Nucleotide Global Alignment

Description

Query:
TRCN0000466600
Subject:
XM_011516337.3
Aligned Length:
1752
Identities:
257
Gaps:
1491

Alignment

Query    1  ATGGAAAATCAATTGGCTAAATCAACTGAAGAACGAACATTTCAGTACCAGGATTCTCTTCCATCACTGCCTGT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAAAATCAATTGGCTAAATCAACTGAAGAACGAACATTTCAGTACCAGGATTCTCTTCCATCACTGCCTGT  74

Query   75  TCCTTCACTTGAAGAATCATTAAAAAAATACCTTGAATCAGTGAAACCATTTGCAAATCAAGAAGAATATAAGA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCCTTCACTTGAAGAATCATTAAAAAAATACCTTGAATCAGTGAAACCATTTGCAAATCAAGAAGAATATAAGA  148

Query  149  AAACTGAAGAAATAGTTCAAAAATTTCAAAGTGGGATTGGAGAAAAATTGCACCAGAAATTGCTTGAAAGAGCA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AAACTGAAGAAATAGTTCAAAAATTTCAAAGTGGGATTGGAGAAAAATTGCACCAGAAATTGCTTGAAAGAGCA  222

Query  223  AAAGGAAAAAGAAATTGGGT-----ATT----------TGTTG-----------------------TTATAATT  258
            ||||||||||||||||||.|     |.|          |||||                       |.|.||||
Sbjct  223  AAAGGAAAAAGAAATTGGCTGGAAGAGTGGTGGCTGAATGTTGCCTATCTGGATGTTCGTATACCATCACAATT  296

Query  259  GAA-----------------------------------------------------------------------  261
            |||                                                                       
Sbjct  297  GAATGTCAACTTTGCGGGTCCTGCAGCTCATTTTGAACACTACTGGCCTCCAAAGGAAGGGACTCAATTAGAAA  370

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  371  GAGGAAGTATAACTCTTTGGCATAACTTGAACTACTGGCAGCTATTAAGAAAAGAAAAAGTGCCTGTTCATAAA  444

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  445  GTTGGAAATACTCCTCTAGATATGAATCAATTCCGAATGCTATTTTCTACCTGCAAGGTTCCAGGAATTACTAG  518

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  519  AGACTCCATTATGAATTATTTTAGGACTGAGAGTGAAGGGCGTTCCCCAAACCACATTGTAGTGCTGTGTCGAG  592

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  593  GCCGAGCTTTTGTCTTTGATGTAATACATGAAGGATGTTTGGTCACCCCGCCAGAGCTTCTCAGACAACTGACA  666

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  667  TATATCCACAAGAAGTGCCATAGTGAACCTGATGGACCTGGGATTGCAGCATTAACTAGTGAGGAGCGAACTCG  740

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  741  ATGGGCTAAGGCACGAGAATATCTGATTGGTCTTGATCCAGAGAACTTGGCTTTGTTAGAAAAAATTCAGAGTA  814

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  815  GTTTACTGGTATATTCCATGGAGGATAGCAGTCCACATGTAACACCAGAGGATTATTCTGAGATTATTGCAGCC  888

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  889  ATCCTTATTGGAGATCCAACAGTACGCTGGGGTGACAAATCCTATAACTTGATTTCCTTTTCTAATGGAGTATT  962

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct  963  TGGCTGTAATTGTGATCATGCTCCTTTTGATGCAATGATTATGGTGAACATCAGTTATTATGTGGATGAGAAAA  1036

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1037  TTTTTCAGAATGAAGGAAGATGGAAGGGTTCAGAGAAGGTACGAGATATACCACTTCCAGAAGAGCTCATTTTC  1110

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1111  ATTGTGGATGAGAAAGTTTTAAATGACATCAACCAAGCTAAAGCCCAGTATCTCAGGGAGGCATCTGATCTACA  1184

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1185  GATTGCGGCTTATGCCTTTACATCTTTTGGCAAAAAGCTAACCAAGAACAAGATGCTTCACCCGGATACGTTTA  1258

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1259  TTCAGCTTGCACTTCAGCTGGCCTATTACAGACTTCATGGACACCCTGGTTGTTGCTATGAAACAGCTATGACA  1332

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1333  AGACATTTTTATCATGGCCGTACAGAGACTATGCGATCATGCACAGTTGAAGCAGTGAGGTGGTGCCAGTCCAT  1406

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1407  GCAGGATCCTTCTGTCAATCTTCGTGAGCGGCAGCAAAAGATGTTACAAGCTTTTGCAAAGCATAATAAAATGA  1480

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1481  TGAAAGATTGTTCAGCTGGAAAAGGATTTGATCGTCACCTTTTAGGTCTCTTACTCATAGCAAAAGAGGAAGGT  1554

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1555  CTTCCTGTTCCAGAACTCTTTACGGACCCACTTTTTTCCAAAAGCGGAGGAGGTGGAAATTTTGTTCTCTCAAC  1628

Query  262  --------------------------------------------------------------------------  261
                                                                                      
Sbjct 1629  AAGTCTGGTTGGCTATTTACGAGTCCAGGGAGTGGTAGTTCCCATGGTACACAATGGTTATGGATTTTTCTACC  1702

Query  262  --------------------------------------------------  261
                                                              
Sbjct 1703  ATATCAGAGATGACAGAGAACATCATGAAAGTCTGGAAGGATTACACCAT  1752