCGCTAT  1785
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGCCAACGACGTCCCCAGCGACCGCTAT  2220

Query 1786  AAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGAACCCAGTTAAATTTGAGGGTGG  1859
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  AAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGAACCCAGTTAAATTTGAGGGTGG  2294

Query 1860  AGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAACTGAGCAGGACCAAGGAAGAGC  1933
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAACTGAGCAGGACCAAGGAAGAGC  2368

Query 1934  TT------------------------------------------------------------------------  1935
            ||                                                                        
Sbjct 2369  TTTGAAGGCCTGAGGTCTGCGGAAGGTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCCACGC  2442

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2443  CGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTTTTTTTTTTTTTTTAATTTTTTATACTTTGGTGTTTCA  2516

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2517  CTTCATGCTCTGAATACTGAATAACCATGAATGACTGAATAGTTTAGTCCAGATTTTTACAGAGGATACATCTA  2590

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2591  TTTTTATCATTATTTGGGGTTTGAAAAATTTTTTTTTACACCTTCTAATTTCTTTATTTCTCAAAGCAGATAAT  2664

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2665  TCTTCTGTGTGAAAATGTTTTCTTTTTTTAATTTAAGGTTTAAAATTCCTTTTCCAAATCATGTTGATTTTGCT  2738

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2739  CTTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCTGATTGCTTCCTGT  2812

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2813  TGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGGCGGC  2886

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2887  CTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCCCAGGGTGGGCTCAGCTCCAGGGAG  2960

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 2961  AGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAGAAAGGACCCTGGACCCAGAGGC  3034

Query 1936  --------------------------------------------------------------------------  1935
                                                                                      
Sbjct 3035  AGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTGGCAATGGAATAAAACACGATTAAAAACGTTAAGAA  3108

Query 1936  --------  1935
                    
Sbjct 3109  CTGCGTTA  3116

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