Nucleotide Global Alignment

Description

Query:
TRCN0000466777
Subject:
XR_001752566.2
Aligned Length:
2606
Identities:
1067
Gaps:
1538

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTGCCTCTGGCTCTGAGGCGGCGGCGCCGGGCGCTGCGAAGGCTCGGCCGCTGTAGTCAGTGGTGTGGGGTGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAAGGGCACGGACCTCGGAGCTCTCCCCGCTTGCGCCGAGTTTCTCAGCGCCTTCCCCACCCAAACCGGGGTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCAGTCGGAAGCACTCAGAGTGCAGCCCCGCGCGGGGCCGGTCGTAACCGCGCCGCGGGCCGGACGATGCCCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGAAGCTGCTGCTGTTGCCCCCGCCCTCCGCGTCCTCGGCTTTCCGCGTCCCGCGCGCCCGCCCCGTTCCCCCG  296

Query    1  ------ATGAACGCCGCTCGCACCGGCTACCGAGTCTTCTCGGCCAACTCCACGGCCGCCTGCACGGAGCTGGC  68
                  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCGGCCATGAACGCCGCTCGCACCGGCTACCGAGTCTTCTCGGCCAACTCCACGGCCGCCTGCACGGAGCTGGC  370

Query   69  CAAGCGCATCACAGAGCGCCTTGGTGCTGAATTGGGGAAGTCTGTTGTATATCAAGAGACCAATGGAGAAACAA  142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAAGCGCATCACAGAGCGCCTTGGTGCTGAATTGGGGAAGTCTGTTGTATATCAAGAGACCAATGGAGAAACAA  444

Query  143  GAGTTGAAATAAAAGAATCTGTTCGTGGCCAAGATATTTTCATTATACAGACAATACCCAGAGATGTGAATACA  216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAGTTGAAATAAAAGAATCTGTTCGTGGCCAAGATATTTTCATTATACAGACAATACCCAGAGATGTGAATACA  518

Query  217  GCTGTGATGGAGTTGCTCATCATGGCTTACGCACTGAAGACTGCCTGTGCCAGGAACATTATTGGGGTCATCCC  290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTGTGATGGAGTTGCTCATCATGGCTTACGCACTGAAGACTGCCTGTGCCAGGAACATTATTGGGGTCATCCC  592

Query  291  CTACTTCCCCTACAGCAAGCAGAGCAAGATGAGGAAGAGGGGTTCCATTGTGTGCAAGCTGCTAGCATCCATGC  364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTACTTCCCCTACAGCAAGCAGAGCAAGATGAGGAAGAGGGGTTCCATTGTGTGCAAGCTGCTAGCATCCATGC  666

Query  365  TGGCGAAAGCAGGTTTAACTCACATTATCACTATGGATCTTCATCAAAAGGAAATACAAGGCTTTTTCAGCTTT  438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGGCGAAAGCAGGTTTAACTCACATTATCACTATGGATCTTCATCAAAAGGAAATACAAGGCTTTTTCAGCTTT  740

Query  439  CCTGTGGACAACCTTAGAGCCTCACCTTTCCTGCTTCAGTATATCCAGGAAGAAATTCCAAATTACAGAAATGC  512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCTGTGGACAACCTTAGAGCCTCACCTTTCCTGCTTCAGTATATCCAGGAAGAAATTCCAAATTACAGAAATGC  814

Query  513  AGTCATTGTAGCTAAGTCTCCTGATGCTGCAAAGAGGGCCCAGTCCTATGCGGAGAGACTGCGTCTGGGTTTGG  586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGTCATTGTAGCTAAGTCTCCTGATGCTGCAAAGAGGGCCCAGTCCTATGCGGAGAGACTGCGTCTGGGTTTGG  888

Query  587  CCGTCATTCACGGGGAAGCTCAGTGCACGGAACTGGACATGGACGATGGTCGTCACTCCCCGCCTATGGTCAAA  660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CCGTCATTCACGGGGAAGCTCAGTGCACGGAACTGGACATGGACGATGGTCGTCACTCCCCGCCTATGGTCAAA  962

Query  661  AATGCTACTGTGCACCCAGGCCTGGAGTTGCCATTGATGATGGCCAAAGAGAAGCCACCGATAACTGTAGTTGG  734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AATGCTACTGTGCACCCAGGCCTGGAGTTGCCATTGATGATGGCCAAAGAGAAGCCACCGATAACTGTAGTTGG  1036

Query  735  AGATGTTGGAGGCCGCATCGCAATCATCGT--------------------------------------------  764
            ||||||||||||||||||||||||||||||                                            
Sbjct 1037  AGATGTTGGAGGCCGCATCGCAATCATCGTGGTATGGTTATATGTCATCCATGTGCAGAGGTGGCACTCCTGGC  1110

Query  765  --------------------------------------------------------------------------  764
                                                                                      
Sbjct 1111  TCTTGGTCAGTAGGTTGTCCACTCTGGGACTGTATTTCTAGGAACGATGATCCGAATGGATCCATGTATCCTTT  1184

Query  765  --------------------------------------------------------------------------  764
                                                                                      
Sbjct 1185  CTCACCCAAACTCCCTTGTGCCAAGTGGCAGAAACCTGTATCCAGGTGAACATACATTAAAGTATAACCTACAG  1258

Query  765  --------------------------------------------------------------------------  764
                                                                                      
