Nucleotide Global Alignment

Description

• Query: TRCN0000466745
• Subject: XM_011523544.2
• Aligned Length: 1370
• Identities: 578
• Gaps: 769

Alignment

Query    1  ATGAAGTGTAAGCACTGCACGCGCAAGGAATGTAGTAAGAAAACAAAAACTGATGACCAAGAGAATGTGTCAGC  74
            |||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGTGTGAGCACTGCACGCGCAAGGAATGTAGTAAGAAAACAAAAACTGATGACCAAGAGAATGTGTCAGC  74

Query   75  CGATGCACCGAGTCCAGCCCAGGAAAATGGAG------------------------------------------  106
            ||||||||||||||||||||||||||||||||                                          
Sbjct   75  CGATGCACCGAGTCCAGCCCAGGAAAATGGAGAGAAGGGAGAATTCCACAAGTTGGCTGATGCCAAGATATTTT  148

Query  107  --------------------------------------------------------------------------  106
                                                                                      
Sbjct  149  TGAGCGACTGCCTGGCATGTGACAGCTGTATGACTGCAGAGGAAGGAGTCCAACTTTCCCAGCAAAATGCCAAG  222

Query  107  ----------------------------AGAAATGTGATACCTCAAAGCACAAAGTGCTGGTAGTGTCTGTGTG  152
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACTTCTTCCGCGTTCTGAACCTTAACAAGAAATGTGATACCTCAAAGCACAAAGTGCTGGTAGTGTCTGTGTG  296

Query  153  TCCTCAATCTTTGCCTTATTTTGCTGCTAAATTCAACCTCAGTGTAACTGATGCATCCAGAAGACTCTGTGGTT  226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCCTCAATCTTTGCCTTATTTTGCTGCTAAATTCAACCTCAGTGTAACTGATGCATCCAGAAGACTCTGTGGTT  370

Query  227  TCCTCAAAAGTCTTGGGGTGCACTATGTATTTGATACGACGATAGCTGCGGATTTTAGTATCCTGGAGAGTCAA  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCCTCAAAAGTCTTGGGGTGCACTATGTATTTGATACGACGATAGCTGCGGATTTTAGTATCCTGGAGAGTCAA  444

Query  301  AAAGAATTCGTGCGTCGCTATCGCCAGCACAGTGAGGAGGAACGCACCCTGCCCATGCTGACCTCTGCCTGTCC  374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAGAATTCGTGCGTCGCTATCGCCAGCACAGTGAGGAGGAACGCACCCTGCCCATGCTGACCTCTGCCTGTCC  518

Query  375  TGGCTGGGTCCGATACGCCGAGCGGGTGCTGGGTCGCCCCATCACTGCCCACCTCTGCACCGCCAAGTCCCCCC  448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGGCTGGGTCCGATACGCCGAGCGGGTGCTGGGTCGCCCCATCACTGCCCACCTCTGCACCGCCAAGTCCCCCC  592

Query  449  AGCAGGTCATGGGCTCTTTGGTGAAGGATTATTTCGCCAGACAGCAGAACCTGTCTCCAGAGAAGATTTTCCAC  522
            |||||||||||||||||||||||||||||||||||||||||||||||     |||             ||||||
Sbjct  593  AGCAGGTCATGGGCTCTTTGGTGAAGGATTATTTCGCCAGACAGCAG-----GTC-------------TTCCAC  648

Query  523  GTCATTGTGGCCCCTTGTTATGACAAGAAGCTGGAGGCTCTTCAGGAAAGCCTTCCCCCTGCTTTGCATGGCTC  596
            ||                           ||||                       ||||           |||
Sbjct  649  GT---------------------------GCTG-----------------------CCCT-----------CTC  661

Query  597  CCGGGGCGCTGACTGCGTGTTAACATCAGGTGAAATTGCTCAAATAATGGAGCAAGGTGACCTCTCAGTGAGAG  670
            ||      |||..||                ||    ||.||       ||||.|.|||.||||          
Sbjct  662  CC------CTGGATG----------------GA----GCCCA-------GAGCTATGTGTCCTC----------  692

Query  671  ATGCTGCCGTCGACACTCTGTTTGGAGACTTGAAGGAG--GACAAAGTGACGCGTCATGATGGAGCCAGCTCAG  742
               |||               |.||.|.|.|| |||.|  |.|..||.|||.||.|.|       ||||  |||
Sbjct  693  ---CTG---------------TAGGTGCCATG-AGGGGCAGCCGCAGAGACCCGGCCT-------CCAG--CAG  738

Query  743  ACGGGCACCTGGCACACATCTTCAGACATGCGGCCAAGGAGCTGTTCAACGAGGATGTGGAGGAGGTCACTTAC  816
            .|...||||                                                                 
Sbjct  739  CCTCTCACC-----------------------------------------------------------------  747

Query  817  CGAGCCCTGAGAAACAAAGACTTCCAAGAGGTCACCCTTGAGAAGAACGGAGAGGTGGTGTTACGCTTTGCTGC  890
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query  891  AGCCTATGGCTTTCGAAACATCCAGAACATGATCCTGAAGCTTAAGAAGGGCAAGTTCCCATTCCACTTTGTGG  964
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query  965  AGGTCCTCGCCTGTGCTGGAGGATGCTTAAATGGCAGAGGCCAAGCCCAGACTCCAGACGGACATGCGGATAAG  1038
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1039  GCCCTGCTGCGGCAGATGGAAGGCATTTACGCTGACATCCCTGTGCGGCGTCCGGAGTCCAGTGCACACGTGCA  1112
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1113  GGAGCTGTACCAGGAGTGGCTGGAGGGGATCAACTCCCCCAAGGCCCGAGAGGTGCTGCATACCACGTACCAGA  1186
                                                                                      
Sbjct  748  --------------------------------------------------------------------------  747

Query 1187  GCCAGGAGCGTGGCACACACAGCCTGGACATCAAGTGG  1224
                                                  
Sbjct  748  --------------------------------------  747