Nucleotide Global Alignment

Description

Query:
TRCN0000466600
Subject:
NM_001143935.2
Aligned Length:
1920
Identities:
257
Gaps:
1659

Alignment

Query    1  ATGGAAAATCAATTGGCTAAATCAACTGAAGAACGAACATTTCAGTACCAGGATTCTCTTCCATCACTGCCTGT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAAAATCAATTGGCTAAATCAACTGAAGAACGAACATTTCAGTACCAGGATTCTCTTCCATCACTGCCTGT  74

Query   75  TCCTTCACTTGAAGAATCATTAAAAAAATACCTTGAATC-----------------------------------  113
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct   75  TCCTTCACTTGAAGAATCATTAAAAAAATACCTTGAATCAGTCACCAGAACATGCTACCAGATAAGGGGTCTTG  148

Query  114  -------------------------------------------------AGTGAAACCATTTGCAAATCAAGAA  138
                                                             |||||||||||||||||||||||||
Sbjct  149  ATCCAGATGCTAAGAGAGGGTTCTTGGATCTCACGCGGGAAGGAATTCAAGTGAAACCATTTGCAAATCAAGAA  222

Query  139  GAATATAAGAAAACTGAAGAAATAGTTCAAAAATTTCAAAGTGGGATTGGAGAAAAATTGCACCAGAAATTGCT  212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAATATAAGAAAACTGAAGAAATAGTTCAAAAATTTCAAAGTGGGATTGGAGAAAAATTGCACCAGAAATTGCT  296

Query  213  TGAAAGAGCAAAAGGAAAAAGAAATTGGGT-----ATT----------TGTTG---------------------  250
            ||||||||||||||||||||||||||||.|     |.|          |||||                     
Sbjct  297  TGAAAGAGCAAAAGGAAAAAGAAATTGGCTGGAAGAGTGGTGGCTGAATGTTGCCTATCTGGATGTTCGTATAC  370

Query  251  --TTATAATTGAA-------------------------------------------------------------  261
              |.|.|||||||                                                             
Sbjct  371  CATCACAATTGAATGTCAACTTTGCGGGTCCTGCAGCTCATTTTGAACACTACTGGCCTCCAAAGGAAGGGACT  444

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  445  CAATTAGAAAGAGGAAGTATAACTCTTTGGCATAACTTGAACTACTGGCAGCTATTAAGAAAAGAAAAAGTGCC  518

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  519  TGTTCATAAAGTTGGAAATACTCCTCTAGATATGAATCAATTCCGAATGCTATTTTCTACCTGCAAGGTTCCAG  592

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  593  GAATTACTAGAGACTCCATTATGAATTATTTTAGGACTGAGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTG  666

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  667  CTGTGTCGAGGCCGAGCTTTTGTCTTTGATGTAATACATGAAGGATGTTTGGTCACCCCGCCAGAGCTTCTCAG  740

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  741  ACAACTGACATATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATTAACTAGTGAGG  814

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  815  AGCGAACTCGATGGGCTAAGGCACGAGAATATCTGATTGGTCTTGATCCAGAGAACTTGGCTTTGTTAGAAAAA  888

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  889  ATTCAGAGTAGTTTACTGGTATATTCCATGGAGGATAGCAGTCCACATGTAACACCAGAGGATTATTCTGAGAT  962

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  963  TATTGCAGCCATCCTTATTGGAGATCCAACAGTACGCTGGGGTGACAAATCCTATAACTTGATTTCCTTTTCTA  1036

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1037  ATGGAGTATTTGGCTGTAATTGTGATCATGCTCCTTTTGATGCAATGATTATGGTGAACATCAGTTATTATGTG  1110

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1111  GATGAGAAAATTTTTCAGAATGAAGGAAGATGGAAGGGTTCAGAGAAGGTACGAGATATACCACTTCCAGAAGA  1184

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1185  GCTCATTTTCATTGTGGATGAGAAAGTTTTAAATGACATCAACCAAGCTAAAGCCCAGTATCTCAGGGAGGCAT  1258

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1259  CTGATCTACAGATTGCGGCTTATGCCTTTACATCTTTTGGCAAAAAGCTAACCAAGAACAAGATGCTTCACCCG  1332

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1333  GATACGTTTATTCAGCTTGCACTTCAGCTGGCCTATTACAGACTTCATGGACACCCTGGTTGTTGCTATGAAAC  1406

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1407  AGCTATGACAAGACATTTTTATCATGGCCGTACAGAGACTATGCGATCATGCACAGTTGAAGCAGTGAGGTGGT  1480

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1481  GCCAGTCCATGCAGGATCCTTCTGTCAATCTTCGTGAGCGGCAGCAAAAGATGTTACAAGCTTTTGCAAAGCAT  1554

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1555  AATAAAATGATGAAAGATTGTTCAGCTGGAAAAGGATTTGATCGTCACCTTTTAGGTCTCTTACTCATAGCAAA  1628

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1629  AGAGGAAGGTCTTCCTGTTCCAGAACTCTTTACGGACCCACTTTTTTCCAAAAGCGGAGGAGGTGGAAATTTTG  1702

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1703  TTCTCTCAACAAGTCTGGTTGGCTATTTACGAGTCCAGGGAGTGGTAGTTCCCATGGTACACAATGGTTATGGA  1776

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1777  TTTTTCTACCATATCAGAGATGACAGGTTTGTTGTGGCCTGTTCAGCCTGGAAATCCTGTCCCGAGACTGATGC  1850

Query  262  ----------------------------------------------------------------------  261
                                                                                  
Sbjct 1851  GGAAAAGCTAGTTCAGCTGACTTTTTGTGCTTTTCATGATATGATACAGCTGATGAACTCTACTCATCTT  1920