Sbjct 1259  ATAGGAAATGAGCACAGTACTCCCGTGAGAAAATTCAGCACCTTCACCTTCATCATGTGGATTCTAGGTTCTTT  1332

Query  765  --------------------------------------------------------------------------  764
                                                                                      
Sbjct 1333  AAACCAGCTCACCTAATCATGCTTGAGCGTTAGGGCCGAAAGATGAACTGAAGATGAGCTGTTCCGTTTTCACA  1406

Query  765  --------------------------------------------------------------------------  764
                                                                                      
Sbjct 1407  AGTAAGAATGGGTGTCCCCGTGCAGACTCGTTCTGCATGTTGACATACTTTTTTTCCCAGCTCTAAATATCTGC  1480

Query  765  --------------------------------------------------------------------------  764
                                                                                      
Sbjct 1481  TGGCTAGTGGGTCATGAGTCCTTTGCAGTAGCACACTTTATTTCAGTTTTCTTCTCATGTCACAGTCTATTTGA  1554

Query  765  --------------------------------------------------------------------------  764
                                                                                      
Sbjct 1555  AAAAAAAATAAATGGAACGCTGGCTATGTGGGATTCACCAGAAACGTGAGACAGGAAAATGAGTGTTGGCAATC  1628

Query  765  ------------------------------------------------------------GGATGACATTATTG  778
                                                                        ||||||||||||||
Sbjct 1629  CTCAGCTCCAGCCGTAATGTCACAGGTGCTTGACTGCGCCCGCCTCTGACAGACACACAAGGATGACATTATTG  1702

Query  779  ACGATGTGGAGAGTTTTGTTGCTGCCGCGGAGATCCTGAAAGAGAGAGGCGCCTATAAGATCTATGTTATGGCC  852
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  ACGATGTGGAGAGTTTTGTTGCTGCCGCGGAGATCCTGAAAGAGAGAGGCGCCTATAAGATCTATGTTATGGCC  1776

Query  853  ACCCACGGCATCCTGTCTGCAGAGGCCCCTCGCCTGATTGAGGAGTCCTCCGTAGACGAGGTGGTGGTGACGAA  926
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ACCCACGGCATCCTGTCTGCAGAGGCCCCTCGCCTGATTGAGGAGTCCTCCGTAGACGAGGTGGTGGTGACGAA  1850

Query  927  TACTGTCCCTCATGAGGTTCAGAAGCTGCAGTGTCCCAAGATAAAGACTGTGGATATCAGTTTGATTCTTTCTG  1000
            ||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TACTGTCCCTCATGAGGTTCAGAAGCTGCAATGTCCCAAGATAAAGACTGTGGATATCAGTTTGATTCTTTCTG  1924

Query 1001  AAGCCATTCGGAGAATCCACAATGGAGAGTCCATGGCCTACCTTTTCCGAAACATCACTGTGGATGAC------  1068
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1925  AAGCCATTCGGAGAATCCACAATGGAGAGTCCATGGCCTACCTTTTCCGAAACATCACTGTGGATGACTAGCTT  1998

Query 1069  --------------------------------------------------------------------------  1068
                                                                                      
Sbjct 1999  TCACGAGGGTCTCGACCCTGGACCTCCTGAGGGAAACATGGAAAAAGCAGTGCCATGAGTGATACAGTGTTTCC  2072

Query 1069  --------------------------------------------------------------------------  1068
                                                                                      
Sbjct 2073  TTGCAAGGGAGGACTCGAAACAGCCTGGAGTTAGATATCTTCTTTTGCCCGGATTGATGGGGAGGAGGGATTAA  2146

Query 1069  --------------------------------------------------------------------------  1068
                                                                                      
Sbjct 2147  AAGAGTCAGGAAGAAGACAGAGCTAATGGATAAATATCATAACATGGCCTTACATGTCTGCTGTCATCAGCCCT  2220

Query 1069  --------------------------------------------------------------------------  1068
                                                                                      
Sbjct 2221  GTTCCTTAAAAGTTCTAGCTGCTTTCTTAAAAATAATCTGAAAATCTTATTGATACTAAAGAGGAGTTAAAGGC  2294

Query 1069  --------------------------------------------------------------------------  1068
                                                                                      
Sbjct 2295  ACATAAAGTCTTAACTCTATAATGTTCATTTAGTTGTTTCAGCTCCAGGGAAATGGAGGTATTGATGTTGAACC  2368

Query 1069  --------------------------------------------------------------------------  1068
                                                                                      
Sbjct 2369  TGGTTAGGGAAGCTGAGCGCCTGTGGCCCTATTACTATCCAGTTGGCCTCTCCCAAATCAACTTCAAGTCTTTT  2442

Query 1069  --------------------------------------------------------------------------  1068
                                                                                      
Sbjct 2443  ATAGAGAATCGTATTTTTCTTTCAGAAATTGTTATGCCTACAGCCATTGAAAAATGAAGCATTCATGTTGTTAC  2516

Query 1069  --------------------------------------------------------------------------  1068
                                                                                      
Sbjct 2517  ATCTTCCAAGGATGTCAGATTAGAAAATAGCATCCCACCTCTGGGTATCTGAGTGGCTCTGAAGTTGCAAATAA  2590

Query 1069  ----------------  1068
                            
Sbjct 2591  AATAATTTGTTGTCTT  2606

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